Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10] 4,523 sequences; 239,677,193 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq3919 87.8 2e-12 >seq3919 Length=163912 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 59991 GCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTC 60050 || |||||| || ||||| ||||||||| ||| ||| | || ||||||||| Sbjct 142333 GCCTTTGCAGCAGTCGAAGGGATCTTCTTCAGTGGAAGTTTCGCCTCCATATTCTGGCTC 142274 Query 60051 AAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAG 60110 ||||||||||| | ||||| || |||| ||| ||||||||| |||||| |||||||| Sbjct 142273 AAAAAGCGTGGATTGATGCCAGGTCTGACCTTCAGCAACGAGCTCATTTCCAGGGACGAG 142214 Query 60111 G 60111 | Sbjct 142213 G 142213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548493787779120