Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10] 4,523 sequences; 239,677,193 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq4498 113 6e-20 >seq4498 Length=49303 Score = 113 bits (124), Expect = 6e-20 Identities = 234/348 (67%), Gaps = 3/348 (1%) Strand=Plus/Minus Query 112272 GATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTAC 112331 ||| ||||| |||||| | || ||||| || ||||| |||||||| ||||| ||| Sbjct 42130 GATCTGTGGTTAGCTATCATGAACTCTCAGGTTGAAACTGGCACACCATACATGCTGTAC 42071 Query 112332 AAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAAC 112391 ||||| ||| || | || |||||| |||| |||| ||||| | || Sbjct 42070 AAAGATCACTGCAATCGCAAATCAAATCAACAGAACGTGGGCACAATCAAATGCAGTAAT 42011 Query 112392 CTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCA 112451 || || || ||||| | |||| | || | || || ||||| ||||| || ||| Sbjct 42010 CTTTGCACTGAAATTATAGAATATTCAAGCCCTGAAGAAGTTGCTGTTTGTAATCTAGCA 41951 Query 112452 TCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTC 112511 || || ||| | || || ||| || || |||||||| |||| | |||||||| Sbjct 41950 TCGATTGCTGTTAACATGTTTGTTACCCCGGA---AAAGACATACGATTTTAAAAAACTC 41894 Query 112512 CACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTAC 112571 | |||||||| |||| || | | ||||| |||| | ||||||||| || | || Sbjct 41893 AAGGAAGTTACCAAAATCGTAGCCTACAACCTGAACAAAATTATTGATATCAACTACTAT 41834 Query 112572 CCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 112619 || || ||| ||||||||||||||||| | ||||||||| Sbjct 41833 CCGATTCCTGAAGCTGAAAAATCTAATATGAGACATAGACCAATTGGT 41786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620707304776560