Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10] 4,523 sequences; 239,677,193 total letters Query= NC_008994.1 Length=5579 Score E Sequences producing significant alignments: (Bits) Value seq4134 475 1e-130 seq1091 459 9e-126 seq1713 365 2e-97 seq3610 354 3e-94 seq3835 306 1e-79 seq3465 289 1e-74 seq2001 232 2e-57 seq203 125 3e-25 >seq4134 Length=103268 Score = 475 bits (526), Expect = 1e-130 Identities = 469/603 (78%), Gaps = 5/603 (1%) Strand=Plus/Plus Query 857 ACTTCTGAGACTAAAATCGCAATGCATCCAGAAGAAGACGCAGCAGAATCAGGGGGCCCA 916 ||| ||||||||||||||||| || ||||||||||| || | |||||| ||||||| Sbjct 4376 ACTCCTGAGACTAAAATCGCAGTGAATCCAGAAGAACACATAA---AATCAGCGGGCCCA 4432 Query 917 TCGGTGCAGCCGTATTTTCTGATAAAGGAGGTGTTACCTACGGACCTAATACTCCACATC 976 | || || ||||||| |||||| |||||||||||||||| ||||||||| || || || Sbjct 4433 TGGGAGCTGCCGTATCTTCTGAAAAAGGAGGTGTTACCTGTCGACCTAATAATCTACCTC 4492 Query 977 GGTAACTTCATGAAGTTTGTAGATTATGTGCGCTTCATACGAGTCTTGTGGCCTAACAAT 1036 |||||||||| | ||| | ||||| || ||| |||||||| |||| |||||||| || Sbjct 4493 GGTAACTTCACGGAGTCCGAAGATTCTGCAAGCTCCATACGAGGCTTGGGGCCTAACCAT 4552 Query 1037 GACGAAGACGAATCG-GTGCGGATGAAATTGTGGAAGATGTCTACCCACCGTTTGCGCAG 1095 |||||||||| |||| | || ||| |||||||||||| |||||||||||| ||||||| Sbjct 4553 GACGAAGACGCATCGACTCCGCATG-AATTGTGGAAGAAGTCTACCCACCGGTTGCGCAT 4611 Query 1096 TGAGTTTATGAATGGCAAATATCTTGAAATAGAGTATAATTATGATCACACCAGGATCGA 1155 ||| ||||| |||||||| |||| ||| ||||||| |||| || | |||| |||| || Sbjct 4612 TGAATTTATAAATGGCAAGCATCTGGAAGTAGAGTAAAATTTCGAACGCACCGGGATAGA 4671 Query 1156 AGAACAGCGGGTGCTTATCAACGTCAACACTTTGCTGCCGGTGTTAGGCAGCGTGATCCC 1215 ||| ||||| | | |||||||| ||||||||| |||||||||| || | || | || Sbjct 4672 TGAAGAGCGGATTCGCATCAACGTAAACACTTTGTTGCCGGTGTTTGGTTGATTGTTACC 4731 Query 1216 TCCGGACATGGAAACCTTCGTGGACGTGAAGAGGCTTTTGGCTTTTGTGGAGGCGACCGT 1275 ||| | || |||||||||||||||||| | | ||| | |||| |||||| || | | Sbjct 4732 TCCAGGCACAGAAACCTTCGTGGACGTGGAAAAGCTCGTCACTTTCGTGGAGACGTACCT 4791 Query 1276 TCGTTTAAACGGGTGTTGCGGCCATAATAACGCGTCCTGTCCGTGCCATTTGAATGTCGA 1335 || ||| ||| |||| || ||| || | |||||||| ||||||||| ||||||| Sbjct 4792 TCATTTGAACAAGTGTAACGACCAACGATACACCTCCTGTCCCTGCCATTTGGATGTCGA 4851 Query 1336 GCCTCAGGATGCCGGATATTTTGTACCGCCTTCAGAGAACGGATGTAAGGACGGCCACTT 1395 ||| || || | | | ||| |||| || |||| |||| |||| | ||||||| | Sbjct 4852 CCCTGAGACCGCTGCAAAGCTTGAACCGTCTCCAGACAACGCATGTGCAGCCGGCCACGT 4911 Query 1396 CCATCACTTCTGCGCGCAGCATGTGAATTACTGGTTGTCAAGCGTCTTGGAGTTCTCAAT 1455 ||||||||||||| ||||||||||||||||||||||| |||||||||| || || Sbjct 4912 CCATCACTTCTGCTTTCAGCATGTGAATTACTGGTTGTCGGACGTCTTGGAGCCTTCGAT 4971 Query 1456 CAA 1458 ||| Sbjct 4972 CAA 4974 Score = 298 bits (330), Expect = 2e-77 Identities = 288/364 (79%), Gaps = 7/364 (2%) Strand=Plus/Plus Query 262 GGAATACATATTG--TATGTATAATGATAAATGTAAAGCGCA--GTTTCCATACGTTTTC 317 |||| | |||| | |||||||||||| || | | | | || ||| || || ||||| Sbjct 3739 GGAAAAGATATGGAATATGTATAATGACAAGTATTATCCTCATGGTTCTCAGACTTTTTC 3798 Query 318 GTGCGTTTTGTATTTCTTAACAAAAAGTTTAAAACATTTTTATTATTTC-AACTTGCTCA 376 |||| |||||||| ||| ||| ||||| ||| ||||| ||||||| ||| |||||| Sbjct 3799 -TGCGCATTGTATTTTCTAATAAAGAGTTTGAAATATTTTGATTATTTTGAACCTGCTCA 3857 Query 377 CCAGCGTTTACGGCACACAGCTTGCCTGCCGTTGCTTGGCGGCCGTGCTCGGGTCATGCC 436 |||| || ||||||| |||||||||||||||||||| || ||||||||||||| | | Sbjct 3858 CCAGAATTCACGGCACCCAGCTTGCCTGCCGTTGCTTCGCAGCCGTGCTCGGGTGACGGT 3917 Query 437 AGTGTGCATTTTTGTAAAACAGCATGATGAGGTGCTCCAGTTGGCTACGACAACCAACGG 496 |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct 3918 AGTGTGCATTTTTGTAAAACAGCATGATGAGGTGCTCCAGTTCGCTATGACAACCAACGG 3977 Query 497 TCATAAACTTGTTGACAATGCGTCATTC-TAGTCGAGCGTCAAATACGTAGGCGCCAGTA 555 |||| |||| ||||||||||| | | | | || | || || |||||| | | || || Sbjct 3978 TCATGAACTCGTTGACAATGCACCGTCCTTGGTATCGTGTGAAGTACGTAAGGGTCATTA 4037 Query 556 ACTTTTGCATGTTTAGTAGCAATAAATTTCCTTGTTTAACGAGACAATGTAATTGTTGGG 615 || |||||| || ||||||||| | | ||| ||||| || |||||||||||| || Sbjct 4038 ACGTTTGCAATTTCGGTAGCAATAGAATGCCTCTTTTAATAGGAAAATGTAATTGTTAGG 4097 Query 616 GTCG 619 |||| Sbjct 4098 GTCG 4101 Score = 93.3 bits (102), Expect = 1e-15 Identities = 97/128 (76%), Gaps = 11/128 (9%) Strand=Plus/Plus Query 5185 AGCCGCATTCCATATTTTCAAAGTGGTAGCCGCGCCACTTCGCCATATTTGCTCGAGAGT 5244 ||||| ||||| ||||||||||||||||||| ||||||| | ||| |||||| Sbjct 3351 AGCCGTATTCCGTATTTTCAAAGTGGTAGCCACGCCACTCC---------GCTGGAGAGT 3401 Query 5245 GCTCTGAATATCGACACAGTGTGGGGTGGA--ATGGCTTATTATGATGAAGATGGAAGAC 5302 |||||| || |||||||| || ||||| || |||||| ||||||| | | | ||| Sbjct 3402 GCTCTGGATTTCGACACATCGTTCTGTGGAATATAGCTTATGATGATGACGCTTGTTGAC 3461 Query 5303 TGATTGAT 5310 ||||| || Sbjct 3462 TGATTAAT 3469 >seq1091 Length=38165 Score = 459 bits (508), Expect = 9e-126 Identities = 449/579 (78%), Gaps = 5/579 (1%) Strand=Plus/Plus Query 857 ACTTCTGAGACTAAAATCGCAATGCATCCAGAAGAAGACGCAGCAGAATCAGGGGGCCCA 916 ||| ||||||||||||||||| || ||||||||||| ||| | |||||| ||||||| Sbjct 2417 ACTCCTGAGACTAAAATCGCAGTGAATCCAGAAGAACACGTAA---AATCAGCGGGCCCA 2473 Query 917 TCGGTGCAGCCGTATTTTCTGATAAAGGAGGTGTTACCTACGGACCTAATACTCCACATC 976 || || |||||||||| ||| |||||||||||||||| ||||||||| || || || Sbjct 2474 CGGGAGCTGCCGTATTTTGTGAAAAAGGAGGTGTTACCTGTCGACCTAATAATCTACCTC 2533 Query 977 GGTAACTTCATGAAGTTTGTAGATTATGTGCGCTTCATACGAGTCTTGTGGCCTAACAAT 1036 | |||||||||| ||| | ||||| | ||| || ||||| |||| |||||||| || Sbjct 2534 GTTAACTTCATGGAGTCCGAAGATTCYGCAAGCTCCAAACGAGGCTTGGGGCCTAACCAT 2593 Query 1037 GACGAAGACGAATCG-GTGCGGATGAAATTGTGGAAGATGTCTACCCACCGTTTGCGCAG 1095 || ||||||| |||| | || || |||||| |||||| |||||||||||| ||||||| Sbjct 2594 GAYGAAGACGCATCGACTCCGCAT-AAATTGCGGAAGAAGTCTACCCACCGGTTGCGCAT 2652 Query 1096 TGAGTTTATGAATGGCAAATATCTTGAAATAGAGTATAATTATGATCACACCAGGATCGA 1155 ||| ||||| ||| |||| |||| ||| ||||||| | || || |||| |||| || Sbjct 2653 TGAATTTATAAATAGCAAGCATCTGGAAGTAGAGTACATTTTCGAATGCACCGGGATAGA 2712 Query 1156 AGAACAGCGGGTGCTTATCAACGTCAACACTTTGCTGCCGGTGTTAGGCAGCGTGATCCC 1215 ||| | ||| | | |||||||| ||||||||| |||||||||| || | || | || Sbjct 2713 TGAAGAACGGATTCGCATCAACGTAAACACTTTGTTGCCGGTGTTTGGTGGATTGTTACC 2772 Query 1216 TCCGGACATGGAAACCTTCGTGGACGTGAAGAGGCTTTTGGCTTTTGTGGAGGCGACCGT 1275 ||| | || ||||||||||||||||||| ||| ||| | |||| |||||| || ||| Sbjct 2773 TCCAGGCACGGAAACCTTCGTGGACGTGGAGAAGCTYGTCACTTTCGTGGAGACGYACGT 2832 Query 1276 TCGTTTAAACGGGTGTTGCGGCCATAATAACGCGTCCTGTCCGTGCCATTTGAATGTCGA 1335 || ||| ||| |||| || ||| |||| |||||||| ||||||||| ||||||| Sbjct 2833 TCATTTGAACAAGTGTAACGACCAACGATACGCCTCCTGTCCCTGCCATTTGRATGTCGA 2892 Query 1336 GCCTCAGGATGCCGGATATTTTGTACCGCCTTCAGAGAACGGATGTAAGGACGGCCACTT 1395 ||| || || | | | ||| |||| || |||| |||| |||| | ||||||||| Sbjct 2893 CCCTGAGAYCGCTGCAAAGYTTGAACCGTCTCCAGACAACGCATGTGCAGCCGGCCACTT 2952 Query 1396 CCATCACTTCTGCGCGCAGCATGTGAATTACTGGTTGTC 1434 ||||||||||||| ||||||||||||||||||||||| Sbjct 2953 CCATCACTTCTGCTTCCAGCATGTGAATTACTGGTTGTC 2991 Score = 304 bits (336), Expect = 5e-79 Identities = 289/364 (79%), Gaps = 7/364 (2%) Strand=Plus/Plus Query 262 GGAATACATATTGTAT--GTATAATGATAAATGTAAAGCGCA--GTTTCCATACGTTTTC 317 |||| | |||| | || |||| |||| || | | | | || ||| || || ||||| Sbjct 1784 GGAACATATATGGAATACGTATCATGAAAAGTATTATCCTCATGGTTCTCAAACTTTTTC 1843 Query 318 GTGCGTTTTGTATTTCTTAACAAAAAGTTTAAAACATTTTTATTATTTC-AACTTGCTCA 376 |||| |||||||| ||| ||| ||||| ||| ||||| ||||||| ||| |||||| Sbjct 1844 -TGCGCATTGTATTTTCTAATAAAGAGTTTGAAATATTTTGATTATTTTGAACCTGCTCA 1902 Query 377 CCAGCGTTTACGGCACACAGCTTGCCTGCCGTTGCTTGGCGGCCGTGCTCGGGTCATGCC 436 |||| || ||||||| ||| ||||||||||||||||||| ||||||||||||| ||| Sbjct 1903 CCAGAATTCACGGCACCCAGYTTGCCTGCCGTTGCTTGGCAGCCGTGCTCGGGTRATGGT 1962 Query 437 AGTGTGCATTTTTGTAAAACAGCATGATGAGGTGCTCCAGTTGGCTACGACAACCAACGG 496 || |||||||||||||||||||||||||||| |||||||||| |||| |||||||||||| Sbjct 1963 AGCGTGCATTTTTGTAAAACAGCATGATGAGATGCTCCAGTTCGCTATGACAACCAACGG 2022 Query 497 TCATAAACTTGTTGACAATGCGTCATTC-TAGTCGAGCGTCAAATACGTAGGCGCCAGTA 555 |||| |||| |||||||||||| | | | | || | || || |||||| | | || || Sbjct 2023 TCATGAACTCGTTGACAATGCGCCGTCCTTGGTATCGTGTGAAGTACGTAAGGGTCATTA 2082 Query 556 ACTTTTGCATGTTTAGTAGCAATAAATTTCCTTGTTTAACGAGACAATGTAATTGTTGGG 615 || |||||| |||| ||||||||||| | ||| ||||| || |||||||||||| || Sbjct 2083 ACGTTTGCAAGTTTGGTAGCAATAAAATGCCTCTTTTAATAGGAAAATGTAATTGTTAGG 2142 Query 616 GTCG 619 |||| Sbjct 2143 GTCG 2146 Score = 201 bits (222), Expect = 4e-48 Identities = 220/293 (75%), Gaps = 20/293 (7%) Strand=Plus/Plus Query 1894 AGATTACAGTGAGGCCCCTAAGAATTG-ACTAAGTCTGCGAACTTGTAAGAACACCAGCA 1952 ||||||||||||| | |||||| || |||||||| || || || ||||| | |||| Sbjct 7987 AGATTACAGTGAGATCTCTAAGAGTTTTACTAAGTCCGCAAAGTTATAAGAGCGAGAGCA 8046 Query 1953 AGACGAACGAAGCACTTTGGTGCCTTCACATCTGGAGCCACATCTAATCATAGGTAAATC 2012 ||| |||||| || ||||| || ||||| |||| |||||||| ||| |||| |||||||| Sbjct 8047 AGAAGAACGAGGCGCTTTGCTGTCTTCAGATCTTGAGCCACAACTAGTCATTGGTAAATC 8106 Query 2013 ATACGCAGCCGCTGTAGTTCTTAGAGCCC---CCT------TACCCCTGTACC------- 2056 |||| |||||||| ||||| || || | ||| | |||||| ||| Sbjct 8107 ATACACAGCCGCTACAGTTCCTATAGTTCTTACCTGATTCCTCCCCCTGCACCTCCCCCT 8166 Query 2057 ---CCCTTCATGCCCGTGTCCTGTCGTTTCGCTGTTACGAGGTCCCAGGAATAAATGAAA 2113 | ||| ||| || ||| |||||| | || | ||||||||||| ||||| |||| Sbjct 8167 GCACTCTTTATGAYCGCTTCCCATCGTTTTGAMGTCATGAGGTCCCAGGTATAAACGAAA 8226 Query 2114 AAGCACATAGTTTATAGATCAATTTATTTTAAAATACGAGTAGATGGGAGGTA 2166 ||||||| || ||||||||||||||||| ||||||||||||||||| |||| Sbjct 8227 GAGCACATGTTTGATAGATCAATTTATTTTTAAATACGAGTAGATGGGCGGTA 8279 >seq1713 Length=277947 Score = 365 bits (404), Expect = 2e-97 Identities = 448/610 (73%), Gaps = 12/610 (2%) Strand=Plus/Plus Query 1027 GCCTAACAATGACGAAGACGAATCG-GTGCGGATGAAATTGTGGAAGATGTCTACCCACC 1085 ||||||| |||||||||||| |||| | || || |||||| |||||| ||||||||||| Sbjct 16099 GCCTAACTATGACGAAGACGCATCGACTCCGCAT-AAATTGCGGAAGAAGTCTACCCACC 16157 Query 1086 GTTTGCGCAGTGAGTTTATGAATGGCAAATATCTTGAAATAGAGTATAATTATGATCACA 1145 | ||||||| ||| ||||| |||||||| || | ||| || |||| |||| || | || Sbjct 16158 GGTTGCGCATTGAATTTATAAATGGCAAGCATSTGGAAGTARAGTAMAATTKCGAACGCA 16217 Query 1146 CCAGGATCGAAGAACAGCGGGTGCTTATCAACGTCAACACTTTGCTGCCGGTGTTAGGCA 1205 || |||| || ||| ||||| | | |||||||| ||||||||| |||||||||| || | Sbjct 16218 CCGGGATAGATGAAGAGCGGATTCGCATCAACGTAAACACTTTGTTGCCGGTGTTTGGTA 16277 Query 1206 GCGTGATCCCTCCGGACATGGAAACCTTCGTGGACGTGAAGAGGCTTTTGGCTTTTGTGG 1265 | || | ||||| | || ||||||||||||| ||||| ||| ||| | |||| |||| Sbjct 16278 GATTGTTACCTCCAGGCACGGAAACCTTCGTGAACGTGGAGAAGCTCGTCACTTTCGTGG 16337 Query 1266 AGGCGACCGTTCGTTTAAACGGGTGTTGCGGCCATAATAACGCGTCCTGTCCGTGCCATT 1325 || || ||||| ||| ||| |||| || ||| |||| |||||||| ||||||| Sbjct 16338 AGACGTACGTTCATTTGAACAAGTGTAACGACCAACGATACGCCTCCTGTCCCTGCCATT 16397 Query 1326 TGAATGTCGAGCCTCAGGATGCCGGATATTTTGTACCGCCTTCAGAGAACGGATGTAAGG 1385 || ||||||| ||| || || | | | | | |||| || |||| |||| |||| | Sbjct 16398 TGGATGTCGACCCTGAGAYCGCTGCAAAGYTYGAACCGTCTCCAGACAACGCATGTGCAG 16457 Query 1386 ACGGCCACTTCCATCACTTCTGCGCGCAGCATGTGAATTACTGGTTGTCAAGCGTCTTGG 1445 |||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct 16458 SCGGCCACTTCCATCACTTCTGCTTCCAGCATGTGAATTACTGGTTGTCGGACGTCTTGG 16517 Query 1446 AGTTCTCAATCAAAAATTTGG---AAGAAGGGTCATTCAATGAACAAGCCACCTCCAAAT 1502 || || ||||| ||||| ||| |||||| || |||| | || ||| | | Sbjct 16518 AGCCTTCGATCAAGCTTTTGGGTAAAGGCGGGTCACACATTGAAAATCGCATCTCGAGCT 16577 Query 1503 TTGTTGGTATTTTGGCTAATACAGTTTACTTCCGACACGACGGGCAACCTCTGCTTCGGT 1562 | | |||||||| | || ||||||||||| || ||| ||| || | ||| Sbjct 16578 TGAATTTTATTTTGGGAGTTGCAATTTACTTCCGA---GATGGGGAACAGATGTTCCGGG 16634 Query 1563 CAAGCCACTTATACAGAGTCATCTAAGAATTGTAACAGTGATACACGGTATATAGTGATG 1622 | |||| || | || | | || |||| ||| |||||||| || | | ||||| Sbjct 16635 CGAGCCGCTCACACCCACGCCTCCGAGAAATGTCACAGTGATTTACAG----CACTGATG 16690 Query 1623 GTGAATATGT 1632 |||||||||| Sbjct 16691 GTGAATATGT 16700 >seq3610 Length=1450 Score = 354 bits (392), Expect = 3e-94 Identities = 428/582 (74%), Gaps = 8/582 (1%) Strand=Plus/Plus Query 1027 GCCTAACAATGACGAAGACGAATCG-GTGCGGATGAAATTGTGGAAGATGTCTACCCACC 1085 ||||||| |||||||||||| |||| | || || |||||| |||||| ||||||||||| Sbjct 685 GCCTAACTATGACGAAGACGCATCGACTCCGCAT-AAATTGCGGAAGAAGTCTACCCACC 743 Query 1086 GTTTGCGCAGTGAGTTTATGAATGGCAAATATCTTGAAATAGAGTATAATTATGATCACA 1145 ||||||| ||| ||||| |||||||| || | ||| || |||| |||| || | || Sbjct 744 RGTTGCGCATTGAATTTATAAATGGCAAGCATSTGGAAGTARAGTAMAATTKCGAACGCA 803 Query 1146 CCAGGATCGAAGAACAGCGGGTGCTTATCAACGTCAACACTTTGCTGCCGGTGTTAGGCA 