Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq4663 241 1e-58 seq18050 212 6e-50 seq38288 201 1e-46 seq77092 136 4e-27 seq5663 109 5e-19 seq84794 86.0 6e-12 seq27548 86.0 6e-12 >seq4663 Length=104512 Score = 241 bits (266), Expect = 1e-58 Identities = 586/874 (67%), Gaps = 28/874 (3%) Strand=Plus/Plus Query 13929 CTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAATG 13988 |||| | |||||||||||||| |||||| | | |||||||||||||||||||| || | Sbjct 34247 CTCTCCTATCAAAGAAGTTAGTCTTACCTACTAAAGATATATTTTCCATAAAATCGAAAG 34306 Query 13989 GATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATA-GTAATCTATCCGCAATG 14047 | || | || || | ||| || | || | | ||||| | ||||| || || || Sbjct 34307 GGTTGGCTGTGTTATAATATTTCTCCAATCCCAAAT-TAATAAGCAATCTGTCAGCCATA 34365 Query 14048 AACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAA---TT 14104 || |||||||| | | ||||||| | ||||||||| |||| || ||||| || | || Sbjct 34366 AATTCAATATACTCACACATTAATTTACAATTCATTTCTATAAGATTTACTGGTAAGCTT 34425 Query 14105 ATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAATT 14164 | | | |||||||| || |||||| |||| || || | ||| ||| | || Sbjct 34426 ACACT---TAAAAATTATTGTTCTATGATGACAGATTCTTTAACTATA-TCG--AGTATG 34479 Query 14165 TCATTAGAAGGAGGATATTT---TAGATGTTTAAAAATTAAACACGCAAAATCACAATGA 14221 | |||||| | || || || ||| || ||| ||||||||||| ||| Sbjct 34480 T------AAGGAGACTTGTTAATTAAATATTTGTTAAGGTGACATGCAAAATCACAGTGA 34533 Query 14222 AGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGt 14281 || || |||||||| ||||||||||| || | || |||| | ||||||| ||| || Sbjct 34534 AGTCCTTCATCTCTGCTAATAAGTTCATTGGCGAAGGTTAGGACAGGCATCAGTCCACGA 34593 Query 14282 ttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCA 14341 || || ||||| || |||| ||| |||| || |||||||||||||| || || |||| Sbjct 34594 TTCTTCAACCAGAAGATTGAAGCAAATGCACCCGAAAAGAATATTCCTTCTACACAAGCA 34653 Query 14342 AACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCAT 14401 || |||| || || ||| | | || || ||||||||| |||||| Sbjct 34654 AATGCTACTACACGAGTGGTAAATTA-GATTCCGGGTATTGTATCCATTTCAAAGCCCAG 34712 Query 14402 TCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTCCTTCTCT 14461 |||| ||| || ||||| | ||||| |||| |||||| |||||| ||||| Sbjct 34713 TCAGCTTTCTTCTTAATGCATGGTATTGTGGTAATAACATTAAGCAAATGTGTCTTCTGA 34772 Query 14462 TTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCC 14521 | | | ||| || | ||| || |||| |||||| || | || || || || Sbjct 34773 TCCTGATCAGTAATATAAGCATCTATTAGTAGAGAATACATCTCGGTATGGATATTCTCT 34832 Query 14522 ATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT-GACCATTGTACCTCTGAGTA--A 14578 || |||| || || |||||||| ||| | |||| | | || | || || |||| | Sbjct 34833 ATTGCTACTTGGAATCCATAAAAGCATTTTGCTTTTAGTACAAT-CACTTC--AGTAATA 34889 Query 14579 AATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGC-AAAAAATGCCAATAT 14637 |||||||| | | || | |||| || || ||||| | || |||||| || | || Sbjct 34890 AATCTTTCTACAAGATCTGCATTCACAATTCCATCTGATGAAGCAAAAAAAAGCAAGGAT 34949 Query 14638 GTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTTTTTCCAATCGGCTAAATCCTTAGA 14697 |||| |||||| ||| ||| | || | || | |||||| | ||| || Sbjct 34950 GTTTGAAATAAAATATCTCTCGTTATCAGTCAGAGTAGACCAATCATGTCTATCAGCTGA 35009 Query 14698 AAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCATAT 