Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq2234 120 2e-22 seq87354 95.1 9e-15 >seq2234 Length=154088 Score = 120 bits (132), Expect = 2e-22 Identities = 154/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 |||||||| ||||| ||||||||||||||||| | | ||| | | ||||||||||||| Sbjct 10712 TGAAGTGTGGATTCCTTTTGAATGTTGTAGTCCGAGAGGGTTCTTCCATCTTCCAATTGT 10653 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242 || || ||| |||| | || ||||||||| || | ||||| || || ||| | Sbjct 10652 TTTCCAGCAAAGATCAATCGTTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTG 10593 Query 18243 TGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTC 18302 ||| || | | ||| || |||| ||||| || | |||||| | |||||||| Sbjct 10592 GCCTTTACATTTTCAATGGTATCACTAGGCTCAACCTCTAGAGTGATGGTCTTGCCGGTG 10533 Query 18303 AATGTTTTTACAAAAATTTGCATTTT-TAAA 18332 | ||||| |||||||| |||||||| |||| Sbjct 10532 AGAGTTTTCACAAAAATCTGCATTTTGTAAA 10502 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| | |||||| | |||| |||||| |||||||| ||||| ||||||||||| | | Sbjct 11876 CCTCCTCTTAGTCTCAAGACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAGTCCGAC 11817 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | |||||| | || ||||||||| |||| | || ||||||||| || Sbjct 11816 AGAGTACGTCCATCTTCTAGCTGCTTGCCCGCAAAGATTAATCGTTGTTGATCAGGAGGG 11757 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||||||||| ||||| | || ||||| | | ||| || |||| ||||| Sbjct 11756 ATACCTTCCTTATCTTGAATTT-TAGCTTTGACATTTTCAATTGTATCACTTGGCTCAAC 11698 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | || || | || || || | ||||| || || |||||||| Sbjct 11697 TTCTAGTGTAATTGTCTTCCCAGTAAGAGTTTTGACGAAGATTTGCAT 11650 Score = 104 bits (114), Expect = 2e-17 Identities = 144/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 18128 TGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCC 18187 ||| ||||||||||| |||||||| || | | || || ||||||||| || || || Sbjct 11619 TGTAGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTCCAACTGCTTACC 11560 Query 18188 CGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTT 18247 ||| | || || || |||||||| ||| | ||||| || || ||||| | |||| Sbjct 11559 AGCAAAAATTAGCCTCTGTTGATCTGGGGGGATACCTTCTTTGTCTTGAATTT-TGGCTT 11501 Query 18248 -GACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATG 18306 ||| | | | | ||||||| ||||| ||| | ||||||| ||||||| || | | Sbjct 11500 TGACGTTTTCTATTGTGTCACTAGGCTCTACTTCCAAGGTGATGGTTTTGCCAGTTAGGG 11441 Query 18307 TTTTTACAAAAATTTGCAT 18325 |||| || ||||||||||| Sbjct 11440 TTTTCACGAAAATTTGCAT 11422 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| | || ||| || || | || ||||| || |||||||| |||||||| || | | Sbjct 12332 CCTCCTCTTAATCTGAGAACTAGATGGAGTGTAGACTCTTTTTGGATGTTGTAATCCGAC 12273 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | |||||| | ||||| || ||| | || || ||||| ||||| || Sbjct 12272 AGGGTACGCCCATCTTCAAGCTGTTTACCAGCAAAAATCAGCCTTTGCTGATCTGGTGGA 12213 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | |||||| ||||| ||||| | ||||| | | ||| || || | || || | Sbjct 12212 ATGCCTTCTTTATCTTGAATTTTTGTTTTGACATTTTCAATTGTATCGCTTGGTTCTACT 12153 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||||||| | || || || | ||||| |||||||||||||| Sbjct 12152 TCTAAGGTGATGGTCTTTCCAGTGAGGGTTTTAACAAAAATTTGCAT 12106 Score = 95.1 bits (104), Expect = 9e-15 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 18111 CTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAA 18170 || || |||| ||| || || ||||| || || || || || || | || ||| | | | Sbjct 12860 CTGAGAACCAAGTGTAGAGTAGATTCCTTCTGGATATTATAATCTGACAAAGTTCTGCCA 12801 Query 18171 TCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTA 18230 ||||| | |||||| || ||| |||| | || || ||||| ||| | ||||| ||| Sbjct 12800 TCTTCAAGTTGTTTACCAGCAAAGATTAACCTCTGCTGATCTGGGGGAATACCTTCTTTA 12741 Query 18231 TCGGCAATTTGTTGCTTG-ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 || |||| | |||| || | ||| || |||| || || ||| | |||||| Sbjct 12740 TCCTGGATTT-TGGCTTTCACATTCTCAATTGTATCACTAGGTTCAACTTCTAAGGTGAT 12682 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | ||||||| |||| ||||| |||||||||||||| Sbjct 12681 GGTTTTGCCAGTCAGGGTTTTAACAAAAATTTGCAT 12646 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||| | |||| || |||| |||||| || ||||||||||| || ||||| || | Sbjct 10965 TCCTCCTCTCAGTCGGAGAACCAGGTGAAGAGTGGATTCTTTTTGGATATTGTAATCTGA 10906 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | || | |||||| | || || || ||| |||| || || || ||||| || Sbjct 10905 AAGAGTACGGCCATCTTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCTGGTGG 10846 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | || || ||||| ||| | ||| || | | | | ||||||| ||||| Sbjct 10845 GATACCCTCTTTATCTTGAATCTTGGCCTTCACATTTTCGATTGTGTCACTAGGCTCCAC 10786 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| |||||| |||| || |||| || || ||||| || ||||| Sbjct 10785 TTCAAGAGTGATGGTTTTTCCAGTCAGAGTCTTCACAAAGATCTGCAT 10738 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 || || || |||||||| |||||||||||||| | | || | |||||| | ||| Sbjct 11396 TGTAGAGTAGATTCTTTCTGAATGTTGTAGTCCGATAGAGTACGGCCATCTTCTAGTTGC 11337 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242 || || ||| | || | | ||||| || ||| | ||||| ||||| |||| | Sbjct 11336 TTACCAGCAAAAATCAAACGCTGTTGGTCTGGGGGAATACCTTCTTTATCTTGGATTTTT 11277 Query 18243 TGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTC 18302 |||||| | | | | ||||| | || || |||| | ||| ||| | || || ||| Sbjct 11276 GTCTTGACATTTTCTATTGTGTCGCTAGGTTCACTTTCTAAGGTTATGGTCTTCCCTGTC 11217 Query 18303 AATGTTTTTACAAAAATTTGCAT 18325 || ||||| ||||| |||||||| Sbjct 11216 AAAGTTTTGACAAATATTTGCAT 11194 >seq87354 Length=3251 Score = 95.1 bits (104), Expect = 9e-15 Identities = 224/333 (67%), Gaps = 8/333 (2%) Strand=Plus/Plus Query 91303 TAATCGACAAGTTCGATCTTGTCATAACCGGCACCGATTGCGCTTGTCAATTCGTACACT 91362 || |||||| ||| || ||||| ||||| ||||| || || ||| ||||| ||| | Sbjct 688 TAGTCGACATCTTCAATTTTGTCGTAACCCGCACCAATCGCTGATGTTAATTCATACTCA 747 Query 91363 TTACCTGTTTGTGCTTGCAAATCATCCAACATGTCACGCAACTCTTTTAGCAAAACAATG 91422 |||||| | |||| | | ||| | ||| | |||| ||||| | || ||| | Sbjct 748 CGACCTGTCTCGGCTTCAAGCTTATCAAGCATCGCTCGCAGCTCTTGCATTAACGCAACG 807 Query 91423 TATGTAGCAGCGTC-GCGTTTCGGATCGCCAATGGCCGGATTAGCGCCTTTACCGCCCGG 91481 |||| || |||| || | || ||||| | |||||||| || | ||| || || Sbjct 808 TATGCAGGGCCGTCAGCAACTGGG-TCGCCTAAATTTGGATTAGCACCCTGACCACCAGG 866 Query 91482 AAATTCCCAATCAATATCTACACCGTCAAAAAATTTCCAAACTTGCAAAAATTCTTTAAC 91541 ||||||| ||||||||||||||||| | || ||||| | ||||| |||| | Sbjct 867 GTATTCCCAGTCAATATCTACACCGTCGTAGAACTTCCACGTTCTTAAAAACTCTTCCAT 926 Query 91542 CGAATCAACGAACACGTTTCTTCGTTTGACATCGTGCATAAAATA---GAACGGGTCCGA 91598 || | || | |||| || || || | | | ||||||| || ||||| || Sbjct 927 TGATGCCAC--AAACGTGTC-GCGATTTGCTTTATCGGTAAAATAAGCAAATGGGTCTGA 983 Query 91599 CAAAGTCCAGCCACCGATGGACGGTAAAACTTT 91631 |||||||| ||||| | || ||||||| ||| Sbjct 984 TAAAGTCCAACCACCCACCGATGGTAAAATTTT 1016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378510723011820