1205 || |||| || ||| ||||| | | |||||||| ||||||||| |||||||||| || | Sbjct 804 CCGGGATAGATGAAGAGCGGATTCGCATCAACGTAAACACTTTGTTGCCGGTGTTTGGTA 863 Query 1206 GCGTGATCCCTCCGGACATGGAAACCTTCGTGGACGTGAAGAGGCTTTTGGCTTTTGTGG 1265 | || | ||||| | || ||||||||||||| ||||| ||| ||| | |||| |||| Sbjct 864 GATTGTTACCTCCAGGCACGGAAACCTTCGTGAACGTGGAGAAGCTCGTCACTTTCGTGG 923 Query 1266 AGGCGACCGTTCGTTTAAACGGGTGTTGCGGCCATAATAACGCGTCCTGTCCGTGCCATT 1325 || || ||||| ||| ||| |||| || ||| |||| |||||||| ||||||| Sbjct 924 AGACGTACGTTCATTTGAACAAGTGTAACGACCAACGATACGCCTCCTGTCCCTGCCATT 983 Query 1326 TGAATGTCGAGCCTCAGGATGCCGGATATTTTGTACCGCCTTCAGAGAACGGATGTAAGG 1385 || ||||||| ||| || || | | | | | |||| || |||| |||| |||| | Sbjct 984 TGGATGTCGACCCTGAGATCGCTGCAAAGYTYGAACCGTCTCCAGACAACGCATGTGCAG 1043 Query 1386 ACGGCCACTTCCATCACTTCTGCGCGCAGCATGTGAATTACTGGTTGTCAAGCGTCTTGG 1445 |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct 1044 CCGGCCACTTCCATCACTTCTGCTTCCAGCATGTGAATTACTGGTTGTCGGGCGTCTTGG 1103 Query 1446 AGTTCTCAATCAAAAATTTGG---AAGAAGGGTCATTCAATGAACAAGCCACCTCCAAAT 1502 || || ||||| ||||| ||| |||||| || || | | || ||| | | Sbjct 1104 AGCCTTCGATCAAGCTTTTGGGTAAAGGCGGGTCACACATTGGAAATCGCATCTCAAGCT 1163 Query 1503 TTGTTGGTATTTTGGCTAATACAGTTTACTTCCGACACGACGGGCAACCTCTGCTTCGGT 1562 | || |||||||| | || |||||||| || || ||| ||| || |||| Sbjct 1164 TGAATGTTATTTTGGGAGCTGCAATTTACTTCTGA---GATGGGGAACAGATGTATCGGG 1220 Query 1563 CAAGCCACTTATACAGAGTCATCTAAGAATTGTAACAGTGAT 1604 | ||| |||| || | | || |||| ||| |||||||| Sbjct 1221 CGGGCCGCTTACACCTACGCCTCCGAGAAGTGTCACAGTGAT 1262 >seq3835 Length=178785 Score = 306 bits (338), Expect = 1e-79 Identities = 287/364 (79%), Gaps = 7/364 (2%) Strand=Plus/Minus Query 262 GGAATACATATTG--TATGTATAATGATAAATGTAAAGCGCA--GTTTCCATACGTTTTC 317 |||| | |||| | ||||||||||||||| | | | | || ||| || || |||| Sbjct 19792 GGAACAGATATGGAATATGTATAATGATAAGTATTATCCTCATGGTTCTCAAACTTTTTT 19733 Query 318 GTGCGTTTTGTATTTCTTAACAAAAAGTTTAAAACATTTTTATTATTTC-AACTTGCTCA 376 |||| |||||||| ||| ||| ||||| ||| ||||| ||||||| ||| |||||| Sbjct 19732 -TGCGCATTGTATTTTCTAATAAAGAGTTTGAAATATTTTGATTATTTTGAACCTGCTCA 19674 Query 377 CCAGCGTTTACGGCACACAGCTTGCCTGCCGTTGCTTGGCGGCCGTGCTCGGGTCATGCC 436 |||| || ||||||| ||||||||||||||||||||||| || |||||||||| ||| Sbjct 19673 CCAGAATTCACGGCACCCAGCTTGCCTGCCGTTGCTTGGCAGCYGTGCTCGGGTGATGGT 19614 Query 437 AGTGTGCATTTTTGTAAAACAGCATGATGAGGTGCTCCAGTTGGCTACGACAACCAACGG 496 || ||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct 19613 