Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_003298.1 Length=38208 Score E Sequences producing significant alignments: (Bits) Value seq34826 87.8 4e-13 >seq34826 Length=13225 Score = 87.8 bits (96), Expect = 4e-13 Identities = 179/266 (67%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 30981 GTAGAGAAGTACGCTATGGATAAGGCTTACGGTATCTCCCACTCAGACCAGTTCACCAAC 31040 || ||||||||||| | || ||||| || || ||| |||||| |||| ||||| Sbjct 5920 GTCGAGAAGTACGCCAACGACAAGGCGTATGGCATCAGCCACTCCGACCGCTTCACGGCT 5861 Query 31041 AGTTCCATAATCGAAGAGAACATTGAGGGCTTAGTAGGTATAGAGAACAACTCATTCCTT 31100 || | | || ||| || | ||| | | ||| | ||||||||| | ||| Sbjct 5860 GACTCGCTGGTAGAGGAGCACCTGAAGGACGGGGCAGGCCTGGAGAACAACGACTACCTC 5801 Query 31101 GAGGCACGTAACTTGTTTGATTCGGACCTATCCATCACTATGCCAGACGGACAGCAATTC 31160 || || |||||| | || || || || | || ||||| ||| ||||| |||| ||| Sbjct 5800 GAAGCTCGTAACCTCTTCGACTCCGATATGTCGATCACCGCGCCTGACGGCCAGCCGTTC 5741 Query 31161 TCAGTGAACGACCTAAGGGACTTCGATATGTTCCGCATCATGCCAGCGTATGACCGCCGT 31220 | ||||| ||||| | |||||| | || | || | | || ||| |||||| | Sbjct 5740 GCTGTGAATGACCTCCGAGACTTCAACCTGCTTCGGGTGGTCCCGCAGTACGACCGCAGG 5681 Query 31221 ATCAATGGTGACATCGCTATCATGGG 31246 |||| ||||||||||| ||||||| Sbjct 5680 GTCAACGGTGACATCGCCCTCATGGG 5655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121882574891440