Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq7894 104 5e-17 seq175855 100 7e-16 seq47065 100 7e-16 >seq7894 Length=2644 Score = 104 bits (114), Expect = 5e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 ||||| |||||||| || |||||||| | || || | ||| ||||| | ||| || Sbjct 2507 GTAGATTCTTTTTGAATATTGTAATCAGACAATGTGCGCCCGTCTTCCAATTGTTTGCCA 2448 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 |||||||| | | || || || | | |||||||||||| ||||||||||| ||| Sbjct 2447 GCGAAGATTAAACGTTGTTGATCTGGAGGGATTCCTTCCTTGTCTTGAATTTTAGCTTTA 2388 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 ||| | || | | || ||| ||| || || | ||| || |||||||| || || ||| Sbjct 2387 ACATTTTCAATAGTATCGGAAGGCTCAACCTCTAAAGTGATGGTTTTGCCAGTCAGTGTC 2328 Query 152088 TTCACGAAGACCTGCAT 152104 || || |||| ||||| Sbjct 2327 TTGACAAAGATTTGCAT 2311 Score = 95.1 bits (104), Expect = 3e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | |||||| || || || ||||| || || ||||||| ||||| | || ||| Sbjct 2294 AGAACCAAATGAAGTGTTGATTCCTTTTGAATATTATAATCGGACAAAGTGCGTCCGTCT 2235 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | ||| ||||| || || | | || || || | | ||| || ||||| ||| Sbjct 2234 TCCAATTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGGGATACCCTCCTTATCT 2175 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 |||||||| ||||| |||| | | || ||| || || || | || || || Sbjct 2174 TGAATTTTAGCCTTGACGTTCTCAATAGTATCAGAAGGTTCGACCTCTAAGGTGATGGTC 2115 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||||| || | |||||||||||||| ||||||||| Sbjct 2114 TTGCCAGTTAAAGTCTTCACGAAGATCTGCATTTT 2080 >seq175855 Length=19510 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || | ||| | ||| || || |||||||||||||| |||| || || | ||||| Sbjct 16639 GAGAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCATC 16580 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| | || || |||||||| | | || || || | | ||| ||||| || || Sbjct 16579 TTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGGGGGATACCTTCTTTGTC 16520 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| ||||| |||||| | || | |||| ||| ||| ||||| | || || || Sbjct 16519 TTGGATTTTAGCCTTGACATTTTCAATAGTGTCGGAAGGCTCAACTTCCAAGGTGATGGT 16460 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || ||||| || ||||||| |||||| Sbjct 16459 TTTACCAGTTAGAGTTTTGACGAAGATCTGCAT 16427 >seq47065 Length=7920 Score = 100 bits (110), Expect = 7e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| | ||| || || ||||||||||||||||||| || || | |||||||| | Sbjct 2858 ATGCAAAGTTGATTCCTTTTGGATGTTGTAATCGGATAGGGTACGTCCATCTTCCAATTG 2799 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || || || || || | ||||| || | | ||||| || || || ||||| || Sbjct 2798 TTTTCCAGCAAAAATTAGACGTTGCTGATCTGGTGGAATTCCCTCTTTGTCCTGAATCTT 2739 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||||||| | || | | || ||| || || ||||| ||||| || |||||||| Sbjct 2738 GGCTTTGACATTTTCGATAGTATCAGAAGGTTCGACCTCAAGTGTAATGGTCTTGCCCGT 2679 Query 152081 GAGAGTCTTCACGAAGACCTGCATT 152105 || ||||| || || | ||||||| Sbjct 2678 TAGGGTCTTTACAAAAATCTGCATT 2654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151095537648837