Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq2234 149 9e-31 seq32926 95.1 2e-14 seq10826 84.2 3e-11 >seq2234 Length=154088 Score = 149 bits (164), Expect = 9e-31 Identities = 163/214 (76%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| ||||||| |||||||| ||||| || || |||| | ||| ||| | Sbjct 11878 ATGCAAATTTTTGTAAAGACTCTAACAGGTAAAACAATTACATTAGAAGTCGAACCAAGT 11937 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| ||||| || ||||| || || |||||||| || || || ||||| Sbjct 11938 GATACCATTGAAAATGTTAAAGCA-AAAATCCAGGACAAAGAAGGAATTCCCCCAGATCA 11996 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || | | |||||||| || || ||| |||| ||| | || || | |||||||| Sbjct 11997 GCAGCGTTTAATTTTTGCTGGTAAGCAACTAGAAGATGGCCGTACTCTGTCGGATTATAA 12056 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTA 124751 |||||||||||||| ||| ||||| |||||||| Sbjct 12057 CATTCAAAAAGAATCTACTCTGCATCTGGTTTTA 12090 Score = 140 bits (154), Expect = 5e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || || || |||||||| || || |||| ||||| | | | Sbjct 12646 ATGCAAATTTTTGTTAAAACCCTGACTGGCAAAACCATCACCTTAGAAGTTGAACCTAGT 12705 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||||||| ||| | ||| ||||| || |||||||||||||| || || ||||| Sbjct 12706 GATACAATTGAGAATGTGAAAGCCAAAATCCAGGATAAAGAAGGTATTCCCCCAGATCAG 12765 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||| | || ||||| || |||||| | || ||| | |||| || |||||||||| Sbjct 12766 CAGAGGTTAATCTTTGCTGGTAAACAACTTGAAGATGGCAGAACTTTGTCAGATTATAAT 12825 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTT 124748 || || || ||||| ||| | || |||||| Sbjct 12826 ATCCAGAAGGAATCTACTCTACACTTGGTT 12855 Score = 134 bits (148), Expect = 2e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 124565 AGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAATTTAAAACAGAA 124624 ||| ||||| || ||| | || ||||| ||| |||||| ||| ||| | ||| || Sbjct 12444 AGGTAAAACCATTACTCTTGAAGTTGAACCAAGTGATACCATTGAGAATGTGAAAGCTAA 12503 Query 124625 AATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACA 124684 ||||||||||||||||||||| || || ||||| || ||| | || || ||||| ||||| Sbjct 12504 AATTCAAGATAAAGAAGGTATTCCTCCAGATCAGCAGAGGTTAATCTTCGCAGGTAAACA 12563 Query 124685 ATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTT 124744 | | || ||| | ||||| || || ||||| ||||| |||||||||||| ||||| | Sbjct 12564 ACTTGAAGATGGCCGAACCCTATCGGACTATAACATTCAGAAAGAATCAACTCTGCATCT 12623 Query 124745 GGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 || || | | ||||| || || ||| || Sbjct 12624 AGTCTTGAGGCTCCGAGGAGGCATGCAAATTT 12655 Score = 131 bits (144), Expect = 3e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || || || || || || || || |||| | ||| ||| Sbjct 12106 ATGCAAATTTTTGTTAAAACCCTCACTGGAAAGACCATCACCTTAGAAGTAGAACCAAGC 12165 Query 124599 GATACAATTTCTAATTT-AAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||||||| ||| | |||||| |||||||||||||||||||| || ||||| ||||| Sbjct 12166 GATACAATTGAAAATGTCAAAACA-AAAATTCAAGATAAAGAAGGCATTCCACCAGATCA 12224 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||||| |||||||| || ||||| | || ||| | || || | ||||| || Sbjct 12225 GCAAAGGCTGATTTTTGCTGGTAAACAGCTTGAAGATGGGCGTACCCTGTCGGATTACAA 12284 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || |||||||| || || | ||| | ||| | | ||| |||| || || Sbjct 12285 CATCCAAAAAGAGTCTACACTCCATCTAGTTCTCAGATTAAGAGGAGGGAT 12335 Score = 127 bits (140), Expect = 3e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || ||||| |||||||| || || | || | || | | | Sbjct 11422 ATGCAAATTTTCGTGAAAACCCTAACTGGCAAAACCATCACCTTGGAAGTAGAGCCTAGT 11481 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || ||||| || | ||| ||||||||||| ||||||||||| || || |||||| Sbjct 11482 GACACAATAGAAAACGTCAAAGCCAAAATTCAAGACAAAGAAGGTATCCCCCCAGATCAA 11541 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||||| |||||||| || || || || || ||| |||| || | ||||| || Sbjct 11542 CAGAGGCTAATTTTTGCTGGTAAGCAGTTGGAAGATGGTCGTACTCTTTCTGATTACAAC 11601 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||||||||| || || ||||| ||| | | || |||| ||||| Sbjct 11602 ATCCAAAAAGAATCTACATTACATTTAGTTCTGAGGTTGAGAGGAGGTAT 11651 Score = 123 bits (136), Expect = 4e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||||||||| ||||||| || ||||| || || ||||| |||| ||||| | | Sbjct 10965 AATGCAAATATTCGTAAAGACTCTGACAGGGAAGACCATAACGTTAGAAGTTGAACCTAG 11024 Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 || ||||| ||| | |||||| ||||| || ||||||||||| || || || || | Sbjct 11025 CGACACAATAGAAAATGTCAAAACA-AAAATCCAGGATAAAGAAGGCATCCCTCCAGACC 11083 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | || || | || || || |||||||| | || ||| |||| || | ||||| | Sbjct 11084 AGCAGAGATTGATCTTCGCCGGAAAACAGCTTGAAGATGGTCGTACTCTGTCTGATTACA 11143 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||| || |||||||| ||| | || |||||| | || | |||| ||||| Sbjct 11144 ATATCCAGAAAGAATCCACTCTTCACTTGGTTCTGCGACTTAGAGGAGGTAT 11195 Score = 118 bits (130), Expect = 2e-21 Identities = 174/245 (71%), Gaps = 1/245 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || || ||||| || ||| | || | || | | | Sbjct 10738 ATGCAGATCTTTGTGAAGACTCTGACTGGAAAAACCATCACTCTTGAAGTGGAGCCTAGT 10797 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || ||||| ||| | || || |||||||||||||| ||||| ||||| ||||| Sbjct 10798 GACACAATCGAAAATGTGAAGGCCAAGATTCAAGATAAAGAGGGTATCCCACCAGATCAG 10857 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||||| || ||||| ||||| || | || ||| | || || | |||||| ||| Sbjct 10858 CAGAGGCTGATCTTTGCTGGAAAGCAGCTTGAAGATGGCCGTACTCTTTCAGATTACAAT 10917 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTC 124777 || ||||||||||| ||| | || ||||| | || | |||| || || ||| |||| Sbjct 10918 ATCCAAAAAGAATCCACTCTTCACCTGGTTCTCCGACTGAGAGGAGGAATGCAAATATTC 10977 Query 124778 ATAAA 124782 |||| Sbjct 10978 GTAAA 10982 Score = 114 bits (126), Expect = 2e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | || || || || ||||| || || ||| ||||| |||| | | Sbjct 10509 AATGCAGATTTTTGTGAAAACTCTCACCGGCAAGACCATCACTCTAGAGGTTGAGCCTAG 10568 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| |||| || ||||| || |||||||| || || || ||||| Sbjct 10569 TGATACCATTGAAAATGTAAAGGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCA 10628 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | || ||||| ||||||||||| || ||| | |||| | || || || Sbjct 10629 ACAACGATTGATCTTTGCTGGAAAACAATTGGAAGATGGAAGAACCCTCTCGGACTACAA 10688 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||| ||||| || | ||| | ||| | | | |||||||||| Sbjct 10689 CATTCAAAAGGAATCCACACTTCATCTAGTTCTCAGGCTCAGAGGTGGTAT 10739 Score = 114 bits (126), Expect = 2e-20 Identities = 168/238 (71%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || || || || || || || || |||| |||| ||| | Sbjct 11650 ATGCAAATCTTCGTCAAAACTCTTACTGGGAAGACAATTACACTAGAAGTTGAGCCAAGT 11709 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||||||| ||| | ||| |||||||||||||| |||||||| || ||||||||| Sbjct 11710 GATACAATTGAAAATGTCAAAGCTAAAATTCAAGATAAGGAAGGTATCCCTCCTGATCAA 11769 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || ||||| || || || |||| ||| | || || | || || || Sbjct 11770 CAACGATTAATCTTTGCGGGCAAGCAGCTAGAAGATGGACGTACTCTGTCGGACTACAAC 11829 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 || ||||| |||||||| | || ||||| || | || |||| || || ||| || Sbjct 11830 ATCCAAAAGGAATCAACCCTTCACTTGGTCTTGAGACTAAGAGGAGGCATGCAAATTT 11887 Score = 113 bits (124), Expect = 7e-20 Identities = 172/240 (72%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | || || | ||||| || || ||||| |||| | |||| | | Sbjct 11194 ATGCAAATATTTGTCAAAACTTTGACAGGGAAGACCATAACCTTAGAAAGTGAACCTAGC 11253 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || ||||| ||| | || ||| ||||| ||||||||||||||||| || || || || Sbjct 11254 GACACAATAGAAAATGTCAAGACA-AAAATCCAAGATAAAGAAGGTATTCCCCCAGACCA 11312 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | | |||||||| || || ||| |||| ||| | || || || || || || Sbjct 11313 ACAGCGTTTGATTTTTGCTGGTAAGCAACTAGAAGATGGCCGTACTCTATCGGACTACAA 11372 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGT-TTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||| |||||||| ||| | ||| | || || | | ||| |||| || || ||| || Sbjct 11373 CATTCAGAAAGAATCTACTCTACATCTAGTCTTGAGGCTTA-GAGGAGGCATGCAAATTT 11431 Score = 96.9 bits (106), Expect = 5e-15 Identities = 135/187 (72%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 124565 AGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAAT-TTAAAACAGA 124623 ||| ||||| || || |||| | || | | |||||| ||| || ||||| || | Sbjct 13264 AGGAAAAACAATTACACTAGAAGTCGAGCCCAGTGATACTATTGAAAACGTTAAAGCA-A 13322 Query 124624 AAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAAC 124683 | || ||||| || ||||| |||||||| ||||||||| | || || ||||| || |||| Sbjct 13323 AGATCCAAGACAAGGAAGGAATACCACCAGATCAACAACGTCTCATCTTTGCTGGTAAAC 13382 Query 124684 AATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATT 124743 | || || ||| | |||| | || ||||||||||| || || || ||| | || | Sbjct 13383 AGTTGGAAGATGGAAGAACCCTGTCTGACTATAATATTCAGAAGGAGTCTACTCTACACT 13442 Query 124744 TGGTTTT 124750 ||||||| Sbjct 13443 TGGTTTT 13449 >seq32926 Length=14205 Score = 95.1 bits (104), Expect = 2e-14 Identities = 150/213 (70%), Gaps = 9/213 (4%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| ||||| | || || |||||||| ||||| || || |||| | || | | | Sbjct 14113 ATGCAGATATTCGTCAAAACTCTAACAGGAAAAACAATTACACTAGAAGTCGAGCCCAGT 14054 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| | ||| || ||||| || || || ||||| || ||||| |||||||| ||||| Sbjct 14053 GATGCTATTGAAAACGTTAAAGCA-AAGATCCAAGACAAGGAAGGAATACCACCAGATCA 13995 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | || |||||||| || || || ||| | |||| | || ||||| Sbjct 13994 ACAACGTCTCATTTTTGCTGG-------TTGGAAGATGGAAGAACCCTGTCTGACTATAA 13942 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTT 124750 |||||| || || || ||| | || |||||||| Sbjct 13941 TATTCAGAAGGAGTCTACTGTACACTTGGTTTT 13909 >seq10826 Length=56349 Score = 84.2 bits (92), Expect = 3e-11 Identities = 120/169 (71%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 205617 AGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttatttat 205676 ||||||||| || | | ||| || ||||| | ||||| | ||| || ||||| Sbjct 56058 AGGATTCCAAGCGGACATTATCATTCTTCTATCATATGGTTTCTCTTTAATAAGGTTTAT 55999 Query 205677 AATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATTT 205736 |||| | ||||||| ||||| ||||||| | || ||| ||| | || || Sbjct 55998 TATATACTGCAGCTGATCAACTCCTTCGCCAGTATAATCTTTACTCATGTCAGTGTAATT 55939 Query 205737 AGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCT 205785 ||||||||||| ||||||||||| |||||||| ||||| | ||| ||| Sbjct 55938 TGCACCAAAATGTCGCCATTGAAACCCATAAACAGGACCAAGATCTCCT 55890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 753753995404800