Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10] 4,523 sequences; 239,677,193 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3919 87.8 3e-12 >seq3919 Length=163912 Score = 87.8 bits (96), Expect = 3e-12 Identities = 153/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 25786 CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAG 25845 ||||| |||||| || || | ||| | || | |||||| ||||| |||| Sbjct 142435 CTGTTCAATGCCATTGAAAACCTTCCCTGTGTCGCTAAGAAGGCAAACTGGGCGCTGAAC 142376 Query 25846 TGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAG 25905 ||||| |||| | | || || | || || ||||| | || |||||||| || || || Sbjct 142375 TGGATAAACAACGACAGTGCAAACTTCGGTGAGCGAGTCGTTGCCTTTGCAGCAGTCGAA 142316 Query 25906 GGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATG 25965 || ||||| ||||| || || || |||| ||||||||||| || || ||| Sbjct 142315 GGGATCTTCTTCAGTGGAAGTTTCGCCTCCATATTCTGGCTCAAAAAGCGTGGATTGATG 142256 Query 25966 CCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008 || || ||| ||| |||||||||||| ||||||||||| Sbjct 142255 CCAGGTCTGACCTTCAGCAACGAGCTCATTTCCAGGGACGAGG 142213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928792285437120