Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10] 4,523 sequences; 239,677,193 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq3919 105 8e-18 >seq3919 Length=163912 Score = 105 bits (116), Expect = 8e-18 Identities = 119/156 (76%), Gaps = 4/156 (3%) Strand=Plus/Plus Query 36810 TATTTTTCCTTCATTTTTTAAAAATCTTCATCTAACGTAAATTTTATTTCCTTATTACTA 36869 || ||||| ||| ||||||||||||| |||||| || || | | || || || Sbjct 141403 TAATTTTCTTTC--TTTTTAAAAATCTGCATCTATTGTGAACTCACTCTCGTTCTTTTCT 141460 Query 36870 TTCATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCC 36928 |||| || ||| |||||| |||||||| || | |||| ||||| ||||| ||||| || Sbjct 141461 CTCATCACGCCCCATTTTTGGTATTCTCCGAC-CTTCTTCTCGAAGAAATTAGTCTTACC 141519 Query 36929 TTCTAGTGATATATTTTCCATAAAATCAAATGGATT 36964 |||||| ||||| |||||||| ||||| || ||||| Sbjct 141520 TTCTAGCGATATGTTTTCCATGAAATCGAACGGATT 141555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592283311888920