Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10] 4,523 sequences; 239,677,193 total letters Query= NC_008981.1 Length=4495 Score E Sequences producing significant alignments: (Bits) Value seq706 145 2e-31 >seq706 Length=18111 Score = 145 bits (160), Expect = 2e-31 Identities = 136/171 (80%), Gaps = 9/171 (5%) Strand=Plus/Plus Query 872 TATTTCCACTATGTTTTCCACTCTACACTGTGAACCTACATTTTTCACGTAGGTTCCGAA 931 |||||||||| |||||||| | |||| || |||||||||||| |||| ||||||||| Sbjct 4946 TATTTCCACT--GTTTTCCATCATCCACTATGGACCTACATTTTTAACGTGGGTTCCGAA 5003 Query 932 CCACA------ACAATTTAAAAACACTTGGAAAAATGCATTGGTGTCGGCGGGAGTCGAA 985 ||||| ||| || | ||||| ||||||| ||||||||||||||||| ||||| Sbjct 5004 CCACAGAGAGTACAGCTTGGGA-CACTTAGAAAAATCCATTGGTGTCGGCGGGAATCGAA 5062 Query 986 CCCGCGCTCACTGGTCGTGAGCCGTGCACGTTACCACTGTTTCACTGCCTC 1036 |||| |||| |||| | |||||| || | |||||||||| ||||||||| Sbjct 5063 CCCGGGCTCGCTGGGTGGGAGCCGGGCCCATTACCACTGTGCCACTGCCTC 5113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14271293959700