Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10] 4,523 sequences; 239,677,193 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3919 116 7e-21 >seq3919 Length=163912 Score = 116 bits (128), Expect = 7e-21 Identities = 162/226 (72%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 |||||||| ||||| || | | ||||| || |||||||| |||||||||| ||| Sbjct 142435 CTGTTCAATGCCATTGAAAACCTTCCCTGTGTCGCTAAGAAGGCAAACTGGGCGCTGAAC 142376 Query 42669 TGGATCGAGAGTCCCGAC---GCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTC 42725 ||||| | | |||| |||| ||||| ||| | | || |||||| | || ||| Sbjct 142375 TGGATAAACAA---CGACAGTGCAAACTTCGGTGAGCGAGTCGTTGCCTTTGCAGCAGTC 142319 Query 42726 GAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCG 42785 || || ||||||||| || ||||||||||| ||||||||||| || | | | Sbjct 142318 GAAGGGATCTTCTTCAGTGGAAGTTTCGCCTCCATATTCTGGCTCAAAAAGCGTGGATTG 142259 Query 42786 ATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 ||||| || || |||||| ||||| ||||| ||||||||||| Sbjct 142258 ATGCCAGGTCTGACCTTCAGCAACGAGCTCATTTCCAGGGACGAGG 142213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944285809422480