Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10] 4,523 sequences; 239,677,193 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq47 468 2e-126 seq1768 349 1e-90 seq3846 201 3e-46 seq4011 105 2e-17 seq713 96.9 1e-14 seq1846 93.3 1e-13 >seq47 Length=398807 Score = 468 bits (518), Expect = 2e-126 Identities = 891/1303 (68%), Gaps = 17/1303 (1%) Strand=Plus/Minus Query 349445 AAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAA 349504 ||||| | || ||||| |||||| | || |||| ||||| | || || ||| || Sbjct 139593 AAACACTGGCCATTTACCGTTGTT---AGTGATGGTGGAAAACCCAAAATCGAAGTTCAA 139537 Query 349505 TATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAA 349563 || ||||| || || || || || || || |||||| | |||||||| | ||||| Sbjct 139536 TACAAAGGAGAGACGAAGACT-TTCTTCCCAGAAGAAGTGAGCTCAATGGTCCTGGTTAA 139478 Query 349564 AATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGT 349623 |||||||||| ||| || ||||| | ||| |||| || || |||| || || ||||| Sbjct 139477 GATGAAGGAAACTGCCGAGGCATACCTTGGTAAAACCGTCACCAATGCCGTGATCACTGT 139418 Query 349624 ACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGG 349683 || |||||||| || || | |||||| ||||| ||||| |||| | ||| | || Sbjct 139417 TCCCGCCTATTTCAACGACTCGCAGCGTCAGGCAACCAAAGACTCTGGTACCATCTCAGG 139358 Query 349684 GTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGA 349743 | || || || |||| || ||||| ||||| || || || ||||| ||||| ||||| Sbjct 139357 TCTGAACGTACTGCGAATTATCAATGAGCCCACAGCAGCTGCCATTGCTTATGGACTTGA 139298 Query 349744 TAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGA 349803 || | || |||| ||| |||| |||||||| | || || ||||||||||| Sbjct 139297 CAAGAAAGCTGTTGGAGAACGTAATGTTCTCATTTTTGACCTTGGCGGCGGTACTTTTGA 139238 Query 349804 TGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATAC 349863 |||||| | || || | || || ||||| || || || || | ||||||||||| || Sbjct 139237 TGTATCCATCCTTACCATCGAGGATGGAATCTTCGAGGTCAAGTCGACTGCTGGTGACAC 139178 Query 349864 ACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAA 349923 || |||||||||||||||||||| ||||| | || || ||||| |||| || || Sbjct 139177 TCACCTTGGTGGAGAAGATTTTGACAATCGCATGGTGAACCACTTTGTCCAAGAGTTCAA 139118 Query 349924 GCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGC 349983 ||| || || | ||| | | || | || | ||||| || | || || Sbjct 139117 GCGAAAATACAAGAAAGATCTGACCCAGAACAAACGTGCTCTACGTCGACTTCGCACAGC 139058 Query 349984 GTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTC 350043 ||||||| | || ||||| | |||| || | |||||| || ||||| |||||||| Sbjct 139057 GTGTGAAAGAGCGAAGCGCACACTATCCTCATCCACCCAAGCCAGCATTGAGATTGATTC 138998 Query 350044 TCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATG 350103 ||| ||| || | || |||| | || || ||| | ||||| ||||||||||| || Sbjct 138997 TCTCTTTGAGGGAATTGACTTCTACACTTCCATCACAAGAGCTCGATTTGAAGAATTGTG 138938 Query 350104 TATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAAT 350163 | || || || | | || | || |||||||| || | ||||| ||||| Sbjct 138937 TGCAGACCTCTTCCGTGGTACTCTTGAACCTGTGGAGAAGTCCCTTCGTGATGCTAAAAT 138878 Query 350164 GTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGT 350223 | ||| ||||||| | || | ||| | |||||||| || || ||||| || || | Sbjct 