Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10] 4,523 sequences; 239,677,193 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq491 100 4e-16 >seq491 Length=342197 Score = 100 bits (110), Expect = 4e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 140508 AATTTTTGTTTAGGAAAACACCTTTCAAGTGAAAACGATCTTTTAAAAGATCAACGCGGG 140567 |||||||| | || |||||| | |||||| | ||||| || ||||||||||| || Sbjct 273394 AATTTTTGCCTGGGGAAACACTTGAGTAGTGAAGAAGATCTCTTGAAAGATCAACGGGGC 273335 Query 140568 TCTCCCGCATATATTTCTCCGGATGTTATCAGCGGTAAACCATATTTAGGTAAACCGTCT 140627 || || || || || || || |||||| | | ||||| || || | || ||||| ||| Sbjct 273334 TCACCTGCTTACATATCACCCGATGTTCTATGTGGTAAGCCGTACCTCGGAAAACCATCT 273275 Query 140628 GATATGTGGGCGCTTGGAGTAACATTGTATACCATGTTGTTTGGGCAATTTCCATTTTAT 140687 || |||||||| ||||| || | | || ||| | | |||||| || |||||||| Sbjct 273274 GACATGTGGGCACTTGGTGTGGTGCTCTTCACGATGCTCTATGGGCAGTTCCCATTTTAC 273215 Query 140688 GATGCGTCTCCAACAGAGCTCTTTAGAAAAATAAA 140722 || |||||| | | || || |||||||| Sbjct 273214 GACAGTAACCCAACACAATTGTTCAGCAAAATAAA 273180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 704542564672560