Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10] 4,523 sequences; 239,677,193 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq3112 89.7 4e-13 >seq3112 Length=543522 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 27211 CCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACC 27270 || ||||| || |||| ||| || ||||| ||||| || ||||| ||||||||||| | Sbjct 484203 CCTGTGACATGGGCCAACATATAAGTGAGTAGAGAATAACTGGCAATGTTAAAGGGAATA 484262 Query 27271 CCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACG 27330 || || ||||| ||||| || |||||| | |||||| | || |||| ||| Sbjct 484263 CCCAGACCCATATCCCCGCTCCGCTGGTACAATAAACACGATAATTCGCCATTAGACACG 484322 Query 27331 TAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTC 27390 || |||||| | ||||| || || | |||||| | | || || ||| Sbjct 484323 TACAACTGAACCAGACAATGGCAAGGTGGTAAAGCCATTATTGGGATATCCACTGGATTC 484382 Query 27391 CAGGCGCACACGATGATGCGCCTGTCTTCTGG 27422 ||||| |||| ||||| |||||||| ||||| Sbjct 484383 CAGGCACACATTATGATTCGCCTGTCATCTGG 484414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369486831262013