138877 GGACAAGTCTCAGATTCACGACATTGTTCTGGTTGGTGGCTCCACTCGTATCCCTAAGAT 138818 Query 350224 TCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGA 350283 ||| || | | || || || |||||||| |||| || ||| || || || || Sbjct 138817 TCAGAAGCTCTTGCAGGACTTCTTCAATGGCAAGGAACTGAATAAATCTATCAACCCTGA 138758 Query 350284 TGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTC 350343 ||||||||| || || || || ||||| || || | ||| | |||| ||||| || Sbjct 138757 TGAAGCTGTAGCTTACGGAGCGGCTGTCCAAGCTGCCATTCTCCATGGAGATAAG---TC 138701 Query 350344 TAA--AATTG-ATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAAC 350400 | || || | || || | || ||||||| ||||| ||||| ||||| | ||||| Sbjct 138700 AGAGGAAGTGCAGGACCTTCTTCTCTTAGATGTTACTCCCCTTTCTCTTGGTATCGAAAC 138641 Query 350401 TTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTC 350460 | |||| | || ||||||| ||||| | || | || | || || || || | Sbjct 138640 TGCTGGCGGTGTCATGACTGCACTTATCAAGCGTAACACAACCATTCCAACTAAGCAGAC 138581 Query 350461 CCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGG 350520 ||||| || |||| | ||| ||||||||||| | ||| || ||||| | ||||| Sbjct 138580 ACAAACGTTCACTACCTATGCCGATAATCAGCCTGGTGTACTCATCCAAGTCTACGAAGG 138521 Query 350521 TGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAATTCC 350580 ||| || || ||||| || |||||| ||||||| | ||| || || | ||||| Sbjct 138520 TGAGCGAGCAATGACTAAGGACAATAATCTACTTGGAAAGTTTGAGCTCAGCGGGATTCC 138461 Query 350581 ACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATGGTAT 350640 ||| || |||| |||||||| |||||||| |||| || || || | |||||||| Sbjct 138460 ACCGGCACCCCGAGGCGTTCCTCAAATTGAAGTAACTTTTGACATCGACGCTAATGGTAT 138401 Query 350641 TTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAAAAGTAGTAAGGTAGAAATTACTAA 350700 | ||||| | || ||||| ||||| | ||||||| | |||| | |||||||| Sbjct 138400 CCTGAATGTATCTGCTGTTGACAAATCGACTGGTAAAGAAAATAAGATCACTATTACTAA 138341 Query 350701 TGATAAATCTAGAC-TTTCA--AAAGAAGATATTGAGAAAATG 350740 ||| ||| ||| || | |||||||| ||||| | |||| Sbjct 138340 TGACAAA---GGACGCTTGAGCAAAGAAGACATTGAAAGAATG 138301 Score = 208 bits (230), Expect = 2e-48 Identities = 653/1004 (65%), Gaps = 8/1004 (1%) Strand=Plus/Plus Query 182792 CTCATCTTCTTTAGCATACTTTTCAGCATCCATTGTCATTCTTTCTATTTCATCTTTAGA 182851 |||||| || || ||||||||| || || | ||||||||| || || ||||| Sbjct 138265 CTCATCCTCACTACGATACTTTTCTGCCTCGTTGACCATTCTTTCAATGTCTTCTTTGCT 138324 Query 182852 AAGATGACCTGCATCATTTGTAATTACTACATTACTAGTTACTCCAGTTGATTTTTCAAG 182911 | | ||| ||||| ||||| | ||| | | ||||| ||||| |||| Sbjct 138325 CAAGCGTCCTTTGTCATTAGTAATAGTGATCTTATTTTCTTTACCAGTCGATTTGTCAAC 138384 Query 182912 TGCGCTAACATTTAAAATACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAAC 182971 || ||||| | |||||||||| ||| | ||||| | ||||||||| || ||||| Sbjct 138385 AGCAGATACATTCAGGATACCATTAGCGTCGATGTCAAAAGTTACTTCAATTTGAGGAAC 138444 Query 182972 ACCTCGTGGCATTGGTGGAATTCCAGTTAAAGTAAATTCACCTAATTTATTATTATCTTT 183031 ||||| || |||||||| || | | ||| | || | | |||||| || || Sbjct 138445 GCCTCGGGGTGCCGGTGGAATCCCGCTGAGCTCAAACTTTCCAAGTAGATTATTGTCCTT 138504 Query 183032 AGTTCTTGCTCTCTCGCCTTCATATACTTGAAT-AGTAACTGCTGGCTGATTATCACTAT 183090 ||| |||||| ||| ||||| || ||||| || |||| | | ||||||||||| || Sbjct 138505 AGTCATTGCTCGCTCACCTTCGTAGACTTGGATGAGTA-CACCAGGCTGATTATCGGCAT 138563 Query 183091 AAGTAGAAAAAACTTGCTTTTTATTAATAGGAATAGTTGAATTTCGCGGAACAATTACAG 183150 | |||| || ||| | | ||| | ||||| |||| || ||| | || | ||| Sbjct 138564 AGGTAGTGAACGTTTGTGTCTGCTTAGTTGGAATGGTTGTGTTACGCTTGATAAGTGCAG 138623 Query 183151 TCATTACTTCTCTGGCAGTTTCTAATCCTAATGATAATGGTGCTACATCTAGTAATAATA 183210 |||| || | | |||||||| | || | || | || | ||||||| | | | Sbjct 138624 TCATGACACCGCCAGCAGTTTCGATACCAAGAGAAAGGGGAGTAACATCTAAGAGAAGAA 138683 Query 183211 AATCTGATGTTTTATCTGATTTAATATCACTTAAAATTGCAGCTTGAACAGCTGCACCAT 183270 || || ||||| ||| || | ||| |||||||| ||||| || || | Sbjct 138684 GGTCCTGCACTTCCTCTGACTTATCTCCATGGAGAATGGCAGCTTGGACAGCCGCTCCGT 138743 Query 183271 ATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATTCTTTGCCATT-AAAAAATTCT 183329 | || ||||||||||| ||||| || || | | ||| |||||||| || || | || Sbjct 138744 AAGCTACAGCTTCATCAGGGTTGATAGATTTATTCAGTTCCTTGCCATTGAAGAAGTCCT 138803 Query 183330 GAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACTACTTCATCG 183389 | ||| | | ||||| || || || | ||| || ||||| || | || | || | Sbjct 138804 GCAAG-AGCTTCTGAATCTTAGGGATACGAGTGGAGCCACCAACCAGAACAATGTCGTGA 138862 Query 183390 ATAT--TACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTCCATAGTTT 183447 || | |||| | | |||| | ||| | || || ||||| || | ||| Sbjct 138863 ATCTGAGACTTGTCC--ATTTTAGCATCACGAAGGGACTTCTCCACAGGTTCAAGAGTAC 138920 Query 183448 TTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGaaaaaaaGT 183507 | || | ||| ||| || ||||| |||| ||||| || | || | | |||| Sbjct 138921 CACGGAAGAGGTCTGCACACAATTCTTCAAATCGAGCTCTTGTGATGGAAGTGTAGAAGT 138980 Query 183508 CAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGATAATGTTC 183567 |||| || | | | | |||||||| ||||| | ||| || ||||| |||| ||| | Sbjct 138981 CAATTCCCTCAAAGAGAGAATCAATCTCAATGCTGGCTTGGGTGGATGAGGATAGTGTGC 139040 Query 183568 TTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATCTGTAATAT 183627 || |||| |||||| ||||| | |||||||||| | | | || | || | || Sbjct 139041 GCTTCGCTCTTTCACACGCTGTGCGAAGTCGACGTAGAGCACGTTTGTTCTGGGTCAGAT 139100 Query 183628 CTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTATCAAAAT 183687 ||| || | ||||| || || || | ||| || | | | | | ||||||| Sbjct 139101 CTTTCTTGTATTTTCGCTTGAACTCTTGGACAAAGTGGTTCACCATGCGATTGTCAAAAT 139160 Query 183688 CTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAA 183747 |||| ||||| | || || || |||||||| | || || || || ||||| || || | Sbjct 139161 CTTCTCCACCAAGGTGAGTGTCACCAGCAGTCGACTTGACCTCGAAGATTCCATCCTCGA 139220 Query 183748 TATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAAA 183791 | | | || ||||||||||| ||||| || || | |||||| Sbjct 139221 TGGTAAGGATGGATACATCAAAAGTACCGCCGCCAAGGTCAAAA 139264 >seq1768 Length=267506 Score = 349 bits (386), Expect = 1e-90 Identities = 966/1468 (66%), Gaps = 40/1468 (3%) Strand=Plus/Minus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 |||| || ||||| || | ||||| || ||||| || || | |||||||| | | Sbjct 227392 CCGCAATCGGAATTGACCTTGGTACGACGTATTCCTGCGTCGGAGTTTGGCAGCAAGGAA 227333 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 || |||||||| |||||||| ||||| ||| ||||||| || || || ||||||| Sbjct 227332 AAGTCGAAATAATCGCAAATGACCAAGGAAACCGAACAACACCCAGCTATGTGGCATTTA 227273 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 | || || ||||| |||| || || |||| || ||||| | || || || | Sbjct 227272 CGGATACCGAGCGGCTGATCGGCGACGCTGCCAAGAATCAGGTGGCCCTAAACCCGGCGA 227213 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACA 349434 | || || || || || ||||| | || || | |||| ||| |||| | || | Sbjct 227212 ACACTGTGTTCGACGCGAAGCGCTTGATCGGCCGGCGTTTCGATGATCCAAAGATCCAGA 227153 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 || ||| || |||| ||||| |||||| | | | || ||||| | || Sbjct 227152 ATGACATC--AAGCATTGGCCTTTCCGCGTTGTTGGAGAGGCAGGA---AAACCCAAGAT 227098 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 ||||| || | | || || |||||| ||| || |||||||| |||||||| Sbjct 227097 CGAGGTGGAGTTTTGTGGCGAGAAAAAACGATTCAACCCAGAAGAAATCAGTTCAATGGT 227038 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | | |||||||||||| | || || || | | || ||| | | || || || Sbjct 227037 TCTGACTAAAATGAAGGAGACAGCCGAGGCTTTCCTCGGACAAAAGATCAAAGACGCAGT 226978 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 ||||||||| |||||||| || || || | ||| | ||||| |||||||| || | Sbjct 226977 TATTACTGTCCCAGCCTACTTCAACGACTCTCAGAGGCAGGCAACCAAAGATGCGGGAAC 226918 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 ||| || || | || || | ||||| || || || || || ||||| || | || || Sbjct 226917 CATAGCCGGCATCAACGTCTTGAGAATTATCAACGAGCCTACAGCTGCCGCCCTAGCTTA 226858 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 ||| || || || | | |||| ||| |||| ||||||||| | |||||||| Sbjct 226857 TGGACTAGACAAGAACCTACAGGGAGAACGAAACGTTCTGATTTTTGATCTGGGTGGTGG 226798 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGG---AATTTTTGAAGTTAAAGCAAC 349851 || |||||||| || | || || |||| | || | || || || || |||| Sbjct 226797 AACCTTTGATGTGTCGATCCTGTCAATTGATCAAGGTTCGCTATTCGAGGTAAAGTCAAC 226738 Query 349852 TGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGT 349911 ||| || ||||| ||| | ||||| ||||| ||||| || || || |||||||| Sbjct 226737 TGCAGGAGATACTCATTTGGGTGGGGAAGACTTTGACTCGCGGCTTGTCGAGCATTTTGC 226678 Query 349912 TAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCG 349971 ||||||||| || | || || | || | | |||| | | || || || || Sbjct 226677 AAAAGAATTTGAGAGAAAATACAAGAAGAATCTCAGGAATAACCAACGTGCTATTCGCCG 226618 Query 349972 CCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACC----CAAACCT 350027 | | ||||| |||||| || || ||| | | || |||| |||| ||| ||| Sbjct 226617 TTTGCGTACTGCAGCTGAACGAGCAAAACGTACTCTTTCCTCTAGTACCGAGGCAACCCT 226558 Query 350028 CTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTC 350087 | ||||| || |||| |||||||| ||||||| | | ||| || | || | Sbjct 226557 C----GAAATCGACGCTCTCTTTGATGGCATTGATTTCTATACTAGAATTTCAAGGGCAC 226502 Query 350088 GGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTAT 350147 | ||||| ||| | ||| ||||| || ||||| ||| | || || || ||||||| Sbjct 226501 GCTTTGAGGAACTTTGTGCAGATCTGTTCAGAGCGACATTAGAGCCAGTTGAAAAAGCTC 226442 Query 350148 TAAAAGATGCAAAAATGTCCAAAA-ATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCT 350206 | |||||||| ||| ||||| ||| || | || | ||| ||||||||||||| Sbjct 226441 TTCTTGATGCAAAGATGAGCAAAAGCTCA-ATCCAAGATATTGTTCTAGTTGGTGGTTCA 226383 Query 350207 ACACGTATTCCAAAAGTTCAACAG-TTACTATCTGAGTTTTTTAATGGCAA--AGAACCT 350263 |||||||| || ||| || | || |||| | || || |||||||| || | Sbjct 226382 ACACGTATACC-CAAGATCCAGAGCCTACTGCAGAACTTCTTCAATGGCAAGCAGCTCAA 226324 Query 350264 TCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATT 350323 ||| || || |||||||| ||||| || || || || |||||||| |||||| ||||| Sbjct 226323 TCT--CTCCATCAATCCAGACGAAGCAGTAGCTTACGGCGCTGCTGTACAGGCAGCTATT 226266 Query 350324 TTATCTGG------AAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACT 350377 | ||| || |||| || | || | ||| | | || | || || | Sbjct 226265 CTCAGTGGAGAAGAAAGCAAGACCTCCAGCCTTCAAGATGTCCTCCTGGTTGACGTCGCC 226206 Query 350378 CCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAA-A 350436 || ||||| || || | || ||| |||| | || ||||| | || ||||| Sbjct 226205 CCTCTTTCTCTGGGGATTGAGACTGCTGGCGGGGTTATGAC----CAACATCATAGAACG 226150 Query 350437 TAGTACT---GTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCC 350493 || | || | || || ||| |||| | ||| | || | || || ||||| || Sbjct 226149 TAATGCTCGAATCCCCTGTAAGAAGACCCAGATCTTTACCACGTACGCTGACAATCAACC 226090 Query 350494 AGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACT 350553 | ||||| |||||||| ||||| |||||||||||| || || || || ||| || Sbjct 226089 TGGAGTAACGATTCAAGTTTTTGAGGGTGAACGTGCTATGACAAAGGACAACAATCTGCT 226030 Query 350554 TGGAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGT 350613 ||| |||| ||||||| |||| ||||| ||| | |||||||| ||||| || || Sbjct 226029 TGGTAAATTCGAGCTAAGTGGAATTGCACCAGCTCCTCGCGGAGTTCCGCAGATCGAGGT 225970 Query 350614 CTCTTTCGATATTGATTCAAATGGTATT 350641 |||| ||||| || | ||||| ||| Sbjct 225969 GACTTTTGATATGGACGCTAATGGAATT 225942 >seq3846 Length=171336 Score = 201 bits (222), Expect = 3e-46 Identities = 183/231 (79%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| ||||||| || ||||| |||||||| || ||||| |||||||||||||| || Sbjct 15196 CATACCGCCACGTAGTCGGAGAACTAGATGAAGGGTGGACTCCTTTTGAATATTATAGTC 15255 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || ||||||||||| || |||||||||||||| |||| | ||||| || || Sbjct 15256 GGAAAGAGTACGCCCATCTTCCAGCTGTTTTCCAGCAAAAATTAATCTCTGCTGGTCTGG 15315 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || ||||| || || || |||||||| ||||| || || || || | |||||||| || Sbjct 15316 TGGGATTCCCTCCTTGTCTTGAATTTTTGCTTTCACGTTCTCTATTGTATCAGATGCCTC 15375 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| | |||| ||||||||| || || ||||| |||||||| ||||| Sbjct 15376 GACTTCCAAAGTAATTGTCTTTCCAGTAAGAGTTTTGACAAAAATTTGCAT 15426 Score = 185 bits (204), Expect = 3e-41 Identities = 182/235 (77%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| || || || | | || ||||| || || || || |||||||| || || | Sbjct 15648 TTTGCATCCCTCCTCGCAGCCGAAGGACAAGGTGCAGGGTGGATTCTTTTTGGATGTTGT 15707 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || |||||||| |||||||||||||||||||| | ||| ||||| | Sbjct 15708 AGTCCGAAAGAGTGCGGCCATCTTCGAGTTGTTTTCCAGCAAAGATCAAACGCTGCTGGT 15767 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | ||||||||||| ||||| |||||||||||||| || ||||| ||||| | || || | Sbjct 15768 CTGGAGGAATTCCCTCTTTGTCCTGAATTTTAGCCTTCACATTCTCAATAGTGTCCGAAG 15827 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | || | ||||||||| |||| |||||| |||||||| ||||| Sbjct 15828 CCTCAACCTCCAAAGTGATTGTCTTTCCAGTTAATGTTTTGACAAAAATTTGCAT 15882 Score = 178 bits (196), Expect = 4e-39 Identities = 181/236 (77%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| |||||||||| || ||||| | ||||||||||| ||||| || ||||| | Sbjct 15876 TTTGCATCCCACCACGTAGTCGGAGAACCAAGTGAAGAGTAGATTCTTTCTGGATATTGT 15935 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || ||||| || || || |||||||| || || ||||||||||| | ||| ||||| | Sbjct 15936 AGTCTGATAAGGTCCGTCCGTCTTCAAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGT 15995 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | ||||||||||| || || || |||||||| || |||||||| ||||| | || || | Sbjct 15996 CTGGAGGAATTCCCTCCTTGTCTTGAATTTTCGCCTTTACATTTTCAATAGTGTCGGAGG 16055 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 |||||||| | || | || || || || || || || || ||||| |||||| Sbjct 16056 CCTCAACTTCCAACGTGATGGTTTTGCCAGTGAGAGTCTTAACGAAAATTTGCATT 16111 Score = 172 bits (190), Expect = 2e-37 Identities = 179/235 (76%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||| ||||| | |||| ||| ||||| | || || || |||||||| || | Sbjct 15420 TTTGCATACCTCCACGCAGCCTTAAAACCAGATGTAAGGTTGATTCCTTTTGAATGTTGT 15479 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | ||||| || ||||| ||||||||||| || |||||||||||||| || || || || | Sbjct 15480 AGTCAGACAAGGTTCGTCCATCTTCAAGCTGCTTTCCAGCAAAGATGAGTCGCTGTTGGT 15539 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || ||||| |||||||| || || ||||| |||||||| || ||||| | || || | Sbjct 15540 CTGGTGGAATGCCTTCTTTGTCTTGGATTTTTGCTTTTACGTTCTCAATTGTGTCGGAGG 15599 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| | |||| || || || || || || || |||||||| ||||| Sbjct 15600 CCTCGACTTCCAAGGTAATGGTTTTGCCAGTAAGAGTCTTCACAAAAATTTGCAT 15654 Score = 168 bits (186), Expect = 2e-36 Identities = 176/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| || || | | || || ||||| || || || || ||||| || |||||||| Sbjct 16792 CATACCTCCGCGAAGACGAAGGACTAGATGGAGGGTGGATTCCTTTTGGATGTTATAATC 16851 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || |||||||| || |||||||| |||||||| | | ||||| || || Sbjct 16852 GGAAAGGGTGCGGCCATCTTCGAGCTGTTTTCCTGCAAAGATCAATCTCTGCTGGTCTGG 16911 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||||| ||||| |||||||| || || || ||||| || |||| |||||||| ||| Sbjct 16912 TGGAATTCCCTCTTTGTCCTGAATCTTGGCCTTCACATTTTCGATCGTATCAGATGCTTC 16971 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| || || | ||||| || || | || || |||||||||||||| Sbjct 16972 AACTTCGAGGGTGATGGTCTTCCCCGTCAAGGTCTTGACAAAAATCTGCAT 17022 Score = 161 bits (178), Expect = 3e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | ||||| ||||||||||||||||| || ||||| || || || || Sbjct 14972 CCACCACGGAGCCGAAGAACCAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTGAA 15031 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | || ||||||||||| || ||||| || || || |||| | ||||| || |||||| Sbjct 15032 AGGGTACGCCCATCTTCCAGCTGTTTCCCTGCGAATATTAACCTCTGCTGGTCTGGAGGA 15091 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 ||||||||||| || || ||||| || || ||||| ||||| | ||||| | ||||| Sbjct 15092 ATTCCTTCTTTGTCTTGGATTTTGGCCTTGACATTTTCAATTGTGTCAGACGCCTCAACC 15151 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || | || | || || ||||| | ||||| ||||| |||||||| Sbjct 15152 TCCAAGGTGATAGTTTTGCCGGTCAAGGTTTTGACAAAGATCTGCAT 15198 Score = 159 bits (176), Expect = 1e-33 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| || || | | || || |||||||||||||| || || || || |||||||| Sbjct 16564 CATACCTCCGCGGAGACGAAGGACCAGATGAAGAGTAGATTCCTTCTGGATGTTATAATC 16623 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || |||||||| |||||||||| | ||||| || || Sbjct 16624 GGAAAGAGTGCGGCCATCCTCGAGCTGTTTTCCGGCAAAGATTAATCTCTGCTGGTCTGG 16683 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || ||||| ||||| ||||| || || ||||| ||||| ||||||| ||||| | || Sbjct 16684 TGGGATTCCCTCTTTGTCCTGGATCTTTGCTTTCACATTTTCAATCGTGTCAGAAGCCTC 16743 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||||||| || | || || || |||| || || || || |||||||| Sbjct 16744 AACTTCAAGGGTGATGGTTTTGCCAGTTAAGGTCTTCACGAAGATCTGCAT 16794 Score = 149 bits (164), Expect = 2e-30 Identities = 174/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||| ||||| | | || |||||||||||||| || ||||| || || || | Sbjct 16332 TTTGCATACCTCCACGGAGACGAAGGACAAGATGAAGAGTTGATTCTTTCTGGATGTTGT 16391 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 ||||||| | || || ||||| ||||| ||||| || |||||||| | | ||||| | Sbjct 16392 AATCAGAAAGCGTACGGCCATCCTCAAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGT 16451 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || || ||||| || || || |||||||| || || || || ||||| | || || | Sbjct 16452 CTGGTGGGATTCCCTCCTTGTCTTGAATTTTCGCCTTCACGTTTTCAATTGTGTCCGAAG 16511 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || |||||||| |||| || || || |||| || || || || |||||||| Sbjct 16512 CCTCTACTTCAAGGGTAATAGTTTTGCCAGTTAAGGTCTTGACGAAGATCTGCAT 16566 Score = 145 bits (160), Expect = 2e-29 Identities = 173/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| ||||| | | || ||||| | ||| | || || |||||||||||||| | Sbjct 16104 TTTGCATTCCACCTCTCAGTCGAAGAACTAAATGTAAGGTGGATTCTTTTTGAATATTGT 16163 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || || || || || |||||||| || || || || || || | ||| ||||||| Sbjct 16164 AGTCCGACAAAGTACGTCCGTCTTCAAGCTGCTTGCCGGCGAAAATCAAACGCTGCTGAT 16223 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | ||||||||||| ||||| || ||||| || || |||||||| ||||| | || || | Sbjct 16224 CTGGAGGAATTCCCTCTTTGTCTTGAATCTTTGCCTTTACATTTTCAATAGTGTCGGAGG 16283 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| | || | || || || ||||| || || ||||| || ||||| Sbjct 16284 CCTCGACTTCCAACGTGATGGTTTTGCCAGTTAGGGTCTTGACAAAGATTTGCAT 16338 >seq4011 Length=132779 Score = 105 bits (116), Expect = 2e-17 Identities = 213/317 (67%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 349526 TTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCA 349585 ||||| ||||||||||| || || |||||| | || |||||||| | || || || Sbjct 47243 TTTTTCCCCGAAGAAATATCCTCGATGGTTCTCACGAAGATGAAGGAGACCGCCGAGGCC 47302 Query 349586 TATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCC 349645 || | || | ||| | || |||| || || || || || || || || || ||| | Sbjct 47303 TACCTGGGCAAGACAATTACAAATGCGGTGATCACGGTGCCMGCTTACTTCAACGATTCT 47362 Query 349646 CAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATT 349705 || ||| || || || ||| | || |||| | ||| | ||||| || || || ||| Sbjct 47363 CAACGTCAAGCGACGAAGGATTCCGGTGCCATTTCTGGGCTGAATGTCCTCAGGATTATT 47422 Query 349706 AATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaa 349765 |||||||| || || || || || || || ||||| || || | | || || | | Sbjct 47423 AATGAACCGACCGCAGCGGCGATAGCTTACGGGCTCGACAAGAAAGGACACGGGGAGAGA 47482 Query 349766 aaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAA 349825 ||| | || ||||| ||| | || || || || || || || ||| | || || | || Sbjct 47483 AATGTCCTGATTTTCGATCTGGGGGGCGGGACGTTCGACGTGTCAATTCTGACCATCGAG 47542 Query 349826 GAGGGAATTTTTGAAGT 349842 || || || || || || Sbjct 47543 GACGGGATATTCGAGGT 47559 >seq713 Length=327371 Score = 96.9 bits (106), Expect = 1e-14 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | || || | ||||| ||||| ||||| || ||||| ||||| || Sbjct 311365 CCACCACGAAGGCGGAGTACCAAGTGAAGCGTAGATTCTTTCTGGATATTGTAATCGGAA 311306 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | |||| ||||| |||||||| || |||||||| || | ||| ||||||||||| ||| Sbjct 311305 AGAGTTCTTCCATCCTCAAGTTGCTTGCCAGCAAAAATCAAACGCTGCTGATCAGGGGGA 311246 Query 140631 ATTCCT 140636 || ||| Sbjct 311245 ATCCCT 311240 Score = 86.0 bits (94), Expect = 2e-11 Identities = 85/109 (78%), Gaps = 1/109 (1%) Strand=Plus/Minus Query 140630 AATT-CCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAA 140688 |||| ||||||||||| || ||||| ||||| ||||| ||||||| || || | ||| | Sbjct 311046 AATTACCTTCTTTATCTTGTATTTTTGCTTTCACATTTTCAATCGTGTCGGAGGCTTCCA 310987 Query 140689 CTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || | ||| | |||||| || |||| ||||| || || |||||||| Sbjct 310986 CCTCCAATGTGATTGTCTTCCCAGTTAAAGTTTTGACGAATATCTGCAT 310938 >seq1846 Length=281985 Score = 93.3 bits (102), Expect = 1e-13 Identities = 163/234 (70%), Gaps = 5/234 (2%) Strand=Plus/Plus Query 349655 GCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCC 349714 ||||| ||||||||||| | ||| | || | |||||| | ||||| || ||||| || Sbjct 58601 GCAACCAAAGATGCTGGAACTATTTCTGGTCTGAATGTTATGAGAATCATAAATGAGCCA 58660 Query 349715 ACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTT 349774 || ||||| |||||||| || || ||||| || || || ||| || ||| |||| Sbjct 58661 ACGGCTGCTGCAATTGCTTACGGTCTTGACAA---GAAGGATGGAGAGAAGAAT-GTCTT 58716 Query 349775 A-TTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAAT 349833 | | || ||| | ||||||||||||||||| || || | || |||| | || | Sbjct 58717 AGTATTCGATCTGGGTGGTGGTACTTTTGACGTCAGTCTCTTGACTATTGACAACGGTGT 58776 Query 349834 TTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 || |||||| | || ||||| || ||| | || || ||||| ||||| Sbjct 58777 GTTCGAAGTTGTGTCTACAAACGGTGACACCCATTTGGGAGGTGAAGACTTTGA 58830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515166589586969