Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10]
4,523 sequences; 239,677,193 total letters
Query= NC_008994.1
Length=5579
Score E
Sequences producing significant alignments: (Bits) Value
seq4134 475 1e-130
seq1091 459 9e-126
seq1713 365 2e-97
seq3610 354 3e-94
seq3835 306 1e-79
seq3465 289 1e-74
seq2001 232 2e-57
seq203 125 3e-25
>seq4134
Length=103268
Score = 475 bits (526), Expect = 1e-130
Identities = 469/603 (78%), Gaps = 5/603 (1%)
Strand=Plus/Plus
Query 857 ACTTCTGAGACTAAAATCGCAATGCATCCAGAAGAAGACGCAGCAGAATCAGGGGGCCCA 916
||| ||||||||||||||||| || ||||||||||| || | |||||| |||||||
Sbjct 4376 ACTCCTGAGACTAAAATCGCAGTGAATCCAGAAGAACACATAA---AATCAGCGGGCCCA 4432
Query 917 TCGGTGCAGCCGTATTTTCTGATAAAGGAGGTGTTACCTACGGACCTAATACTCCACATC 976
| || || ||||||| |||||| |||||||||||||||| ||||||||| || || ||
Sbjct 4433 TGGGAGCTGCCGTATCTTCTGAAAAAGGAGGTGTTACCTGTCGACCTAATAATCTACCTC 4492
Query 977 GGTAACTTCATGAAGTTTGTAGATTATGTGCGCTTCATACGAGTCTTGTGGCCTAACAAT 1036
|||||||||| | ||| | ||||| || ||| |||||||| |||| |||||||| ||
Sbjct 4493 GGTAACTTCACGGAGTCCGAAGATTCTGCAAGCTCCATACGAGGCTTGGGGCCTAACCAT 4552
Query 1037 GACGAAGACGAATCG-GTGCGGATGAAATTGTGGAAGATGTCTACCCACCGTTTGCGCAG 1095
|||||||||| |||| | || ||| |||||||||||| |||||||||||| |||||||
Sbjct 4553 GACGAAGACGCATCGACTCCGCATG-AATTGTGGAAGAAGTCTACCCACCGGTTGCGCAT 4611
Query 1096 TGAGTTTATGAATGGCAAATATCTTGAAATAGAGTATAATTATGATCACACCAGGATCGA 1155
||| ||||| |||||||| |||| ||| ||||||| |||| || | |||| |||| ||
Sbjct 4612 TGAATTTATAAATGGCAAGCATCTGGAAGTAGAGTAAAATTTCGAACGCACCGGGATAGA 4671
Query 1156 AGAACAGCGGGTGCTTATCAACGTCAACACTTTGCTGCCGGTGTTAGGCAGCGTGATCCC 1215
||| ||||| | | |||||||| ||||||||| |||||||||| || | || | ||
Sbjct 4672 TGAAGAGCGGATTCGCATCAACGTAAACACTTTGTTGCCGGTGTTTGGTTGATTGTTACC 4731
Query 1216 TCCGGACATGGAAACCTTCGTGGACGTGAAGAGGCTTTTGGCTTTTGTGGAGGCGACCGT 1275
||| | || |||||||||||||||||| | | ||| | |||| |||||| || | |
Sbjct 4732 TCCAGGCACAGAAACCTTCGTGGACGTGGAAAAGCTCGTCACTTTCGTGGAGACGTACCT 4791
Query 1276 TCGTTTAAACGGGTGTTGCGGCCATAATAACGCGTCCTGTCCGTGCCATTTGAATGTCGA 1335
|| ||| ||| |||| || ||| || | |||||||| ||||||||| |||||||
Sbjct 4792 TCATTTGAACAAGTGTAACGACCAACGATACACCTCCTGTCCCTGCCATTTGGATGTCGA 4851
Query 1336 GCCTCAGGATGCCGGATATTTTGTACCGCCTTCAGAGAACGGATGTAAGGACGGCCACTT 1395
||| || || | | | ||| |||| || |||| |||| |||| | ||||||| |
Sbjct 4852 CCCTGAGACCGCTGCAAAGCTTGAACCGTCTCCAGACAACGCATGTGCAGCCGGCCACGT 4911
Query 1396 CCATCACTTCTGCGCGCAGCATGTGAATTACTGGTTGTCAAGCGTCTTGGAGTTCTCAAT 1455
||||||||||||| ||||||||||||||||||||||| |||||||||| || ||
Sbjct 4912 CCATCACTTCTGCTTTCAGCATGTGAATTACTGGTTGTCGGACGTCTTGGAGCCTTCGAT 4971
Query 1456 CAA 1458
|||
Sbjct 4972 CAA 4974
Score = 298 bits (330), Expect = 2e-77
Identities = 288/364 (79%), Gaps = 7/364 (2%)
Strand=Plus/Plus
Query 262 GGAATACATATTG--TATGTATAATGATAAATGTAAAGCGCA--GTTTCCATACGTTTTC 317
|||| | |||| | |||||||||||| || | | | | || ||| || || |||||
Sbjct 3739 GGAAAAGATATGGAATATGTATAATGACAAGTATTATCCTCATGGTTCTCAGACTTTTTC 3798
Query 318 GTGCGTTTTGTATTTCTTAACAAAAAGTTTAAAACATTTTTATTATTTC-AACTTGCTCA 376
|||| |||||||| ||| ||| ||||| ||| ||||| ||||||| ||| ||||||
Sbjct 3799 -TGCGCATTGTATTTTCTAATAAAGAGTTTGAAATATTTTGATTATTTTGAACCTGCTCA 3857
Query 377 CCAGCGTTTACGGCACACAGCTTGCCTGCCGTTGCTTGGCGGCCGTGCTCGGGTCATGCC 436
|||| || ||||||| |||||||||||||||||||| || ||||||||||||| | |
Sbjct 3858 CCAGAATTCACGGCACCCAGCTTGCCTGCCGTTGCTTCGCAGCCGTGCTCGGGTGACGGT 3917
Query 437 AGTGTGCATTTTTGTAAAACAGCATGATGAGGTGCTCCAGTTGGCTACGACAACCAACGG 496
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct 3918 AGTGTGCATTTTTGTAAAACAGCATGATGAGGTGCTCCAGTTCGCTATGACAACCAACGG 3977
Query 497 TCATAAACTTGTTGACAATGCGTCATTC-TAGTCGAGCGTCAAATACGTAGGCGCCAGTA 555
|||| |||| ||||||||||| | | | | || | || || |||||| | | || ||
Sbjct 3978 TCATGAACTCGTTGACAATGCACCGTCCTTGGTATCGTGTGAAGTACGTAAGGGTCATTA 4037
Query 556 ACTTTTGCATGTTTAGTAGCAATAAATTTCCTTGTTTAACGAGACAATGTAATTGTTGGG 615
|| |||||| || ||||||||| | | ||| ||||| || |||||||||||| ||
Sbjct 4038 ACGTTTGCAATTTCGGTAGCAATAGAATGCCTCTTTTAATAGGAAAATGTAATTGTTAGG 4097
Query 616 GTCG 619
||||
Sbjct 4098 GTCG 4101
Score = 93.3 bits (102), Expect = 1e-15
Identities = 97/128 (76%), Gaps = 11/128 (9%)
Strand=Plus/Plus
Query 5185 AGCCGCATTCCATATTTTCAAAGTGGTAGCCGCGCCACTTCGCCATATTTGCTCGAGAGT 5244
||||| ||||| ||||||||||||||||||| ||||||| | ||| ||||||
Sbjct 3351 AGCCGTATTCCGTATTTTCAAAGTGGTAGCCACGCCACTCC---------GCTGGAGAGT 3401
Query 5245 GCTCTGAATATCGACACAGTGTGGGGTGGA--ATGGCTTATTATGATGAAGATGGAAGAC 5302
|||||| || |||||||| || ||||| || |||||| ||||||| | | | |||
Sbjct 3402 GCTCTGGATTTCGACACATCGTTCTGTGGAATATAGCTTATGATGATGACGCTTGTTGAC 3461
Query 5303 TGATTGAT 5310
||||| ||
Sbjct 3462 TGATTAAT 3469
>seq1091
Length=38165
Score = 459 bits (508), Expect = 9e-126
Identities = 449/579 (78%), Gaps = 5/579 (1%)
Strand=Plus/Plus
Query 857 ACTTCTGAGACTAAAATCGCAATGCATCCAGAAGAAGACGCAGCAGAATCAGGGGGCCCA 916
||| ||||||||||||||||| || ||||||||||| ||| | |||||| |||||||
Sbjct 2417 ACTCCTGAGACTAAAATCGCAGTGAATCCAGAAGAACACGTAA---AATCAGCGGGCCCA 2473
Query 917 TCGGTGCAGCCGTATTTTCTGATAAAGGAGGTGTTACCTACGGACCTAATACTCCACATC 976
|| || |||||||||| ||| |||||||||||||||| ||||||||| || || ||
Sbjct 2474 CGGGAGCTGCCGTATTTTGTGAAAAAGGAGGTGTTACCTGTCGACCTAATAATCTACCTC 2533
Query 977 GGTAACTTCATGAAGTTTGTAGATTATGTGCGCTTCATACGAGTCTTGTGGCCTAACAAT 1036
| |||||||||| ||| | ||||| | ||| || ||||| |||| |||||||| ||
Sbjct 2534 GTTAACTTCATGGAGTCCGAAGATTCYGCAAGCTCCAAACGAGGCTTGGGGCCTAACCAT 2593
Query 1037 GACGAAGACGAATCG-GTGCGGATGAAATTGTGGAAGATGTCTACCCACCGTTTGCGCAG 1095
|| ||||||| |||| | || || |||||| |||||| |||||||||||| |||||||
Sbjct 2594 GAYGAAGACGCATCGACTCCGCAT-AAATTGCGGAAGAAGTCTACCCACCGGTTGCGCAT 2652
Query 1096 TGAGTTTATGAATGGCAAATATCTTGAAATAGAGTATAATTATGATCACACCAGGATCGA 1155
||| ||||| ||| |||| |||| ||| ||||||| | || || |||| |||| ||
Sbjct 2653 TGAATTTATAAATAGCAAGCATCTGGAAGTAGAGTACATTTTCGAATGCACCGGGATAGA 2712
Query 1156 AGAACAGCGGGTGCTTATCAACGTCAACACTTTGCTGCCGGTGTTAGGCAGCGTGATCCC 1215
||| | ||| | | |||||||| ||||||||| |||||||||| || | || | ||
Sbjct 2713 TGAAGAACGGATTCGCATCAACGTAAACACTTTGTTGCCGGTGTTTGGTGGATTGTTACC 2772
Query 1216 TCCGGACATGGAAACCTTCGTGGACGTGAAGAGGCTTTTGGCTTTTGTGGAGGCGACCGT 1275
||| | || ||||||||||||||||||| ||| ||| | |||| |||||| || |||
Sbjct 2773 TCCAGGCACGGAAACCTTCGTGGACGTGGAGAAGCTYGTCACTTTCGTGGAGACGYACGT 2832
Query 1276 TCGTTTAAACGGGTGTTGCGGCCATAATAACGCGTCCTGTCCGTGCCATTTGAATGTCGA 1335
|| ||| ||| |||| || ||| |||| |||||||| ||||||||| |||||||
Sbjct 2833 TCATTTGAACAAGTGTAACGACCAACGATACGCCTCCTGTCCCTGCCATTTGRATGTCGA 2892
Query 1336 GCCTCAGGATGCCGGATATTTTGTACCGCCTTCAGAGAACGGATGTAAGGACGGCCACTT 1395
||| || || | | | ||| |||| || |||| |||| |||| | |||||||||
Sbjct 2893 CCCTGAGAYCGCTGCAAAGYTTGAACCGTCTCCAGACAACGCATGTGCAGCCGGCCACTT 2952
Query 1396 CCATCACTTCTGCGCGCAGCATGTGAATTACTGGTTGTC 1434
||||||||||||| |||||||||||||||||||||||
Sbjct 2953 CCATCACTTCTGCTTCCAGCATGTGAATTACTGGTTGTC 2991
Score = 304 bits (336), Expect = 5e-79
Identities = 289/364 (79%), Gaps = 7/364 (2%)
Strand=Plus/Plus
Query 262 GGAATACATATTGTAT--GTATAATGATAAATGTAAAGCGCA--GTTTCCATACGTTTTC 317
|||| | |||| | || |||| |||| || | | | | || ||| || || |||||
Sbjct 1784 GGAACATATATGGAATACGTATCATGAAAAGTATTATCCTCATGGTTCTCAAACTTTTTC 1843
Query 318 GTGCGTTTTGTATTTCTTAACAAAAAGTTTAAAACATTTTTATTATTTC-AACTTGCTCA 376
|||| |||||||| ||| ||| ||||| ||| ||||| ||||||| ||| ||||||
Sbjct 1844 -TGCGCATTGTATTTTCTAATAAAGAGTTTGAAATATTTTGATTATTTTGAACCTGCTCA 1902
Query 377 CCAGCGTTTACGGCACACAGCTTGCCTGCCGTTGCTTGGCGGCCGTGCTCGGGTCATGCC 436
|||| || ||||||| ||| ||||||||||||||||||| ||||||||||||| |||
Sbjct 1903 CCAGAATTCACGGCACCCAGYTTGCCTGCCGTTGCTTGGCAGCCGTGCTCGGGTRATGGT 1962
Query 437 AGTGTGCATTTTTGTAAAACAGCATGATGAGGTGCTCCAGTTGGCTACGACAACCAACGG 496
|| |||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||
Sbjct 1963 AGCGTGCATTTTTGTAAAACAGCATGATGAGATGCTCCAGTTCGCTATGACAACCAACGG 2022
Query 497 TCATAAACTTGTTGACAATGCGTCATTC-TAGTCGAGCGTCAAATACGTAGGCGCCAGTA 555
|||| |||| |||||||||||| | | | | || | || || |||||| | | || ||
Sbjct 2023 TCATGAACTCGTTGACAATGCGCCGTCCTTGGTATCGTGTGAAGTACGTAAGGGTCATTA 2082
Query 556 ACTTTTGCATGTTTAGTAGCAATAAATTTCCTTGTTTAACGAGACAATGTAATTGTTGGG 615
|| |||||| |||| ||||||||||| | ||| ||||| || |||||||||||| ||
Sbjct 2083 ACGTTTGCAAGTTTGGTAGCAATAAAATGCCTCTTTTAATAGGAAAATGTAATTGTTAGG 2142
Query 616 GTCG 619
||||
Sbjct 2143 GTCG 2146
Score = 201 bits (222), Expect = 4e-48
Identities = 220/293 (75%), Gaps = 20/293 (7%)
Strand=Plus/Plus
Query 1894 AGATTACAGTGAGGCCCCTAAGAATTG-ACTAAGTCTGCGAACTTGTAAGAACACCAGCA 1952
||||||||||||| | |||||| || |||||||| || || || ||||| | ||||
Sbjct 7987 AGATTACAGTGAGATCTCTAAGAGTTTTACTAAGTCCGCAAAGTTATAAGAGCGAGAGCA 8046
Query 1953 AGACGAACGAAGCACTTTGGTGCCTTCACATCTGGAGCCACATCTAATCATAGGTAAATC 2012
||| |||||| || ||||| || ||||| |||| |||||||| ||| |||| ||||||||
Sbjct 8047 AGAAGAACGAGGCGCTTTGCTGTCTTCAGATCTTGAGCCACAACTAGTCATTGGTAAATC 8106
Query 2013 ATACGCAGCCGCTGTAGTTCTTAGAGCCC---CCT------TACCCCTGTACC------- 2056
|||| |||||||| ||||| || || | ||| | |||||| |||
Sbjct 8107 ATACACAGCCGCTACAGTTCCTATAGTTCTTACCTGATTCCTCCCCCTGCACCTCCCCCT 8166
Query 2057 ---CCCTTCATGCCCGTGTCCTGTCGTTTCGCTGTTACGAGGTCCCAGGAATAAATGAAA 2113
| ||| ||| || ||| |||||| | || | ||||||||||| ||||| ||||
Sbjct 8167 GCACTCTTTATGAYCGCTTCCCATCGTTTTGAMGTCATGAGGTCCCAGGTATAAACGAAA 8226
Query 2114 AAGCACATAGTTTATAGATCAATTTATTTTAAAATACGAGTAGATGGGAGGTA 2166
||||||| || ||||||||||||||||| ||||||||||||||||| ||||
Sbjct 8227 GAGCACATGTTTGATAGATCAATTTATTTTTAAATACGAGTAGATGGGCGGTA 8279
>seq1713
Length=277947
Score = 365 bits (404), Expect = 2e-97
Identities = 448/610 (73%), Gaps = 12/610 (2%)
Strand=Plus/Plus
Query 1027 GCCTAACAATGACGAAGACGAATCG-GTGCGGATGAAATTGTGGAAGATGTCTACCCACC 1085
||||||| |||||||||||| |||| | || || |||||| |||||| |||||||||||
Sbjct 16099 GCCTAACTATGACGAAGACGCATCGACTCCGCAT-AAATTGCGGAAGAAGTCTACCCACC 16157
Query 1086 GTTTGCGCAGTGAGTTTATGAATGGCAAATATCTTGAAATAGAGTATAATTATGATCACA 1145
| ||||||| ||| ||||| |||||||| || | ||| || |||| |||| || | ||
Sbjct 16158 GGTTGCGCATTGAATTTATAAATGGCAAGCATSTGGAAGTARAGTAMAATTKCGAACGCA 16217
Query 1146 CCAGGATCGAAGAACAGCGGGTGCTTATCAACGTCAACACTTTGCTGCCGGTGTTAGGCA 1205
|| |||| || ||| ||||| | | |||||||| ||||||||| |||||||||| || |
Sbjct 16218 CCGGGATAGATGAAGAGCGGATTCGCATCAACGTAAACACTTTGTTGCCGGTGTTTGGTA 16277
Query 1206 GCGTGATCCCTCCGGACATGGAAACCTTCGTGGACGTGAAGAGGCTTTTGGCTTTTGTGG 1265
| || | ||||| | || ||||||||||||| ||||| ||| ||| | |||| ||||
Sbjct 16278 GATTGTTACCTCCAGGCACGGAAACCTTCGTGAACGTGGAGAAGCTCGTCACTTTCGTGG 16337
Query 1266 AGGCGACCGTTCGTTTAAACGGGTGTTGCGGCCATAATAACGCGTCCTGTCCGTGCCATT 1325
|| || ||||| ||| ||| |||| || ||| |||| |||||||| |||||||
Sbjct 16338 AGACGTACGTTCATTTGAACAAGTGTAACGACCAACGATACGCCTCCTGTCCCTGCCATT 16397
Query 1326 TGAATGTCGAGCCTCAGGATGCCGGATATTTTGTACCGCCTTCAGAGAACGGATGTAAGG 1385
|| ||||||| ||| || || | | | | | |||| || |||| |||| |||| |
Sbjct 16398 TGGATGTCGACCCTGAGAYCGCTGCAAAGYTYGAACCGTCTCCAGACAACGCATGTGCAG 16457
Query 1386 ACGGCCACTTCCATCACTTCTGCGCGCAGCATGTGAATTACTGGTTGTCAAGCGTCTTGG 1445
|||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 16458 SCGGCCACTTCCATCACTTCTGCTTCCAGCATGTGAATTACTGGTTGTCGGACGTCTTGG 16517
Query 1446 AGTTCTCAATCAAAAATTTGG---AAGAAGGGTCATTCAATGAACAAGCCACCTCCAAAT 1502
|| || ||||| ||||| ||| |||||| || |||| | || ||| | |
Sbjct 16518 AGCCTTCGATCAAGCTTTTGGGTAAAGGCGGGTCACACATTGAAAATCGCATCTCGAGCT 16577
Query 1503 TTGTTGGTATTTTGGCTAATACAGTTTACTTCCGACACGACGGGCAACCTCTGCTTCGGT 1562
| | |||||||| | || ||||||||||| || ||| ||| || | |||
Sbjct 16578 TGAATTTTATTTTGGGAGTTGCAATTTACTTCCGA---GATGGGGAACAGATGTTCCGGG 16634
Query 1563 CAAGCCACTTATACAGAGTCATCTAAGAATTGTAACAGTGATACACGGTATATAGTGATG 1622
| |||| || | || | | || |||| ||| |||||||| || | | |||||
Sbjct 16635 CGAGCCGCTCACACCCACGCCTCCGAGAAATGTCACAGTGATTTACAG----CACTGATG 16690
Query 1623 GTGAATATGT 1632
||||||||||
Sbjct 16691 GTGAATATGT 16700
>seq3610
Length=1450
Score = 354 bits (392), Expect = 3e-94
Identities = 428/582 (74%), Gaps = 8/582 (1%)
Strand=Plus/Plus
Query 1027 GCCTAACAATGACGAAGACGAATCG-GTGCGGATGAAATTGTGGAAGATGTCTACCCACC 1085
||||||| |||||||||||| |||| | || || |||||| |||||| |||||||||||
Sbjct 685 GCCTAACTATGACGAAGACGCATCGACTCCGCAT-AAATTGCGGAAGAAGTCTACCCACC 743
Query 1086 GTTTGCGCAGTGAGTTTATGAATGGCAAATATCTTGAAATAGAGTATAATTATGATCACA 1145
||||||| ||| ||||| |||||||| || | ||| || |||| |||| || | ||
Sbjct 744 RGTTGCGCATTGAATTTATAAATGGCAAGCATSTGGAAGTARAGTAMAATTKCGAACGCA 803
Query 1146 CCAGGATCGAAGAACAGCGGGTGCTTATCAACGTCAACACTTTGCTGCCGGTGTTAGGCA 1205
|| |||| || ||| ||||| | | |||||||| ||||||||| |||||||||| || |
Sbjct 804 CCGGGATAGATGAAGAGCGGATTCGCATCAACGTAAACACTTTGTTGCCGGTGTTTGGTA 863
Query 1206 GCGTGATCCCTCCGGACATGGAAACCTTCGTGGACGTGAAGAGGCTTTTGGCTTTTGTGG 1265
| || | ||||| | || ||||||||||||| ||||| ||| ||| | |||| ||||
Sbjct 864 GATTGTTACCTCCAGGCACGGAAACCTTCGTGAACGTGGAGAAGCTCGTCACTTTCGTGG 923
Query 1266 AGGCGACCGTTCGTTTAAACGGGTGTTGCGGCCATAATAACGCGTCCTGTCCGTGCCATT 1325
|| || ||||| ||| ||| |||| || ||| |||| |||||||| |||||||
Sbjct 924 AGACGTACGTTCATTTGAACAAGTGTAACGACCAACGATACGCCTCCTGTCCCTGCCATT 983
Query 1326 TGAATGTCGAGCCTCAGGATGCCGGATATTTTGTACCGCCTTCAGAGAACGGATGTAAGG 1385
|| ||||||| ||| || || | | | | | |||| || |||| |||| |||| |
Sbjct 984 TGGATGTCGACCCTGAGATCGCTGCAAAGYTYGAACCGTCTCCAGACAACGCATGTGCAG 1043
Query 1386 ACGGCCACTTCCATCACTTCTGCGCGCAGCATGTGAATTACTGGTTGTCAAGCGTCTTGG 1445
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 1044 CCGGCCACTTCCATCACTTCTGCTTCCAGCATGTGAATTACTGGTTGTCGGGCGTCTTGG 1103
Query 1446 AGTTCTCAATCAAAAATTTGG---AAGAAGGGTCATTCAATGAACAAGCCACCTCCAAAT 1502
|| || ||||| ||||| ||| |||||| || || | | || ||| | |
Sbjct 1104 AGCCTTCGATCAAGCTTTTGGGTAAAGGCGGGTCACACATTGGAAATCGCATCTCAAGCT 1163
Query 1503 TTGTTGGTATTTTGGCTAATACAGTTTACTTCCGACACGACGGGCAACCTCTGCTTCGGT 1562
| || |||||||| | || |||||||| || || ||| ||| || ||||
Sbjct 1164 TGAATGTTATTTTGGGAGCTGCAATTTACTTCTGA---GATGGGGAACAGATGTATCGGG 1220
Query 1563 CAAGCCACTTATACAGAGTCATCTAAGAATTGTAACAGTGAT 1604
| ||| |||| || | | || |||| ||| ||||||||
Sbjct 1221 CGGGCCGCTTACACCTACGCCTCCGAGAAGTGTCACAGTGAT 1262
>seq3835
Length=178785
Score = 306 bits (338), Expect = 1e-79
Identities = 287/364 (79%), Gaps = 7/364 (2%)
Strand=Plus/Minus
Query 262 GGAATACATATTG--TATGTATAATGATAAATGTAAAGCGCA--GTTTCCATACGTTTTC 317
|||| | |||| | ||||||||||||||| | | | | || ||| || || ||||
Sbjct 19792 GGAACAGATATGGAATATGTATAATGATAAGTATTATCCTCATGGTTCTCAAACTTTTTT 19733
Query 318 GTGCGTTTTGTATTTCTTAACAAAAAGTTTAAAACATTTTTATTATTTC-AACTTGCTCA 376
|||| |||||||| ||| ||| ||||| ||| ||||| ||||||| ||| ||||||
Sbjct 19732 -TGCGCATTGTATTTTCTAATAAAGAGTTTGAAATATTTTGATTATTTTGAACCTGCTCA 19674
Query 377 CCAGCGTTTACGGCACACAGCTTGCCTGCCGTTGCTTGGCGGCCGTGCTCGGGTCATGCC 436
|||| || ||||||| ||||||||||||||||||||||| || |||||||||| |||
Sbjct 19673 CCAGAATTCACGGCACCCAGCTTGCCTGCCGTTGCTTGGCAGCYGTGCTCGGGTGATGGT 19614
Query 437 AGTGTGCATTTTTGTAAAACAGCATGATGAGGTGCTCCAGTTGGCTACGACAACCAACGG 496
|| ||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||
Sbjct 19613 AGYGTGCATTTTTGTAAAACAGCATGATGAGGTGCTCCGGTTCGCTATGACAACCAACGG 19554
Query 497 TCATAAACTTGTTGACAATGCGTCATTC-TAGTCGAGCGTCAAATACGTAGGCGCCAGTA 555
|||| | || |||||||||||| | | | | || | || || |||||| | | || ||
Sbjct 19553 TCATGARCTCGTTGACAATGCGCCGTCCTTGGTATCGYGTGAAGTACGTAAGGGTCATTA 19494
Query 556 ACTTTTGCATGTTTAGTAGCAATAAATTTCCTTGTTTAACGAGACAATGTAATTGTTGGG 615
| |||||| ||| ||||| ||||| | ||| ||||| || |||||||||||| ||
Sbjct 19493 MCGTTTGCAAKTTTGGTAGCMATAAAATGCCTCTTTTAATAGGAAAATGTAATTGTTAGG 19434
Query 616 GTCG 619
||||
Sbjct 19433 GTCG 19430
>seq3465
Length=1625
Score = 289 bits (320), Expect = 1e-74
Identities = 286/364 (79%), Gaps = 7/364 (2%)
Strand=Plus/Minus
Query 262 GGAATACATATTGTAT--GTATAATGATAAATGTAAAGCGCA--GTTTCCATACGTTTTC 317
|||| | |||| | || ||||||||| || | | | | || ||| || || |||||
Sbjct 907 GGAACAGATATGGAATACGTATAATGAAAAGTATTATCCTCATGGTTCTCAAACTTTTTC 848
Query 318 GTGCGTTTTGTATTTCTTAACAAAAAGTTTAAAACATTTTTATTA-TTTCAACTTGCTCA 376
||| |||||||| ||| ||||||||| ||| ||||| |||| ||| ||| ||||||
Sbjct 847 -TGCCCATTGTATTTTCTAATAAAAAGTTTGAAATATTTTGATTAGTTTAAACCTGCTCA 789
Query 377 CCAGCGTTTACGGCACACAGCTTGCCTGCCGTTGCTTGGCGGCCGTGCTCGGGTCATGCC 436
|||| || ||||||| ||||||||||||||||||||||| ||||||||||||| ||
Sbjct 788 CCAGAATTCACGGCACCCAGCTTGCCTGCCGTTGCTTGGCAGCCGTGCTCGGGTGATAGT 729
Query 437 AGTGTGCATTTTTGTAAAACAGCATGATGAGGTGCTCCAGTTGGCTACGACAACCAACGG 496
||||||||||||| |||||||||||||||||||||| ||||| ||| ||||||||||||
Sbjct 728 AGTGTGCATTTTTCTAAAACAGCATGATGAGGTGCTTCAGTTCGCTGTGACAACCAACGG 669
Query 497 TCATAAACTTGTTGACAATGCGTCATTC-TAGTCGAGCGTCAAATACGTAGGCGCCAGTA 555
|||| |||| |||||||||||| | | | || | || | ||||| | | || ||
Sbjct 668 TCATGAACTCGTTGACAATGCGCTGTCCTTGGTATCGTGTGAGGTACGTGAGGGTCATTA 609
Query 556 ACTTTTGCATGTTTAGTAGCAATAAATTTCCTTGTTTAACGAGACAATGTAATTGTTGGG 615
|| |||||| |||| ||||||||||| | ||| ||||| || |||||||||||| ||
Sbjct 608 ACGTTTGCAAGTTTGGTAGCAATAAAATGCCTCTTTTAATAGGAAAATGTAATTGTTAGG 549
Query 616 GTCG 619
||||
Sbjct 548 GTCG 545
Score = 250 bits (276), Expect = 9e-63
Identities = 223/276 (81%), Gaps = 5/276 (2%)
Strand=Plus/Minus
Query 857 ACTTCTGAGACTAAAATCGCAATGCATCCAGAAGAAGACGCAGCAGAATCAGGGGGCCCA 916
||| ||||||||||||||||| || ||||||||||| ||| | |||||| |||||||
Sbjct 274 ACTCCTGAGACTAAAATCGCAGTGAATCCAGAAGAACACGTAA---AATCAGCGGGCCCA 218
Query 917 TCGGTGCAGCCGTATTTTCTGATAAAGGAGGTGTTACCTACGGACCTAATACTCCACATC 976
|| || ||| |||||| ||| |||||||||||||||| ||||||||| || || ||
Sbjct 217 CGGGAGCTGCCATATTTTGTGAAAAAGGAGGTGTTACCTGTCGACCTAATAATCTACCTC 158
Query 977 GGTAACTTCATGAAGTTTGTAGATTATGTGCGCTTCATACGAGTCTTGTGGCCTAACAAT 1036
|||||||||||| |||| | ||||| || ||| || ||||| |||| |||||||| ||
Sbjct 157 GGTAACTTCATGGAGTTCGAAGATTCTGCAAGCTCCAAACGAGGCTTGGGGCCTAACCAT 98
Query 1037 GACGAAGACGAATCGG-TGCGGATGAAATTGTGGAAGATGTCTACCCACCGTTTGCGCAG 1095
|| ||||||| |||| | || || |||||| |||||| |||||||||||| |||||||
Sbjct 97 GATGAAGACGCATCGACTCCGCAT-AAATTGCGGAAGAAGTCTACCCACCGGTTGCGCAT 39
Query 1096 TGAGTTTATGAATGGCAAATATCTTGAAATAGAGTA 1131
||| ||||| ||| |||| |||| ||| |||||||
Sbjct 38 TGAATTTATAAATAGCAAGCATCTGGAAGTAGAGTA 3
>seq2001
Length=584060
Score = 232 bits (256), Expect = 2e-57
Identities = 205/253 (81%), Gaps = 5/253 (2%)
Strand=Plus/Minus
Query 857 ACTTCTGAGACTAAAATCGCAATGCATCCAGAAGAAGACGCAGCAGAATCAGGGGGCCCA 916
||| |||| |||||||||||| || ||||||||||| ||| | |||||| ||||||
Sbjct 112487 ACTCCTGATACTAAAATCGCAGTGAATCCAGAAGAACACGTAA---AATCAGCGGGCCCG 112431
Query 917 TCGGTGCAGCCGTATTTTCTGATAAAGGAGGTGTTACCTACGGACCTAATACTCCACATC 976
| || || |||||| ||||||| |||||||||||||||| ||||||||| || || ||
Sbjct 112430 TGGGAGCTGCCGTAATTTCTGAAAAAGGAGGTGTTACCTGTCGACCTAATAATCTACCTC 112371
Query 977 GGTAACTTCATGAAGTTTGTAGATTATGTGCGCTTCATACGAGTCTTGTGGCCTAACAAT 1036
|||||||||||| ||| | ||||| || ||| |||||||| |||| |||||||| |
Sbjct 112370 GGTAACTTCATGGAGTCCGAAGATTCTGCAAGCTCCATACGAGGCTTGGGGCCTAACCAC 112311
Query 1037 GACGAAGACGAATCGG-TGCGGATGAAATTGTGGAAGATGTCTACCCACCGTTTGCGCAG 1095
|||||||||| |||| | || ||||| ||||| |||| |||||||||||| |||||||
Sbjct 112310 GACGAAGACGCATCGACTCCGCATGAA-TTGTGAAAGAAGTCTACCCACCGGTTGCGCAT 112252
Query 1096 TGAGTTTATGAAT 1108
||| ||||| |||
Sbjct 112251 TGAATTTATAAAT 112239
>seq203
Length=38526
Score = 125 bits (138), Expect = 3e-25
Identities = 135/174 (78%), Gaps = 6/174 (3%)
Strand=Plus/Plus
Query 262 GGAATACATATTGTAT--GTATAATGATAAATGTAAAGCGCA--GTTTCCATACGTTTTC 317
|||| | |||| | || |||| |||| || | | | | || ||| || || |||||
Sbjct 38354 GGAACATATATGGAATACGTATCATGAAAAGTATTATCCTCATGGTTCTCAAACTTTTTC 38413
Query 318 GTGCGTTTTGTATTTCTTAACAAAAAGTTTAAAACATTTTTATTATTTC-AACTTGCTCA 376
|||| |||||||| ||| ||| ||||| ||| ||||| ||||||| ||| ||||||
Sbjct 38414 -TGCGCATTGTATTTTCTAATAAAGAGTTTGAAATATTTTGATTATTTTGAACCTGCTCA 38472
Query 377 CCAGCGTTTACGGCACACAGCTTGCCTGCCGTTGCTTGGCGGCCGTGCTCGGGT 430
|||| || ||||||| ||| ||||||||||||||||||| |||||||||||||
Sbjct 38473 CCAGAATTCACGGCACCCAGTTTGCCTGCCGTTGCTTGGCAGCCGTGCTCGGGT 38526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 17739922357080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |