Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10] 4,523 sequences; 239,677,193 total letters Query= NC_006649.1 Length=32108 Score E Sequences producing significant alignments: (Bits) Value seq71 105 1e-18 >seq71 Length=42948 Score = 105 bits (116), Expect = 1e-18 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 6088 AATTAATAGTAATAAAAGTATAGTCCAGCTACACAATAGTTGTATCGTAAATTTTCCCAG 6147 ||||| | ||||| |||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct 5154 AATTATTGGTAATGAAAGTATAGTCCAGCTTCACAATAGTTGTATCATAAATTTTCCCAG 5213 Query 6148 AAGGTTTTTTCCGTGT 6163 || |||||||||||| Sbjct 5214 AAATTTTTTTCCGTGT 5229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 102618488000820