Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10]
4,523 sequences; 239,677,193 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq47 383 1e-100
seq1768 275 5e-68
seq1846 123 2e-22
seq2824 100 2e-15
>seq47
Length=398807
Score = 383 bits (424), Expect = 1e-100
Identities = 887/1319 (67%), Gaps = 16/1319 (1%)
Strand=Plus/Plus
Query 517213 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 517272
|||||||||||| || || || ||| || ||||| ||| | |||| ||||| ||
Sbjct 138340 ATTAGTAATAGTGATCTTATTTTCTTTACCAGTCGATTTGTCAACAGCAGATACATTCAG 138399
Query 517273 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 517332
|||||||| || || | ||||| || |||||||||||||| || |||| | || ||
Sbjct 138400 GATACCATTAGCGTCGATGTCAAAAGTTACTTCAATTTGAGGAACGCCTCGGGGTGCCGG 138459
Query 517333 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 517392
||| ||||| | | ||| |||| || |||||| || ||||| | | ||| ||
Sbjct 138460 TGGAATCCCGCTGAGCTCAAACTTTCCAAGTAGATTATTGTCCTTAGTCATTGCTCGCTC 138519
Query 517393 ACCCTCGAAAATTTGGAT-AGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC 517451
||| ||| | | |||||| ||| || ||| |||||||| | ||| || || || |
Sbjct 138520 ACCTTCGTAGACTTGGATGAGT-ACACCAGGCTGATTATCGGCATAGGTAGTGAACGTTT 138578
Query 517452 TGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTG 517511
| | ||| ||||| |||||||| | | |||| ||||| | ||| || |
Sbjct 138579 GTGTCTGCTTAGTTGGAATGGTTGTGTTACGCTTGATAAGTGCAGTCATGACACCGCCAG 138638
Query 517512 CTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTT 517571
| ||||| | |||||||||||| ||||| ||||| | || | || | || | || |
Sbjct 138639 CAGTTTCGATACCAAGAGAAAGGGGAGTAACATCTAAGAGAAGAAGGTCCTGCACTTCCT 138698
Query 517572 CATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 517630
| | | || | ||| ||||| || ||||| | ||| || || || || |||||||||
Sbjct 138699 C-TGACTTATCTCCATGGAGAATGGCAGCTTGGACAGCCGCTCCGTAAGCTACAGCTTCA 138757
Query 517631 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCT 517689
||||| || | || || ||| |||| || |||||||| || | || |||| || |
Sbjct 138758 TCAGGGTTGATAGATTTATTCAGTTCCTTGCCATTGAAGAAGTCCTGCAAGAGCTTCT-G 138816
Query 517690 TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATC 517749
| |||||| ||||||| || || ||||| | ||||| || || | ||| || || ||
Sbjct 138817 AATCTTAGGGATACGAGTGGAGCCACCAACCAGAACAATGTCGTGAATCTGAGACTTGTC 138876
Query 517750 CAGTTTTGAATC-CAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTG 517808
|| ||| | ||| | | || || || || ||||||||| | | || | |||||
Sbjct 138877 CATTTTAGCATCACGAAGGGAC-TTCTCCACAGGTTCAAGAGTACCACGGAAGAGGTCTG 138935
Query 517809 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAA 517866
||| | |||||| ||| |||||| || || || | || || |||||||| || ||
Sbjct 138936 CACACAATTCTTCAAATCGAGCTCTTGT--GATGGAAGTGTAGAAGTCAATTCCCTCAAA 138993
Query 517867 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 517926
| |||||||| ||||| | | ||| || || || ||||||| || || || | |||
Sbjct 138994 GAGAGAATCAATCTCAATGCTGGCTTGGGTGGATGAGGATAGTGTGCGCTTCGCTCTTTC 139053
Query 517927 ACATGCTGTCCTTAGTCTTCGTA-AG-GCTTTTGCTGATTGATTCAAATCTGTTTTATAT 517984
||| ||||| | |||| |||| || | |||| | || ||| |||| | || |||
Sbjct 139054 ACACGCTGTGCGAAGTCGACGTAGAGCACGTTTGTT--CTGGGTCAGATCTTTCTTGTAT 139111
Query 517985 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCC 518044
|||| |||||| |||| ||| | | || | ||||| ||||||||||| || ||
Sbjct 139112 TTTCGCTTGAACTCTTGGACAAAGTGGTTCACCATGCGATTGTCAAAATCTTCTCCACCA 139171
Query 518045 AATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGA 518104
| | ||| | || | || | | || | ||| | |||||| || | | | |
Sbjct 139172 AGGTGAGTGTCACCAGCAGTCGACTTGACCTCGAAGATTCCATCCTCGATGGTAAGGATG 139231
Query 518105 GTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG 518164
| ||||||| || || || || | |||||||| || ||||| |||| |
Sbjct 139232 GATACATCAAAAGTACCGCCGCCAAGGTCAAAAATGAGAACATTACGTTCTCCAACAGCT 139291
Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224
|| || ||||| ||||| |||| ||||| || || || ||||| ||||||| || ||
Sbjct 139292 TTCTTGTCAAGTCCATAAGCAATGGCAGCTGCTGTGGGCTCATTGATAATTCGCAGTACG 139351
Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284
|| ||||| | || | || | ||||| || || || | || || ||||| |||||
Sbjct 139352 TTCAGACCTGAGATGGTACCAGAGTCTTTGGTTGCCTGACGCTGCGAGTCGTTGAAATAG 139411
Query 518285 GCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGT 518344
|| |||||||| || ||||||| || || |||||||| || || || ||||
Sbjct 139412 GCGGGAACAGTGATCACGGCATTGGTGACGGTTTTACCAAGGTATGCCTCGGCAGTTTCC 139471
Query 518345 TTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCATTT 518404
||||| ||| | | |||||| | || ||||||| | | ||| | || |
Sbjct 139472 TTCATCTTAACCAGGACCATTGAGCTCACTTCTTCTGGGAAGAAAGTCTTCGTCTCTCCT 139531
Query 518405 TGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTAT 518464
| ||| ||||| | | ||||| |||| || ||| ||| |||||||||||| |
Sbjct 139532 TTGTATTGAACTTCGATTTTGGGTTTTCCACCATCACTAACAACGGTAAATGGCCAGTGT 139591
Query 518465 TTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATC 518523
||||| |||| ||||| | |||| | ||| | ||| || | || ||| |||||
Sbjct 139592 TTCATGTCTGCCTGAACTGTGAGGTCCTCAAAGCGGCGACCGATCAGTCTTTTGGCATC 139650
>seq1768
Length=267506
Score = 275 bits (304), Expect = 5e-68
Identities = 949/1463 (65%), Gaps = 33/1463 (2%)
Strand=Plus/Plus
Query 517271 AGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCA 517330
||||| ||||| || |||| |||||| || || || || || || || || | ||||
Sbjct 225940 AGAATTCCATTAGCGTCCATATCAAAAGTCACCTCGATCTGCGGAACTCCGCGAGGAGCT 225999
Query 517331 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 517390
|||| || || | | ||| | || || ||| || || || || | |||
Sbjct 226000 GGTGCAATTCCACTTAGCTCGAATTTACCAAGCAGATTGTTGTCCTTTGTCATAGCACGT 226059
Query 517391 TCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 517450
|||||||| |||| ||| || || ||| ||| |||||| || | || || ||||| | |
Sbjct 226060 TCACCCTCAAAAACTTGAATCGTTACTCCAGGTTGATTGTCAGCGTACGTGGTAAAGA-T 226118
Query 517451 CTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 517509
|||| | || ||||| || ||| | || | || || || |||||||||| || ||
Sbjct 226119 CTGGGTCTTCTTACAGGGGATTCGAGCATTACGTTCTATGATGTTGGTCATAACCCCGCC 226178
Query 517510 TGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTT 517569
|| || || | || ||||||||||| | ||| ||||| |||| | || |||||| |
Sbjct 226179 AGCAGTCTCAATCCCCAGAGAAAGAGGGGCGACGTCAACCAGGAGGACATCTTGAAGGCT 226238
Query 517570 T----TCATCAGTT--TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 517623
|| | || | ||| ||||||||||| || | |||||| || || || ||
Sbjct 226239 GGAGGTCTTGCTTTCTTCTCCACTGAGAATAGCTGCCTGTACAGCAGCGCCGTAAGCTAC 226298
Query 517624 AGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAG 517683
||||| || ||||| | | ||| || | || |||||||| || || || ||
Sbjct 226299 TGCTTCGTCTGGATTGATGGAGAGATTGAGCTGCTTGCCATTGAAGAAGTTCTGCAGTAG 226358
Query 517684 TTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTG 517742
||| | ||| || ||||| | ||| || ||||||| ||||| || || | || |
Sbjct 226359 GC-TCTGGATCTTGGGTATACGTGTTGAACCACCAACTAGAACAATATCTTGGAT-TGAG 226416
Query 517743 ATTTATC-CAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAAC 517801
||| | || |||| ||| | | | |||||||||| || || | |||||| |||
Sbjct 226417 CTTTTGCTCATCTTTGCATCAAGAAGAGCTTTTTCAACTGGCTCTAATGTCGCTCTGAAC 226476
Query 517802 AAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCT 517861
| |||| ||||||||| || || || || | || | || ||||||| ||
Sbjct 226477 AGATCTGCACAAAGTTCCTCAAAGCGTGCCCTTGAAATTCTAGTATAGAAATCAATGCCA 226536
Query 517862 TCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCA 517921
|| || | || || | ||| | || | | || ||| || || | |||||| ||
Sbjct 226537 TCAAAGAGAGCGTCGATTTCGAGGGTTGCCTCGGTACTAGAGGAAAGAGTACGTTTTGCT 226596
Query 517922 CGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTT-TTGCTGATTGATTCAAATCTGTTTT 517980
|||||| ||| || | | | || | || ||| | ||| | | ||| | ||
Sbjct 226597 CGTTCAGCTGCAGTACGCAAACGGCGAATAGCACGTTGGTTATTCCTGAGATTCT-TCTT 226655
Query 517981 ATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAATCTTCA 518038
|||||||||| || |||| || | ||| | ||||| || ||||| |||||
Sbjct 226656 GTATTTTCTCTCAAATTCTTTTGCAAA--ATGCTCGACAAGCCGCGAGTCAAAGTCTTCC 226713
Query 518039 CCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT---CAAGA 518095
|| ||||| | ||||| ||||| || | |||| | ||| || | ||| |||
Sbjct 226714 CCACCCAAATGAGTATCTCCTGCAGTTGACTTTACCTCGAATAGCGAACCTTGATCAATT 226773
Query 518096 GACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT 518155
|||| | | |||||| |||||||||||||| ||||||||| || || || ||||
Sbjct 226774 GACAGGATCGACACATCAAAGGTTCCACCACCCAGATCAAAAATCAGAACGTTTCGTTCT 226833
Query 518156 TTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATT 518215
| | |||| || || || ||||| || | || ||||| || || || || ||||||
Sbjct 226834 CCCTGTAGGTTCTTGTCTAGTCCATAAGCTAGGGCGGCAGCTGTAGGCTCGTTGATAATT 226893
Query 518216 CTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCG 518275
||||| || || | || || || |||| |||||||| || || || || || || |||
Sbjct 226894 CTCAAGACGTTGATGCCGGCTATGGTTCCCGCATCTTTGGTTGCCTGCCTCTGAGAGTCG 226953
Query 518276 TTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTT 518335
|| || || || || ||||||||||| || || | | | || || | ||||
Sbjct 226954 TTGAAGTAGGCTGGGACAGTAATAACTGCGTCTTTGATCTTTTGTCCGAGGAAAGCCTCG 227013
Query 518336 GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTG 518395
|| || | ||||||||| | | || |||||| |||| ||||||| ||| |
Sbjct 227014 GCTGTCTCCTTCATTTTAGTCAGAACCATTGAACTGATTTCTTCTGGG-----TTGAATC 227068
Query 518396 GATTCATTTTGATATGATACT-----TCAAAATATGGTTTATTACCAACATTAATAACTT 518450
| || | | | | | ||| || | | ||||| | | || |||
Sbjct 227069 GTTTTTTCTCGCCACAAAACTCCACCTCGATCTTGGGTTTTCCTGCCTCTCCAACAACGC 227128
Query 518451 TAAATGGCCAGTATTTCATATCTGATTGAACACTTTGG-TCATTAAAATCTCTACCAATT 518509
|| ||||| | || || || || | |||||| |||| ||| | || ||
Sbjct 227129 GGAAAGGCCAATGCTTGATGTCATTCTGGA-TCTTTGGATCATCGAAACGCCGGCCGATC 227187
Query 518510 AATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCA 518569
|| || || || || || | ||| || | || || | || | |||| ||||| ||
Sbjct 227188 AAGCGCTTCGCGTCGAACACAGTGTTCGCCGGGTTTAGGGCCACCTGATTCTTGGCAGCG 227247
Query 518570 TCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCT 518629
|| || ||||| | || || || ||||||| ||||| || ||||| || || |||
Sbjct 227248 TCGCCGATCAGCCGCTCGGTATCCGTAAATGCCACATAGCTGGGTGTTGTTCGGTTTCCT 227307
Query 518630 TGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTT 518689
|| ||||| || || ||||| ||||| || | ||||| || || || || | | ||
Sbjct 227308 TGGTCATTTGCGATTATTTCGACTTTTCCTTGCTGCCAAACTCCGACGCAGGAATACGTC 227367
Query 518690 GTTCCTAAATCAATACCAATAGC 518712
|| || | ||||| || || ||
Sbjct 227368 GTACCAAGGTCAATTCCGATTGC 227390
>seq1846
Length=281985
Score = 123 bits (136), Expect = 2e-22
Identities = 174/241 (72%), Gaps = 5/241 (2%)
Strand=Plus/Minus
Query 518027 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 518086
||||| |||||||||||||| | || | || |||| |||| ||| | ||
Sbjct 58830 TCAAAGTCTTCACCTCCCAAATGGGTGTCACCGTTTGTAGACACAACTTCGAACACACCG 58771
Query 518087 TCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATC-AAAAATAAGTAC 518145
| |||| || ||| ||| | || ||| || |||||||||| ||| || | |||| ||
Sbjct 58770 TTGTCAATAGTCAAGAGACTGACGTCAAAAGTACCACCACCCAGATCGAATACTAAG-AC 58712
Query 518146 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205
|||| | ||| | | || || |||||||| || |||| |||||||| ||||| ||
Sbjct 58711 ATTCTTCTCT---CCATCCTTCTTGTCAAGACCGTAAGCAATTGCAGCAGCCGTTGGCTC 58655
Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265
||| || ||||||| |||||| ||||||| ||| |||| |||||||| || || ||| |
Sbjct 58654 ATTTATGATTCTCATAACATTCAGACCAGAAATAGTTCCAGCATCTTTGGTTGCCTGTTT 58595
Query 518266 T 518266
|
Sbjct 58594 T 58594
>seq2824
Length=230198
Score = 100 bits (110), Expect = 2e-15
Identities = 99/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227
||||| | ||||| || ||||||||||| |||||||| || |||| ||| | ||| |||
Sbjct 23363 TTATCCATGCCATAAGCTAAAGCAGCAGCTGTTGGTTCGTTGATAACTCTGAGAACGTTA 23422
Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287
|| || |||||| || ||||| ||||| ||||| || || ||||| || || || ||
Sbjct 23423 AGGCCGGCAATTTGCCCAGCATCCTTAGTTGCTTGCCTCTGAGAATCATTGAAGTAGGCC 23482
Query 518288 GGAACAGT 518295
||||| ||
Sbjct 23483 GGAACCGT 23490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780597953841238
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