Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10]
4,523 sequences; 239,677,193 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq3112 86.0 5e-12
>seq3112
Length=543522
Score = 86.0 bits (94), Expect = 5e-12
Identities = 177/261 (68%), Gaps = 2/261 (1%)
Strand=Plus/Minus
Query 20044 TTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGG 20103
||||| | || ||||| ||| | || || ||| |||||||| ||||| | |||||
Sbjct 484990 TTTCCACTCTTGACTACAAAATGTGTCTTCTGGCGTGGCGTTGTCGAAGAACTTCTATGG 484931
Query 20104 TTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAA-AGGAGTTAAGATTTGGAG 20162
|| |||| ||||||||| | | | || || | || | ||| || || |||||||
Sbjct 484930 TTCATTAGAGGATCAACGGACGCCAGAGATCTC-TCGAGTAGAGGTGTAAAAATTTGGAA 484872
Query 20163 CGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAGAGGGGGA 20222
||| | | ||| ||| ||| ||||| || ||| | | |||| || ||
Sbjct 484871 CGCCAACAGTTCTCGATCATTCTTAGACAGCTGCGGTTTTACTGATAGAGAAGAAGGCGA 484812
Query 20223 TTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAA 20282
| | || || || || || ||||| |||||||||||||| |||||||| || ||| |
Sbjct 484811 TCTTGGGCCAGTCTACGGCTTTCAGTGGAGACATTTTGGTGCTGAATACAAAGATATGCA 484752
Query 20283 CACAAATTATTTTGGACAAGG 20303
||| ||||| ||| ||||
Sbjct 484751 TACAGATTATACAGGAAAAGG 484731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399161995356235
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |