Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_001604.1 Length=39937 Score E Sequences producing significant alignments: (Bits) Value seq34826 105 2e-18 >seq34826 Length=13225 Score = 105 bits (116), Expect = 2e-18 Identities = 183/266 (69%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 32773 GTAGAGAAGTACGCTATGGATAAGGCTTATGGTATCTCCCACTCAGACCAGTTCACCAAC 32832 || ||||||||||| | || ||||| ||||| ||| |||||| |||| ||||| Sbjct 5920 GTCGAGAAGTACGCCAACGACAAGGCGTATGGCATCAGCCACTCCGACCGCTTCACGGCT 5861 Query 32833 AGTTCCATAATAGAAGAGAACATTGAGGGCTTAGTAGGTATCGAGAATAACTCATTCCTT 32892 || | |||| ||| || | ||| | | ||| | ||||| ||| | ||| Sbjct 5860 GACTCGCTGGTAGAGGAGCACCTGAAGGACGGGGCAGGCCTGGAGAACAACGACTACCTC 5801 Query 32893 GAGGCACGTAACTTGTTTGATTCGGACCTATCCATCACTATGCCAGACGGACAGCAATTC 32952 || || |||||| | || || || || | || ||||| ||| ||||| |||| ||| Sbjct 5800 GAAGCTCGTAACCTCTTCGACTCCGATATGTCGATCACCGCGCCTGACGGCCAGCCGTTC 5741 Query 32953 TCAGTGAATGACCTAAGGGACTTCGATATGTTCCGCATCATGCCAGCGTATGACCGCCGT 33012 | ||||||||||| | |||||| | || | || | | || ||| |||||| | Sbjct 5740 GCTGTGAATGACCTCCGAGACTTCAACCTGCTTCGGGTGGTCCCGCAGTACGACCGCAGG 5681 Query 33013 GTCAATGGTGACATCGCCATCATGGG 33038 ||||| |||||||||||| ||||||| Sbjct 5680 GTCAACGGTGACATCGCCCTCATGGG 5655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127403533025768