Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= NC_001884.1
Length=134416
Score E
Sequences producing significant alignments: (Bits) Value
seq1499 105 6e-18
>seq1499
Length=182485
Score = 105 bits (116), Expect = 6e-18
Identities = 170/242 (70%), Gaps = 2/242 (1%)
Strand=Plus/Minus
Query 121818 CAGGAGCAGTTTATCTAAGTGTATTCCATCCAGACATTACAGACTTCCTGGATACCaaaa 121877
||||||| || ||| | | | | ||||| | |||||| ||| ||| ||||| || |
Sbjct 107709 CAGGAGCTGTCTATTTGAATATCTTCCACTCGGACATTGAAGAATTCTTGGATTGTAAGA 107650
Query 121878 aaaTAAGTGCTGATGAAGATGTCCGAGTTAAAACACTGTCTATTGGCGTAGTTGTTCCAG 121937
|||| | || ||||| | || || | || | | ||||| || | | ||||| |
Sbjct 107649 AAATCAATGTGGATGAGAAAGTACGTATCAAGTCCTTATCTATCGGTATCATCGTTCCGG 107590
Query 121938 ACAAATTTATTGAATTGGCAAGGGAAGACAAGGATTATTACATGTTCTATCCGCATTCAG 121997
| ||||| || ||||||||| | |||| || || ||| || ||||||||||| | |
Sbjct 107589 ATAAATTCATGGAATTGGCAGAGAAAGATGAGCCTTGTTATTTGATCTATCCGCATACGG 107530
Query 121998 T-ATACAAGGAGTATGGGCAGTATCTAGATGAGCTAGACATTAATGAAATGTATGATGAG 122056
| || || ||||||||| ||||| || |||||| | || || | | |||||||||||
Sbjct 107529 TTATGCA-GGAGTATGGTCAGTACCTGGATGAGTTGGATATGGACGTGATGTATGATGAA 107471
Query 122057 CT 122058
||
Sbjct 107470 CT 107469
Score = 93.3 bits (102), Expect = 4e-14
Identities = 189/278 (68%), Gaps = 7/278 (3%)
Strand=Plus/Minus
Query 126166 CTTACTGCAGGAACTTTACGAAAATGAATTGGAGTATACAGAAGA--TGTCTATGATCAG 126223
|||| || | || ||||| |||||||| | | || || ||||| ||| || | | |
Sbjct 105604 CTTATTGAACGATCTTTATGAAAATGAGATCAAATACACCGAAGAATTGTATACGGT--G 105547
Query 126224 GTTGGATTAGCTCCAGATGTAAAGAAATTCATCAGATACAACGCAAATAAAGCTTTAAAC 126283
|| || ||| | | || |||||| ||| | | | ||||| | |||||||| || |
Sbjct 105546 GTAGGTTTAACAGCTGAGGTAAAGGAATACGTTCGCTACAATGGTAATAAAGCCTTGATG 105487
Query 126284 AATCTGGGCTTTGATCATTGGTTTGAAGAAGAGGATGTTAATCCAATTGTTATCAATGGT 126343
|| | || ||||||| | ||||||| | || | || ||||| |||||| | || |||
Sbjct 105486 AACTTAGGGTTTGATCCTATTTTTGAAGTAAAGCAGGTCAATCCGATTGTTTTGAACGGT 105427
Query 126344 TTGAACACTAAGACTAAATCCCATGACTTCTTTTCAACTAAAGGGAATGGATACAAAAAA 126403
|||||||| |||| | | || || ||||| || | ||| || ||| |||||
Sbjct 105426 TTGAACACCGAGACGACACAACACGATTTCTTCTCGAAGAAATCGACGAACTACGAAAAA 105367
Query 126404 GCAAC---AGTGGAGCCTTTAAAGGATTCAGATTTCAT 126438
||||| | | | || ||| ||| || ||||||||
Sbjct 105366 GCAACCGAAATCGTGCATTTGAAGAATGAGGATTTCAT 105329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429061836654092
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |