Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10] 4,523 sequences; 239,677,193 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq558 95.1 3e-14 >seq558 Length=345963 Score = 95.1 bits (104), Expect = 3e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 305336 TTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTA 305395 |||||| | ||||| ||||| ||||| | ||| ||||||||||||| |||||||||| Sbjct 95609 TTCAATCGACAACCTTCACTACATAAGCTCAGTATAATGGCTCATAAAGCCAAAGTATTA 95668 Query 305396 TCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGAT 305455 || || |||| || | | ||| || |||||||| ||||| || |||||| Sbjct 95669 GAACACCGAACCTTCAGATTTAACGAATGTGTCTGCACGCCTTACAATGCCGACTTTGAT 95728 Query 305456 GGAGATGAAATGAATATGCATGTACCTCAA 305485 || ||||||||||| | ||| |||| ||| Sbjct 95729 GGTGATGAAATGAACCTACATTTACCACAA 95758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186744023085603