AGYGTGCATTTTTGTAAAACAGCATGATGAGGTGCTCCGGTTCGCTATGACAACCAACGG 19554 Query 497 TCATAAACTTGTTGACAATGCGTCATTC-TAGTCGAGCGTCAAATACGTAGGCGCCAGTA 555 |||| | || |||||||||||| | | | | || | || || |||||| | | || || Sbjct 19553 TCATGARCTCGTTGACAATGCGCCGTCCTTGGTATCGYGTGAAGTACGTAAGGGTCATTA 19494 Query 556 ACTTTTGCATGTTTAGTAGCAATAAATTTCCTTGTTTAACGAGACAATGTAATTGTTGGG 615 | |||||| ||| ||||| ||||| | ||| ||||| || |||||||||||| || Sbjct 19493 MCGTTTGCAAKTTTGGTAGCMATAAAATGCCTCTTTTAATAGGAAAATGTAATTGTTAGG 19434 Query 616 GTCG 619 |||| Sbjct 19433 GTCG 19430 >seq3465 Length=1625 Score = 289 bits (320), Expect = 1e-74 Identities = 286/364 (79%), Gaps = 7/364 (2%) Strand=Plus/Minus Query 262 GGAATACATATTGTAT--GTATAATGATAAATGTAAAGCGCA--GTTTCCATACGTTTTC 317 |||| | |||| | || ||||||||| || | | | | || ||| || || ||||| Sbjct 907 GGAACAGATATGGAATACGTATAATGAAAAGTATTATCCTCATGGTTCTCAAACTTTTTC 848 Query 318 GTGCGTTTTGTATTTCTTAACAAAAAGTTTAAAACATTTTTATTA-TTTCAACTTGCTCA 376 ||| |||||||| ||| ||||||||| ||| ||||| |||| ||| ||| |||||| Sbjct 847 -TGCCCATTGTATTTTCTAATAAAAAGTTTGAAATATTTTGATTAGTTTAAACCTGCTCA 789 Query 377 CCAGCGTTTACGGCACACAGCTTGCCTGCCGTTGCTTGGCGGCCGTGCTCGGGTCATGCC 436 |||| || ||||||| ||||||||||||||||||||||| ||||||||||||| || Sbjct 788 CCAGAATTCACGGCACCCAGCTTGCCTGCCGTTGCTTGGCAGCCGTGCTCGGGTGATAGT 729 Query 437 AGTGTGCATTTTTGTAAAACAGCATGATGAGGTGCTCCAGTTGGCTACGACAACCAACGG 496 ||||||||||||| |||||||||||||||||||||| ||||| ||| |||||||||||| Sbjct 728 AGTGTGCATTTTTCTAAAACAGCATGATGAGGTGCTTCAGTTCGCTGTGACAACCAACGG 669 Query 497 TCATAAACTTGTTGACAATGCGTCATTC-TAGTCGAGCGTCAAATACGTAGGCGCCAGTA 555 |||| |||| |||||||||||| | | | || | || | ||||| | | || || Sbjct 668 TCATGAACTCGTTGACAATGCGCTGTCCTTGGTATCGTGTGAGGTACGTGAGGGTCATTA 609 Query 556 ACTTTTGCATGTTTAGTAGCAATAAATTTCCTTGTTTAACGAGACAATGTAATTGTTGGG 615 || |||||| |||| ||||||||||| | ||| ||||| || |||||||||||| || Sbjct 608 ACGTTTGCAAGTTTGGTAGCAATAAAATGCCTCTTTTAATAGGAAAATGTAATTGTTAGG 549 Query 616 GTCG 619 |||| Sbjct 548 GTCG 545 Score = 250 bits (276), Expect = 9e-63 Identities = 223/276 (81%), Gaps = 5/276 (2%) Strand=Plus/Minus Query 857 ACTTCTGAGACTAAAATCGCAATGCATCCAGAAGAAGACGCAGCAGAATCAGGGGGCCCA 916 ||| ||||||||||||||||| || ||||||||||| ||| | |||||| ||||||| Sbjct 274 ACTCCTGAGACTAAAATCGCAGTGAATCCAGAAGAACACGTAA---AATCAGCGGGCCCA 218 Query 917 TCGGTGCAGCCGTATTTTCTGATAAAGGAGGTGTTACCTACGGACCTAATACTCCACATC 976 || || ||| |||||| ||| |||||||||||||||| ||||||||| || || || Sbjct 217 CGGGAGCTGCCATATTTTGTGAAAAAGGAGGTGTTACCTGTCGACCTAATAATCTACCTC 158 Query 977 GGTAACTTCATGAAGTTTGTAGATTATGTGCGCTTCATACGAGTCTTGTGGCCTAACAAT 1036 |||||||||||| |||| | ||||| || ||| || ||||| |||| |||||||| || Sbjct 157 GGTAACTTCATGGAGTTCGAAGATTCTGCAAGCTCCAAACGAGGCTTGGGGCCTAACCAT 98 Query 1037 GACGAAGACGAATCGG-TGCGGATGAAATTGTGGAAGATGTCTACCCACCGTTTGCGCAG 1095 || ||||||| |||| | || || |||||| |||||| |||||||||||| ||||||| Sbjct 97 GATGAAGACGCATCGACTCCGCAT-AAATTGCGGAAGAAGTCTACCCACCGGTTGCGCAT 39 Query 1096 TGAGTTTATGAATGGCAAATATCTTGAAATAGAGTA 1131 ||| ||||| ||| |||| |||| ||| ||||||| Sbjct 38 TGAATTTATAAATAGCAAGCATCTGGAAGTAGAGTA 3 >seq2001 Length=584060 Score = 232 bits (256), Expect = 2e-57 Identities = 205/253 (81%), Gaps = 5/253 (2%) Strand=Plus/Minus Query 857 ACTTCTGAGACTAAAATCGCAATGCATCCAGAAGAAGACGCAGCAGAATCAGGGGGCCCA 916 ||| |||| |||||||||||| || ||||||||||| ||| | |||||| |||||| Sbjct 112487 ACTCCTGATACTAAAATCGCAGTGAATCCAGAAGAACACGTAA---AATCAGCGGGCCCG 112431 Query 917 TCGGTGCAGCCGTATTTTCTGATAAAGGAGGTGTTACCTACGGACCTAATACTCCACATC 976 | || || |||||| ||||||| |||||||||||||||| ||||||||| || || || Sbjct 112430 TGGGAGCTGCCGTAATTTCTGAAAAAGGAGGTGTTACCTGTCGACCTAATAATCTACCTC 112371 Query 977 GGTAACTTCATGAAGTTTGTAGATTATGTGCGCTTCATACGAGTCTTGTGGCCTAACAAT 1036 |||||||||||| ||| | ||||| || ||| |||||||| |||| |||||||| | Sbjct 112370 GGTAACTTCATGGAGTCCGAAGATTCTGCAAGCTCCATACGAGGCTTGGGGCCTAACCAC 112311 Query 1037 GACGAAGACGAATCGG-TGCGGATGAAATTGTGGAAGATGTCTACCCACCGTTTGCGCAG 1095 |||||||||| |||| | || ||||| ||||| |||| |||||||||||| ||||||| Sbjct 112310 GACGAAGACGCATCGACTCCGCATGAA-TTGTGAAAGAAGTCTACCCACCGGTTGCGCAT 112252 Query 1096 TGAGTTTATGAAT 1108 ||| ||||| ||| Sbjct 112251 TGAATTTATAAAT 112239 >seq203 Length=38526 Score = 125 bits (138), Expect = 3e-25 Identities = 135/174 (78%), Gaps = 6/174 (3%) Strand=Plus/Plus Query 262 GGAATACATATTGTAT--GTATAATGATAAATGTAAAGCGCA--GTTTCCATACGTTTTC 317 |||| | |||| | || |||| |||| || | | | | || ||| || || ||||| Sbjct 38354 GGAACATATATGGAATACGTATCATGAAAAGTATTATCCTCATGGTTCTCAAACTTTTTC 38413 Query 318 GTGCGTTTTGTATTTCTTAACAAAAAGTTTAAAACATTTTTATTATTTC-AACTTGCTCA 376 |||| |||||||| ||| ||| ||||| ||| ||||| ||||||| ||| |||||| Sbjct 38414 -TGCGCATTGTATTTTCTAATAAAGAGTTTGAAATATTTTGATTATTTTGAACCTGCTCA 38472 Query 377 CCAGCGTTTACGGCACACAGCTTGCCTGCCGTTGCTTGGCGGCCGTGCTCGGGT 430 |||| || ||||||| ||| ||||||||||||||||||| ||||||||||||| Sbjct 38473 CCAGAATTCACGGCACCCAGTTTGCCTGCCGTTGCTTGGCAGCCGTGCTCGGGT 38526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17739922357080