Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10] 4,523 sequences; 239,677,193 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq3919 93.3 4e-14 >seq3919 Length=163912 Score = 93.3 bits (102), Expect = 4e-14 Identities = 112/146 (77%), Gaps = 10/146 (7%) Strand=Plus/Plus Query 23157 TTTTTAAAAATCTTCATCTAAAGTGAATTTCACT---GCT-TTATCACTATTCATAACAC 23212 ||||||||||||| |||||| ||||| ||||| | | || || | |||| || | Sbjct 141415 TTTTTAAAAATCTGCATCTATTGTGAA-CTCACTCTCGTTCTTTTCTC---TCATCACGC 141470 Query 23213 CCATTTTTTGATATTCCCCAACACGTCTT-TCGAAAAAATTTGTCTTACCCTCTAATGAT 23271 || |||||| ||||| || || | |||| ||||| ||||| |||||||| |||| ||| Sbjct 141471 CCCATTTTTGGTATTCTCCGAC-CTTCTTCTCGAAGAAATTAGTCTTACCTTCTAGCGAT 141529 Query 23272 ATATTTTCCATAAAATCAAATGGATT 23297 || |||||||| ||||| || ||||| Sbjct 141530 ATGTTTTCCATGAAATCGAACGGATT 141555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521458516372200