Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_003278.1 Length=35580 Score E Sequences producing significant alignments: (Bits) Value seq10932 1232 0.0 >seq10932 Length=55943 Score = 1232 bits (1366), Expect = 0.0 Identities = 1340/1758 (76%), Gaps = 63/1758 (4%) Strand=Plus/Minus Query 31659 CTGGGCGGNNNCGCCGCAGGCTTCAACCGGGCGCGTCCGCGGGTCGGCAACGTCGAGGCC 31718 |||||||| |||| || ||||||||||| || ||| ||||| ||||| ||||| Sbjct 5354 CTGGGCGGCGGCGCCAAGGGTTTCAACCGGGCCCGCCCGGTAGTCGGAAACGTACAGGCC 5295 Query 31719 CATTGGGAATGCCTTGGTGGCATCGACGTGGACCCGGCCGGCCTCCGCGACTTCGAGCGC 31778 | ||||||||||| || ||||||||||| ||||||||||| || ||||||||||||| Sbjct 5294 CGCTGGGAATGCCTGGGCGGCATCGACGTTGACCCGGCCGGTCTGCGCGACTTCGAGCAG 5235 Query 31779 CTGGCCGGTGTCCCGGGCACCCTGCTGGACCTGTTCACCCGCGACCAATACATCCGCTTC 31838 |||||||| || || ||||||||| ||||||||||||||||||| || |||| |||||| Sbjct 5234 CTGGCCGGCGTTCCCGGCACCCTGATGGACCTGTTCACCCGCGATCAGTACACCCGCTTT 5175 Query 31839 CATGGAACGGAGCCTCCCGCCGGTTGGCGGGAGGCAACCCCGGAGGAAATCCGCCGCGCC 31898 || || | || || || || |||||||| ||||| | | || || | |||||||| Sbjct 5174 CACGGTGCCGAACCGCCTGCAGGTTGGCGCGAGGCCTCGGCCGACGACGTGCGCCGCGCT 5115 Query 31899 GCCGGCGGGCGC-CGACCGGATGCCGTGTTCATCAGCTCGCCCTGCAAAGGCGCCAGCGG 31957 || | | | || || |||||||||||||||||| |||||||| ||||||||||| Sbjct 5114 GC-GCAGAACAAGCGGCCCGATGCCGTGTTCATCAGCAGCCCCTGCAAGGGCGCCAGCGG 5056 Query 31958 CCTGCTGTCGGAGAAGATGAGCCTGACTCCGAAGTACCAGGCGCTGAACGAGTTGACGCT 32017 ||||| || ||||| ||||||| ||| |||||||||||||| ||||||||| | || | Sbjct 5055 TCTGCTCTCCGAGAAAATGAGCCAGACCCCGAAGTACCAGGCCCTGAACGAGCTCACCTT 4996 Query 32018 GCGCTGCATCTGGCTGATGGGCGAGGCATGGGCTGATGACCCGGTGCCGCTGATCGTCTT 32077 ||||||||||||||| ||||| ||||| ||| || ||||||||||||||||||||||| Sbjct 4995 GCGCTGCATCTGGCTCATGGGTGAGGCCTGGAAGGACGACCCGGTGCCGCTGATCGTCTT 4936 Query 32078 CGAGAACGTCCCGCGTCTGGCGAGCCGCGGCCGGCACCTGCTGGACCAGATCAACAGCCT 32137 ||||||||| ||||| ||||| | ||| |||||||||||||| ||||||||||||||||| Sbjct 4935 CGAGAACGTGCCGCGCCTGGCCACCCGTGGCCGGCACCTGCTCGACCAGATCAACAGCCT 4876 Query 32138 GCTCGGTGGCTTCGGCTACGCCGTGGCGGAAACCACTCACGACTGCGGCGAGCTGGGCGG 32197 |||| | || |||||||||||||||||||||||| |||||||| |||||||| ||||| Sbjct 4875 GCTCAGCTACTACGGCTACGCCGTGGCGGAAACCACCCACGACTGTGGCGAGCTCGGCGG 4816 Query 32198 TCTGGCCCAGTCGCGGAAGCGCTTCCTGCTGGTGGCGCGGCACGTCGAGAAAGTGCCGCC 32257 ||||||||||| || ||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 4815 CCTGGCCCAGTCCCGCAAGCGCTTCCTGCTGGTGGCGCGCCACGTCGAGAAGGTGCCGCC 4756 Query 32258 CTTCCTGTACGAGCCGGAGAAGAAGAGCCTGCGCGCCGTCGGCGACATCCTCGGCCGCAT 32317 |||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct 4755 CTTCCTGTACGAACCGGAGAAGAAGAGCCTGCGCGCAGTCGGCGATATCCTCGGCCGCAT 4696 Query 32318 GCCGCTGCCCGGCGATATCGACGCCGCCGGCCCGATGCACCGTGTGCCATCCCTGCAGTG 32377 ||||||||| ||||||||||| |||||||||||||||||||| ||||| || ||||| || Sbjct 4695 GCCGCTGCCAGGCGATATCGAAGCCGCCGGCCCGATGCACCGCGTGCCGTCGCTGCAATG 4636 Query 32378 GAAGACCTGGGTTCGCCTGGCACTGGTGCGAGCCGGCAGCGACTGGCGCAGCCTGAACGA 32437 | |||||||||| ||||| || |||||||| ||||||||||||||||||||||| || || Sbjct 4635 GCAGACCTGGGTGCGCCTCGCCCTGGTGCGTGCCGGCAGCGACTGGCGCAGCCTCAATGA 4576 Query 32438 CCTCGCCGTCGAGGACGGCTACCTGCGCGATCTGATCATCGTCCCGAAATACCGGGCTGG 32497 || || ||||||| || ||||||||| ||||||||||| ||| | ||||| || Sbjct 4575 GCTGGCGATCGAGGATGGACGCCTGCGCGACCTGATCATCGTGCCGGAGTACCGCAGCGG 4516 Query 32498 CTACATGGGCGTGCACGGTTGGAACGACAGCACGGGCACCATCGCCGGTCGCAGCAGCCC 32557 ||| | ||||||||||| ||| | || | || |||||||||||||| ||||||||||| Sbjct 4515 ATACCTCGGCGTGCACGGCTGGGAGGATACCAGCGGCACCATCGCCGGCCGCAGCAGCCC 4456 Query 32558 CACGAACGGCGCATTCTCTGTCGCGGACCCGCGCGCGCCGGCA-AACGCC--CTGCAAT- 32613 || || ||||||||||| ||||| || || || | ||| || |||| ||| ||| Sbjct 4455 AACCAATGGCGCATTCTCCGTCGCCGATCCCCG-GTACCGCCAGGCCGCCAACTGGAATC 4397 Query 32614 ---ACCAGCAGTACGGCGTGCGCCGCTGGACCGACACCTCGGGCGCCATCATCGGCGTCA 32670 |||||||| |||||| ||||||| ||| | ||| ||||| ||| | Sbjct 4396 ACGGCCAGCAGTTCGGCGTCATCCGCTGGGACGATTCGTCGCCGACCATCCCCGGGCAGA 4337 Query 32671 AGTCGCCCGGCCAAGGCACGTACTCCGTCGCCGATCCCCG------------------CG 32712 ||| ||||| ||||| | | ||| ||||||||||| | Sbjct 4336 CCATGCCAGGCCAGGGCACCTTCAGCGTGGCCGATCCCCGATACCACAACTGGCACCAGG 4277 Query 32713 GCCAGAGTTTCGGCAAGTACCCGGTCACCGACTGGGACGGCCCAGCCGGCACCGTGATC- 32771 || ||| | ||||| | ||| | | |||||||||| |||||||||||| | Sbjct 4276 GCGCGAGCAGCCGCAAGCTGCACGTCGGCAAGTGGGACGGCCACACCGGCACCGTGACCG 4217 Query 32772 GCGGCCAGTACTACCGGCCAG-GGTGCATTTGCTGTCGCGGACCCGCGCCACCG---TGG 32827 || ||| | | ||||| || || | | |||| |||||||| |||| ||| Sbjct 4216 GCTCGCAGCAGGTC--GCCAGCGGCGCCCTGTCGATCGCTGACCCGCG--ACCGAACTGG 4161 Query 32828 CCCTGCCAAACACTCTAACGAGTTCCGCATCGTGCC-TTGG---GACCGCCACGCACAA- 32882 | | | ||| || | | |||| ||||||| || | |||| | |||| | Sbjct 4160 AACCGTC--ACAGCGGAA--ACTACCGCGTCGTGCCATTCGACAAACCGGCCGGCACCAT 4105 Query 32883 ----GCGGTCACCA---GTGCCCA---TGGCACAGGCCAGTGCGTCGAAGACCCGCGCGT 32932 || | | || ||| || |||| ||| |||| ||| | ||| || ||| | Sbjct 4104 CATCGCCGGCGGCAAGGGTGTGCAGGGTGGC-CAG--CAGTCCGTGGCAGATCCTCGCAT 4048 Query 32933 GCT-CAGCCGGACGAAGGGAGACCCGTATCTCACTGGCGGCCACTACGGCGTAGTTGGGT 32991 || || | | | ||||| ||| || || || || |||||||||||||| | || Sbjct 4047 CCTGCATCGCGGC-AAGGGCGACAACTACCTGACCGGTGGCCACTACGGCGTTATCCCGT 3989 Query 32992 TCGACCAATCCGCCGGCGCGGTGTCGGCCAGTGCGCGGCACGACAACGGTCGATGGAGCG 33051 ||||||| | |||||| | | || || |||| |||||| ||| || | |||| Sbjct 3988 TCGACCAGAACTGCGGCGCAATCGCCGCAAGCTCGCGCTACGACAGCGGGCGCTTCAGCG 3929 Query 33052 TGGCCGATCCGCGCATGCCGAAGGCGAACGACCGGCTGACCTGCATCATCCAGTCGC-TG 33110 | || || |||||||| ||| || || |||||||||||||||||||||| | || | Sbjct 3928 TCGCAGACCCGCGCATCCCGGCAGCCAATGACCGGCTGACCTGCATCATCC-GCAGCGTC 3870 Query 33111 GATGGCACCTGGCACAGGCCGTTTACCACCCTGGAACTCGCCGCGCTGCAGAGCTTGGTC 33170 || |||||||||||| | || || ||||| |||| || |||||||||||||||||| Sbjct 3869 GACGGCACCTGGCACCGCCCCTTCACCACTTTGGAGAAAGCAGCGCTGCAGAGCTTGGTC 3810 Query 33171 GACCCCGAAGAGCAGTTGGTCCTCGACGGCCTGAGCGACAGCGACTGGCGCGAGCGGATC 33230 || || ||||||||| || | || || ||||||||||||| |||||| ||||||| ||| Sbjct 3809 GATCCGGAAGAGCAGCTGATTCTGGATGGCCTGAGCGACAAGGACTGGAGCGAGCGCATC 3750 Query 33231 GGCAATGCGGTTCCGCCGGCTGCGGCCGAGGCCATCGCCGGCGTGATGGGCACCACCCTG 33290 ||||| || || || ||| ||| || || || |||||| ||| ||||||||||||||| Sbjct 3749 GGCAACGCCGTGCCACCGTATGCAGCAGAAGCGATCGCCCACGTTATGGGCACCACCCTG 3690 Query 33291 TTGTTGGCTGAGGCTGGCGAGACCTTCCTGCTCAGTAGCACGCCGATCTGGGTGCGTCAG 33350 || |||| | |||||||||||| ||||||| |||| ||| ||||||||||| | | Sbjct 3689 CTGCTGGCCGCCCAGGGCGAGACCTTCATGCTCAGCAGCATGCCTATCTGGGTGCGACCG 3630 Query 33351 GTCGCCGTTGGACTGAGT 33368 || || || || |||||| Sbjct 3629 GTGGCGGTCGGGCTGAGT 3612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113490973979344