Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10] 4,523 sequences; 239,677,193 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq3919 105 6e-18 >seq3919 Length=163912 Score = 105 bits (116), Expect = 6e-18 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 4818 ATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGA 4877 || ||||||||||| || || ||||| || ||||| | |||||| || || || ||| Sbjct 143227 ATGTAAGTGTCTATGAGCAGCGAGTACATCTCTGAATGAACATTTTCCATGGCTATTTGA 143286 Query 4878 AATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAG 4937 || ||||||||||| || ||||||||||| ||||| | | || | || |||| Sbjct 143287 AAGCCGTAAAAGCACCTGGCTTCTGTTACAGTCACTTCTTGGCTGAAACGCTCGACTAGA 143346 Query 4938 TTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAA 4993 |||||||| || || || || || || ||||| |||| ||||||||||| || Sbjct 143347 TTTTCGTTGACGATTCCATCCGATGCCGCGAAAAATGCCAGGACATGAGATATGAA 143402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427026059291159