Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10] 4,523 sequences; 239,677,193 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq4402 91.5 3e-13 >seq4402 Length=410039 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/176 (74%), Gaps = 8/176 (5%) Strand=Plus/Minus Query 182735 TGAGTAATTTATCTCCGTGGTTACATTTTGGACATG-TATCTCCACAACG-TGTTGCTTT 182792 |||| |||||||| || ||||| ||||| || |||| ||||| |||||| ||| ||| Sbjct 324613 TGAGCAATTTATCACCATGGTTTCATTTCGG-CATGATATCTGTACAACGATGTATCTT- 324556 Query 182793 AGAAGTATTAAAATGTATACGAGAAAACaaaaaaaaC--GTTGAAACGTTTATAGATGAA 182850 |||||| | ||||| ||| || | || |||||| || |||| || || || ||| Sbjct 324555 AGAAGTGTCAAAAT--ATAAGAACAGTCACAAAAAATCTGTCGAAAGTTTCATGGAAGAA 324498 Query 182851 ATAATTGTAAGAAGAGAACTATCGGATAATTTTTGTTACTATAATAAACATTACGA 182906 || || || |||||| | || ||||||||||||| ||||| ||||||| || Sbjct 324497 GCTATAGTTAGGAGAGAATTGTCCGATAATTTTTGTTTTTATAACGAACATTATGA 324442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903360123389280