Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10]
4,523 sequences; 239,677,193 total letters
Query= NC_011335.1
Length=119343
Score E
Sequences producing significant alignments: (Bits) Value
seq3001 84.2 2e-11
seq4087 82.4 6e-11
>seq3001
Length=543636
Score = 84.2 bits (92), Expect = 2e-11
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAAC 108525
||||| | |||||||||||| ||||| || | | |||||| ||||| || |||||
Sbjct 353112 TGGGTTCGCGATCACAGGGTCCACCATAAATTTACGGACACGGATGCCGATCCGCACAAT 353053
Query 108526 GCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGAC 108585
|| || ||||| |||| ||||||||| |||||||||| || | ||| | | |||
Sbjct 353052 GCTAAAAGGGGTTTCTTCTTCTCGCACATGGGATGGCTGCTGGTCCGTAAGCATCGGGAC 352993
Query 108586 GTGATC 108591
||||||
Sbjct 352992 GTGATC 352987
>seq4087
Length=110752
Score = 82.4 bits (90), Expect = 6e-11
Identities = 72/90 (80%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 108475 GATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAACGCCAACAGG 108534
|| |||||||| |||||||||||| ||| ||| || || || |||||||| || ||
Sbjct 32049 GACCACAGGGTCCACCACAAGTACGTTGAGACGGACGCAGATCCCCACAACGCTAAGCGG 32108
Query 108535 GGGTTCTGGTTCTCGCACGTGGGATGGCTC 108564
|| ||||||||||| ||| |||| ||||||
Sbjct 32109 GGCTTCTGGTTCTCCCACATGGGCTGGCTC 32138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381751755132312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |