Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq14733 111 1e-19 seq10826 86.0 4e-12 >seq14733 Length=41167 Score = 111 bits (122), Expect = 1e-19 Identities = 115/151 (76%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 97035 CTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAAT 97094 ||| ||| | |||||||| || || | | ||| |||||||||||||| | || |||| Sbjct 24460 CTGTTCTTTAAGAGCATCTATATGGTCAAGATATATGTGAGCATCTCCAACGGTATGAAC 24401 Query 97095 AAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCT 97154 ||| ||||||| | ||||||||| | || |||||| |||||| |||| |||||| Sbjct 24400 AAAATCTCCAGTTTTGAGATCAGTGACTTTTGCAATCATATGAGTTAAAAGAGCATAGCT 24341 Query 97155 AGCAATGTTAAAAGGCACCCCTAGTCCCATA 97185 ||| |||||||| || || ||||| ||| || Sbjct 24340 AGCTATGTTAAATGGTACACCTAGACCCTTA 24310 >seq10826 Length=56349 Score = 86.0 bits (94), Expect = 4e-12 Identities = 123/168 (73%), Gaps = 4/168 (2%) Strand=Plus/Minus Query 97290 ATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTA-TGGTATTAATTA 97348 ||||||||| |||| | |||||||||||| ||| ||| | | || | || |||| Sbjct 56055 ATTCCAAGCGGACATTATCATTCTTCTATCATATGG-TTTCTCTTTAATAAGGTTTATTA 55997 Query 97349 TCTGCTTTAATTGATCAACGCCTTCTCCACCATAAT-TGTGCTTAAGACCTTGATATTCT 97407 | | || | |||||||| ||||| ||| ||||| | | || | | | || ||| | Sbjct 55996 TATACTGCAGCTGATCAACTCCTTCGCCAGTATAATCTTTACTCATGTCAGTGTAATT-T 55938 Query 97408 GCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCT 97455 || |||||||| | |||||| || ||||||||||| ||||| |||||| Sbjct 55937 GCACCAAAATGTCGCCATTGAAACCCATAAACAGGACCAAGATCTCCT 55890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346022245162520