14757 ||||| ||||| ||||||||||| || | |||| ||||||||||| |||||| Sbjct 35010 TAGATCAACTTCTTCAACTGTCCAGAATGAACTCTCAGCCTTTTTATACATCTGCCATAT 35069 Query 14758 TTCTTTATATAATATAGGAAAAACTACAAATCTT 14791 || | || |||||||| | || ||||| Sbjct 35070 ATCATGGTACCTGATAGGAAAGAGAACGTATCTT 35103 >seq18050 Length=32055 Score = 212 bits (234), Expect = 6e-50 Identities = 505/750 (67%), Gaps = 24/750 (3%) Strand=Plus/Plus Query 13889 TCTTTGTTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTA 13948 |||||||| || || || ||| || ||||| | || | ||||| ||| | || Sbjct 11552 TCTTTGTTGGACATGACTTGGCATTTCTGGTATTCCCCGACACGTTTTTAAAAACAATTG 11611 Query 13949 GTTTTACCTTCCAGTGATATATTTTCCATAAAA-TCAAATGGATTTGTTGACA-TAAACA 14006 ||||| ||||||| ||| ||||| |||| ||||| || ||| | ||| || | | Sbjct 11612 GTTTTTCCTTCCAAACTAATACATTCCAAAAAAATCAAAAGGGTTT-TCCACAATATAAA 11670 Query 14007 CTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACA 14066 ||||||||| || | ||| | | ||||| || || | || ||||||||||| | Sbjct 11671 TTTTATCACACCCCAATTCCCACAATAATCGGTCTGCCACAAATTCAATATATTGCTTTA 11730 Query 14067 TTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTT 14126 | || ||||||||| || || || ||| || | | | |||||||||||||| | Sbjct 11731 TCAATGTACAATTCATGCCAATGAGGGATACTGGTAATGCCTCGGTTAAAAATTCTTGCT 11790 Query 14127 CTATAGACACAGCCTCGTTTATAATAATCGTAATAATTTCAT---TAGAAGGAGGATATT 14183 | || | || || | |||||| | | ||||| || |||| | | || Sbjct 11791 CAATCGTTACGGCATACGATATAATTTGC---ACAATTTAATGCTTAGATGATTTGTTTT 11847 Query 14184 TTAG---ATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAA 14240 ||| ||| || || | ||| | |||||| || || || || ||||||| ||||| Sbjct 11848 TTACGTAATGATTGAACAAGTGACAGGAAAAATCGCAGTGTAGCCCTTCATCTCGACTAA 11907 Query 14241 TAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTG 14300 | | ||||| ||| ||||||| ||||| ||||| ||||| ||||||||||| || | Sbjct 11908 TCAACTCGTTGCTAAACGTTAATCAAGGCATTAATCCCCGTTTCTTTAACCAAAAAATGG 11967 Query 14301 CAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTC 14360 | || || || || || || | ||||| || || || ||||| || | | |||| | Sbjct 11968 CCGCAAAGGAACCTGAGAAAAGGATTCCTTCCACAGCGGCAAAGGCCACCAGCCGTTTTG 12027 Query 14361 CAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAA 14420 ||| || | |||| |||||| ||| | |||||| | ||||| |||| Sbjct 12028 GAAAAGACGGGTTTTG------TATCCAATTTAATGACCATTCTGCCTTTTTCTTAACGC 12081 Query 14421 AATCCATTGTTTCAATAGCATTAAATAAATGT-TCCTTCTCTTTAGTACTTGAAATGTAT 14479 | | |||||||| || ||||| || ||| | || |||| | | | || | Sbjct 12082 AGGAAAGGGTTTCAATGGCGTTAAACAA-TGTATTTTTTTCTTGATGATCTCGAACGAGG 12140 Query 14480 GTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCA 14539 || ||||| | ||||| |||||||| || || || ||||| || || |||||||| || Sbjct 12141 GTCTCAATCAACAAGCTGTACATTTCTGAATGAATATTTTCAATGGCAATCTGAAAGTCA 12200 Query 14540 TAAAAACATCTAGCTTCTGACCA-TTGTACCTCT-GAGTAAAATCTTTCGGCCAAATTTT 14597 ||||| || | ||| || || || || ||| || ||| ||| | ||| | ||||||| Sbjct 12201 TAAAAGCAACGAGCCTC-GATCACTTTTACTTCACGAGCAAAG-CGTTCCACTAAATTTT 12258 Query 14598 CATTAACTATACCATCACTAGCTGCAAAAA 14627 |||| || ||||| ||||| || ||||||| Sbjct 12259 CATTTACAATACCTTCACTGGCGGCAAAAA 12288 >seq38288 Length=11396 Score = 201 bits (222), Expect = 1e-46 Identities = 305/432 (71%), Gaps = 8/432 (2%) Strand=Plus/Plus Query 14203 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 14262 ||| |||||||| || || || || ||||||| ||| || | | ||| ||| ||||| Sbjct 7670 ACAGGCAAAATCCCAGTGTAGTCCTTCATCTCGACTCATCAACTTGTTGCTAAACGTTAA 7729 Query 14263 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAA 14322 ||| ||||| ||| | ||||| ||||||||||| || || | || || || || || || Sbjct 7730 TCCAGGCATTAATTCCCGTTTCTTTAACCAAAAAATAGCCGAAAAGGAACCTGAGAAAAA 7789 Query 14323 TATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGA 14382 ||||| || || || ||||| || | || |||| | |||| |||| |||| Sbjct 7790 GATTCCTTCCACAGCGGCAAAGGCCACCAACCGTTTTGCAAAAGATGGATTTTG------ 7843 Query 14383 TATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATT 14442 |||||| ||| |||||||| | ||||| |||| | | |||||||| || || Sbjct 7844 TATCCAATTTAATGCCCATTCTGCCTTTTTCTTAAAGCAGGAAAGGGTTTCAATGGCGTT 7903 Query 14443 AAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACAT 14502 ||| || | | || |||| | | | ||||| | ||||| || ||||| ||||| Sbjct 7904 AAACAATTTATTTTTTTCTTGATGATCTCAAATGAGGATCTCAATCAGCAAGCTGTACAT 7963 Query 14503 TTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCA 14562 ||| || ||||| ||||| || || |||||||| |||||||| || | | |||| | | Sbjct 7964 TTCTGAATGTATATTTTCAATGGCAATCTGAAAGCCATAAAAGCAACGAACTTCGGTCAC 8023 Query 14563 TTGTACCTCT-GAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTG 14621 || || || ||| || | ||| | ||||||||| | || ||||||||||| || | Sbjct 8024 TTTGACTTCGCGAGCGAAG-CGTTCCACTAAATTTTCAATTACAATACCATCACTGGCGG 8082 Query 14622 CAAAAAATGCCA 14633 ||||||| |||| Sbjct 8083 CAAAAAAGGCCA 8094 >seq77092 Length=4929 Score = 136 bits (150), Expect = 4e-27 Identities = 175/242 (72%), Gaps = 6/242 (2%) Strand=Plus/Minus Query 14207 GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCT 14266 ||||||||||| || || || ||||||| |||||| | |||||| ||| |||||||| Sbjct 275 GCAAAATCACAGTGTAGTCCTTCATCTCGACTAATCAATTCGTTGCTAAACGTTAATCCA 216 Query 14267 GGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATT 14326 ||||| ||||| ||||| ||||||| ||| || || || || | | || || || ||| Sbjct 215 GGCATTAATCCCCGTTTCTTTAACCGAAAAATGGCCGCAAAGCAACATGAGAAAAAGATT 156 Query 14327 CCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATC 14386 || || || || ||||| || | |||||| | |||| |||| |||| |||| Sbjct 155 CCTTCCACAGCGGCAAAGGCCACCTATCGTTTTGCAAAAGATGGATTTT------GTATC 102 Query 14387 CATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAAT 14446 || ||| |||||||| | ||||| |||| ||| | |||||||| || ||||| Sbjct 101 CAATTTAATGCCCATTCTGCCTTTTTCTTAACGAAAAAAAGAGTTTCAATGGCGTTAAAC 42 Query 14447 AA 14448 || Sbjct 41 AA 40 >seq5663 Length=92856 Score = 109 bits (120), Expect = 5e-19 Identities = 160/224 (71%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 |||||||||| || || || || || ||||| || || |||||||| |||| || | Sbjct 79466 CCTCATCTCTGCTTATTAGCTCATTGCTGAATGTCAAACCAGGCATCAAACCTCTCTTCT 79407 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | ||||| || || | ||| || || || || ||||||||||| |||||||||||||| | Sbjct 79406 TCAACCAGAAAATAGAAGCAAAAGAGCCAGAGAAGAATATTCCTTCAACTGCAGCAAATG 79347 Query 14346 CTATTAATCGTTCTCCAAACGATGC-TTTTTTGTTCGATATCCATTTTCTAGCCCATTCA 14404 | | || ||| || ||||| || || | || | ||||| || |||||| ||| Sbjct 79346 CAACTACTCGCTCACCAAAGGAAGCACTCGCTGAGC-TGATCCAGTTAAGAGCCCAATCA 79288 Query 14405 GAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14448 | || || || | | | | |||||||||||||| ||||| Sbjct 79287 GCCTTCTTCTTGACACACGGTAGAGTTTCAATAGCATTGAATAA 79244 Score = 107 bits (118), Expect = 2e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 13850 AAAAACTAAAAATCAACATCTAACGAAAAAACATTATCGTCTTTGTTAGAAATAACGCCC 13909 || ||||||||||| |||| || | ||| || ||| ||||| || || ||||| || Sbjct 86213 AAGAACTAAAAATCTGCATCCAAGGTAAAGCAATGATCTTCTTTCTTTGACATAACTCCG 86154 Query 13910 ATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATA 13969 ||||||||||||| ||| | ||||| ||||| || ||||| ||||| || |||| Sbjct 86153 CACTTTTGATATTCACCAACCTTCTTTTCGAAGAAATTTGTTTTTCCTTCAAGACTTATA 86094 Query 13970 TTTTCCATAAAATCAAATGGATTT 13993 | |||||||||||||| |||||| Sbjct 86093 TGCTCCATAAAATCAAAGGGATTT 86070 Score = 82.4 bits (90), Expect = 7e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 14473 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTG 14532 ||| || ||||| ||||| | ||| ||||||||||| |||| ||||| || || || || Sbjct 73652 AATATAAGTATCTATAAGAAGGCTGTACATTTCAGAATGTACATTTTCAATGGCGATTTG 73593 Query 14533 AAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAA 14592 || ||||||||||| || ||||| | | ||| || ||| | ||| ||||| || | Sbjct 73592 GAACCCATAAAAACACCTTGCTTCAGTCACTTGAACTTCTTGGCTAAACCTTTCAACCTA 73533 Query 14593 ATTTT 14597 |||| Sbjct 73532 TTTTT 73528 >seq84794 Length=3643 Score = 86.0 bits (94), Expect = 6e-12 Identities = 125/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 13889 TCTTTGTTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTA 13948 |||||||| | || || || ||| || ||||| | ||| | ||||||||| || | Sbjct 3399 TCTTTGTTGAACATGACTCCACATTTCTGTTATTCTCCAACACGTTTTTCAAAAAAACTG 3340 Query 13949 GTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAA-ACAC 14007 ||||| ||||||| ||| ||||||||||||||| || ||| | || | | | | Sbjct 3339 GTTTTTCCTTCCAAACTAATACATTCCATAAAATCAAAAGGGTTT-TCCACGTTATAAAT 3281 Query 14008 TTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTG 14061 ||||||||| || ||||| | | ||||| || || | || ||||||||||| Sbjct 3280 TTTATCACATCCCAGTTCCCACAATAATCGGTCTGCCACAAATTCAATATATTG 3227 >seq27548 Length=17515 Score = 86.0 bits (94), Expect = 6e-12 Identities = 162/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 13857 AAAAATCAACATCTAACGAAAAAACATTATCGTCTTTGTTAGAAATAACGCCCATTTTTT 13916 ||||||| |||| | | ||| | || || |||||||| || || || || ||| | Sbjct 249 AAAAATCCTCATCCAGTGTAAACATATGATTTTCTTTGTTGGACATGACTCCACATTTCT 190 Query 13917 GATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCA 13976 | | ||| | || | ||| | ||| || || ||||| ||||||| ||| ||||| Sbjct 189 GGTGTTCTCCGACACGTTTCTTAAAAAAATTGGTTTTTCCTTCCAAACTAATACATTCCA 130 Query 13977 TAAAATCAAATGGATTTGTTGAC-ATAAACACTTTATCACAACCTAGTTCTAATAGTAAT 14035 |||||||||| || ||| | || || | | ||||||||| || | ||| | | |||| Sbjct 129 TAAAATCAAAAGGGTTT-TCCACGTTATAAATTTTATCACATCCCAATTCCCACAATAAT 71 Query 14036 CTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091 | || || | || |||||||||| ||| || ||||||||| || || || Sbjct 70 CGGTCTGCCACAAATTCAATATATTTCTTCATCAATGTACAATTCATGCCAATCAG 15 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481258899480480