Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10] 4,523 sequences; 239,677,193 total letters Query= NC_008899.1 Length=2879 Score E Sequences producing significant alignments: (Bits) Value seq481 84.2 4e-13 >seq481 Length=28765 Score = 84.2 bits (92), Expect = 4e-13 Identities = 91/117 (78%), Gaps = 3/117 (3%) Strand=Plus/Minus Query 643 CTGGTGACCGTGCTAGAGCTAAATCGTATTTCTACCAGAGGATTTAGGT-CGA-TAATAA 700 |||||||||||||| |||| ||||| ||||||||| || ||| | || Sbjct 1776 CTGGTGACCGTGCTTGAGCGTGCTCGTACGATCACCAGAGGAGACGAGTACGAATCCTAC 1717 Query 701 CTGTATTGGCG-AAGGTTTTCTGCAGTTTCCCTTCGCCCTCGGCAAATGCGATACAG 756 |||||| | || ||||||||||||||||||||| ||||| |||| |||||||||||| Sbjct 1716 CTGTATCGACGGAAGGTTTTCTGCAGTTTCCCTCCGCCCGCGGCGAATGCGATACAG 1660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9100349780580