Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10]
4,523 sequences; 239,677,193 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq3112 107 1e-18
>seq3112
Length=543522
Score = 107 bits (118), Expect = 1e-18
Identities = 165/230 (72%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461
||||| || |||||||| ||||| || || || || || || ||||| || |||||||||
Sbjct 484764 TATTCAGCACCAAAATGTCTCCACTGAAAGCCGTAGACTGGCCCAAGATCGCCTTCTTCT 484823
Query 97462 CTATCACAGAAACC-AAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTG 97520
|||||| ||||| ||| | ||||| | || | ||| | || || | |||||| |
Sbjct 484824 CTATCAGTAAAACCGCAGC-TGTCTAAGAATGATCGAGAACTGTTGGCGTTCCAAATTTT 484882
Query 97521 CACACCAGATGCT-GCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATT 97579
||||| | || | || ||| || ||| || |||||||| || ||||| | | ||
Sbjct 484883 TACACC-TCTACTCGAGAGATCTCTGGCGTCCGTTGATCCTCTAATGAACCATAGAAGTT 484941
Query 97580 CTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAAA 97629
|||| ||||| || | ||| || || | || || || ||||| ||||||
Sbjct 484942 CTTCGACAACGCCACGCCAGAAGACACATTTTGTAGTCAAGAGTGGAAAA 484991
Score = 87.8 bits (96), Expect = 1e-12
Identities = 137/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176
||||||||||| | |||| |||| | ||||||||| || ||||||||||| || | ||
Sbjct 484206 GTGACATGGGCCAACATATAAGTGAGTAGAGAATAACTGGCAATGTTAAAGGGAATACCC 484265
Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236
|| |||||||| | | || || || ||| || | | |||| | |||| ||
Sbjct 484266 AGACCCATATCCCCGCTCCGCTGGTACAATAAACACGATAATTCGCCATTAGACACGTAC 484325
Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAA 97296
|||||| || ||| || || || || |||||| |||| | ||| | ||||||
Sbjct 484326 AACTGAACCAGACAATGGCAAGGTGGTAAAGCCATTATTGGGATATCCACTGGATTCCAG 484385
Query 97297 GCACACATCAACATTC 97312
|||||||| | ||||
Sbjct 484386 GCACACATTATGATTC 484401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346764883857110
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |