Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10]
4,523 sequences; 239,677,193 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq3919 82.4 7e-11
>seq3919
Length=163912
Score = 82.4 bits (90), Expect = 7e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 16259 TCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTA 16318
|||||||| || | |||||| || || ||||||||||| | ||| || |||||
Sbjct 142215 TCGTCCCTGGAAATGAGCTCGTTGCTGAAGGTCAGACCTGGCATCAATCCACGCTTTTTG 142274
Query 16319 ATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCA 16378
| ||| ||||| | ||| || ||| ||||| || ||||| ||||| ||||| |||
Sbjct 142275 AGCCAGAATATGGAGGCGAAACTTCCACTGAAGAAGATCCCTTCGACTGCTGCAAAGGCA 142334
Query 16379 ACCAATCGCTCACCGTACGTTCTAtttttactttctatccattttttagcccaatttgct 16438
|| | |||||||||| | || | | | | | |||||| || ||||| |||||
Sbjct 142335 ACGACTCGCTCACCGAAGTTTGCACTGTCGTTGTTTATCCAGTTCAGCGCCCAGTTTGCC 142394
Query 16439 ttttgtttAACACAGTTCATGTTCTCTATTGCATTAAA 16476
|| | |||||| | ||| || || ||||| ||
Sbjct 142395 TTCTTAGCGACACAGGGAAGGTTTTCAATGGCATTGAA 142432
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462485850727800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |