Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_001901.1 Length=46375 Score E Sequences producing significant alignments: (Bits) Value seq22220 96.9 1e-15 >seq22220 Length=23789 Score = 96.9 bits (106), Expect = 1e-15 Identities = 367/571 (64%), Gaps = 4/571 (1%) Strand=Plus/Plus Query 645 CCCATGACAGCTGTCGAATGGGCCGATGCGCATTATTACCTTCCGAAAGAATCCGCTTAT 704 || ||||| || ||||| ||||| || ||||| ||| | || || ||| | || Sbjct 22994 CCGATGACGGCGGTCGAGTGGGCGGACAAGCATTTCTACATGTCGGCCGAGTCCTCGTAC 23053 Query 705 CAGGAGGGTCGCTGGGAAACACTGCCATTTCAGCGCGCGATCATGAATGCGATGGGCAGT 764 | ||||| ||| | || || |||||| |||||| | || |||||||||| | Sbjct 23054 AACGAGGGCAAGTGGCAGACGGCACCGTTTCAGGTGGCGATCCTCAACGCGATGGGCAAT 23113 Query 765 GACTATATTCGCATTGTTAACGTCATTAAGTCGGCGCGAGTAGGCTATTCGAAAATGCTC 824 ||| || | || ||| || | ||||||||||| | || || | || |||| Sbjct 23114 GACCTGATCAAGGTCGTCAACTTCGTGAAGTCGGCGCGGATCGGATACACCAAGCTGCTG 23173 Query 825 CTCGGCG-TCATTGCTTATTTCATCGAGCACAAACAGCGTAATGAGTTGCTGTGGCTGCC 883 | |||| ||| | || | ||||||||| || || | || ||||| ||| Sbjct 23174 AT-GGCGAACATCGGCTACAAGGTTCAGCACAAACGCCGCAACGTCATGATGTGGTCGCC 23232 Query 884 GACCGACGGCGACGCAGATAATTTCATGAAGTCACACGTTGAACCG-ACGATTCGTGATG 942 |||||| ||||| || | ||| || ||||| | ||| | | ||| ||||| | Sbjct 23233 GACCGAACCTGACGCCGAAGACATCAGCAAAAAACACG-TCAACGGCATGATCCGTGAAG 23291 Query 943 TCCCTTCTCTGTTATCACTTGCACCCTGGTACGGGAAAAAGCACAGGGACAATACCCTGT 1002 | || | || ||| | ||||||| || |||||||| ||||| || ||| Sbjct 23292 TGCCGGTGATACTAGAACTAACGCCCTGGTTTGGACGCAAGCACAGCGACAACACGCTGG 23351 Query 1003 CGATGAAGCGTTTTACCAATGGCCGTGGATTTTGGTGCCTGGGCGGTAAGGCTGCAAAAA 1062 | ||| ||| |||| |||| | ||| | ||||| || || | | Sbjct 23352 ACAACAAGGTTTTCGCCAACCGCCGCAACCTGTGGATTCGCGGCGGAAAAGCCTCGCGCA 23411 Query 1063 ACTATCGTGAAAAATCAGTAGATGTAGTTGGTTACGATGAACTGGCGGCGTTTGACGCAG 1122 ||||||| || ||||| | || | |||| || || || || || ||| || || | Sbjct 23412 ACTATCGCGAGAAATCCGCTGACGAAGTTATCTATGACGAGCTCTCGAAGTTCGATGCTG 23471 Query 1123 ACATTGAGAAAGAGGGTTCGCCGACCTTCCTGGGGGATAAGCGTATCGAGGGCTCTGTTT 1182 |||| ||| ||||| |||||||| |||||||| || ||||| | || || | || | Sbjct 23472 ACATCGAGGGCGAGGGCTCGCCGACTTTCCTGGGCGACAAGCGCCTTGATGGTGCCGTCT 23531 Query 1183 GGCCCAAATCCATACGCGGTTCGACACCGAA 1213 || || ||||| ||||| || || ||||| Sbjct 23532 ACCCGAAGTCCATCCGCGGCTCAACGCCGAA 23562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147961039369784