Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10]
4,523 sequences; 239,677,193 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq3112 89.7 4e-13
>seq3112
Length=543522
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 27211 CCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACC 27270
|| ||||| || |||| ||| || ||||| ||||| || ||||| ||||||||||| |
Sbjct 484203 CCTGTGACATGGGCCAACATATAAGTGAGTAGAGAATAACTGGCAATGTTAAAGGGAATA 484262
Query 27271 CCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACG 27330
|| || ||||| ||||| || |||||| | |||||| | || |||| |||
Sbjct 484263 CCCAGACCCATATCCCCGCTCCGCTGGTACAATAAACACGATAATTCGCCATTAGACACG 484322
Query 27331 TAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTC 27390
|| |||||| | ||||| || || | |||||| | | || || |||
Sbjct 484323 TACAACTGAACCAGACAATGGCAAGGTGGTAAAGCCATTATTGGGATATCCACTGGATTC 484382
Query 27391 CAGGCGCACACGATGATGCGCCTGTCTTCTGG 27422
||||| |||| ||||| |||||||| |||||
Sbjct 484383 CAGGCACACATTATGATTCGCCTGTCATCTGG 484414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369486831262013
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |