Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10] 4,523 sequences; 239,677,193 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq3919 86.0 5e-12 >seq3919 Length=163912 Score = 86.0 bits (94), Expect = 5e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 43677 TGCTTACAGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGC 43736 |||||| ||| ||||| || || ||| | || || ||||||| | ||||| ||| Sbjct 143683 TGCTTAGAGATAATCCTCAGAGATTCGTCATATTCCCGATTCAATGGCCGGACATTTGGA 143624 Query 43737 AAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAG 43796 ||||||| ||||| ||| | || ||||||||||||| |||||||| ||||| | |||| Sbjct 143623 AAATGTATAAAAAGGCAGAAGCCTCATTTTGGACAGTCGAAGAAGTAGATTTATCCAAAG 143564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397434090610615