Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq23155 174 3e-38 >seq23155 Length=22375 Score = 174 bits (192), Expect = 3e-38 Identities = 250/350 (71%), Gaps = 2/350 (1%) Strand=Plus/Minus Query 135592 ATTTATACAGATAAAGACGAGTGGACTACGTGGaaaaaaaTACCCGATCCTGTTTTGCAT 135651 || ||| | ||| |||| || ||| || ||||| | || | ||||| ||||| || Sbjct 9476 ATATATTCCGATGAAGATGAATGGTCTTGCTGGAAGGAGATGTCTGATCCCGTTTTACAC 9417 Query 135652 ATAGAACTTAGGAGATGGGCGGATGTTTTTATTATAGCGCC-CTTAACGGCAAATACGTT 135710 || | | | | ||||| |||| || || || || || ||| | | ||| ||| || Sbjct 9416 ATCCAGTTACGTCGCTGGGCTGATGCGTTAATCATTGCACCTCTTGATGCCAA-TACATT 9358 Query 135711 AGCAAAAATAGCTAATGGTATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGA 135770 ||| ||||| || ||||||||||| || ||| ||||||| | | | | |||||||| Sbjct 9357 AGCCAAAATGGCAAATGGTATATGTGACAATCTACTGACATGCACAATTCGGGCCTGGGA 9298 Query 135771 TACAAACAAACCACTCATTTTCTGTCCTGCAATGAATACTCTTATGTGGGAACATCCTAT 135830 || || |||||| | |||||||||| || |||||||| ||||||||| ||||| | Sbjct 9297 TAGAATGAAACCATTATTTTTCTGTCCAGCTATGAATACATATATGTGGGATCATCCATT 9238 Query 135831 TACAGAAAAACATATAGATACGTTAAAATATATGGGTTTCATAGAAATAGAATGCATAGa 135890 |||| ||| ||| | | || || || |||| | ||| ||||| ||| | | Sbjct 9237 GACAGCAAAGCATGTGAAGGAATTGAAGGATTTGGGATACATTGAAATTCCATGTGTGGC 9178 Query 135891 aaaaaaaCTAGCATGTGGAGACGTAGGAAATGGTGCTATGGCAGAAGTTG 135940 ||||| | ||||||||||||| ||||| ||||||||||||| ||||||| Sbjct 9177 AAAAAGATTAGCATGTGGAGATGTAGGTCATGGTGCTATGGCTGAAGTTG 9128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921116883769440