Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10]
4,523 sequences; 239,677,193 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq3112 84.2 2e-11
>seq3112
Length=543522
Score = 84.2 bits (92), Expect = 2e-11
Identities = 140/200 (70%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 20240 CCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACT 20299
|| || ||||| || | ||||||||| | || ||||| |||||||||||||| ||||
Sbjct 484203 CCTGTGACATGGGCCAACATATAAGTGAGTAGAGAATAACTGGCAATGTTAAAGGGAATA 484262
Query 20300 CCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACA 20359
|||| |||||| || || || ||| |||| ||| || | || || | || ||
Sbjct 484263 CCCAGACCCATATCCCCGCTCCGCTGGTACAATAAACACGATAATTCGCCATTAGACACG 484322
Query 20360 TAAAATTG-ACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTT 20418
|| || || || |||| || || || || | ||||| | | | ||| | || ||
Sbjct 484323 TACAACTGAACCAGACAA-TGGCAAGGTGGTAAAGCCATTATTGGGATATCCACTGGATT 484381
Query 20419 CCACGCACACATAATGATTC 20438
||| |||||||| |||||||
Sbjct 484382 CCAGGCACACATTATGATTC 484401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441347845885320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |