Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10]
4,523 sequences; 239,677,193 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq4170 91.5 2e-13
>seq4170
Length=99706
Score = 91.5 bits (100), Expect = 2e-13
Identities = 185/272 (68%), Gaps = 12/272 (4%)
Strand=Plus/Minus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
||||| || || || | || || | || || ||||| |||| || |||||||||
Sbjct 60084 GTGAAAATATAACGAGGACTAGCAGAGTCTTTTCCACCAATGAGCCTGGTACCAAACTGT 60025
Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148
||| ||| | ||| | ||||| |||||| || |||||||| || |||||||| | |
Sbjct 60024 CCAATGGGTTGGAGTAAGTTGATATTGTTGCTACCGACGAAATTTTGGGCCAAATTAATA 59965
Query 152149 ATCGT-GCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCC 152207
|| || ||| || || ||||||||||| || || || | ||||| || | | ||
Sbjct 59964 ATAGTAGCCATG-AGGGAAGCTTCACCGTGATGGTATGCAGATTGCTCGGCAACTGAACC 59906
Query 152208 CGCCAACTGCGCCAC-----CTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAA 152262
|||| ||||| || ||||| || |||| | || || | ||| | ||||
Sbjct 59905 AGCCAGTTGCGCTACTTTAACTTCACGTTTATCGTTACGT-----TTCAAACATGTGTAA 59851
Query 152263 ATCACCTTGCGCTGGGATGGTTTCAAACCGTC 152294
|| ||||| | ||| ||||| ||||||||
Sbjct 59850 ATGACCTTTCTCTGACCAGGTTTAAAACCGTC 59819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547185061775400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |