Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq6372 156 5e-33 seq26 84.2 3e-11 >seq6372 Length=86001 Score = 156 bits (172), Expect = 5e-33 Identities = 166/218 (76%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 |||||| || || |||| ||||| || || || ||||| |||||||||| ||| Sbjct 39262 GATGAACTCGCCCGGCTGCAGGCCGCAGACCTGCGCCACCATCAGCGTCAGCAGGGCGTA 39321 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 |||||| |||||||||||||| || || |||||| ||||||||||||| |||||||| Sbjct 39322 GCTGGCGATGTTGAAGGGCACGCCGAGGAAGATGTCCGCCGAGCGCTGGTAGAGCTGGCA 39381 Query 145851 GGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 ||| |||| ||| | || |||||||||||| |||| || ||||||||||| ||||| Sbjct 39382 GGACAGCTTGCCGTCGGCGACGTAGAACTGGAACAGCGCATGACAGGGCGGCAGCGCCAT 39441 Query 145911 ---GGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGA 145945 || ||| ||||||||||||||| | || || Sbjct 39442 CTGCTCGACCAG---CGCCGGGTTCCAGGCCGAGACGA 39476 >seq26 Length=549101 Score = 84.2 bits (92), Expect = 3e-11 Identities = 72/87 (83%), Gaps = 4/87 (5%) Strand=Plus/Minus Query 145867 GCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCG--GGCAGGTCCG 145924 ||||||||||||||| ||||| ||||||||||||||| |||||| || | | || | Sbjct 240558 GCCACGTAGAACTGGAACAGGGCGTGGCAGGGCGGCAGCGCCATGTCGTCGACCAGT--G 240501 Query 145925 CCGGGTTCCAGGCGGTGAGGACGAGCC 145951 |||||||||||||| ||| || ||||| Sbjct 240500 CCGGGTTCCAGGCGCTGACGATGAGCC 240474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588747386473440