Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_003315.1 Length=31508 Score E Sequences producing significant alignments: (Bits) Value seq7 116 7e-22 seq4 113 9e-21 seq98207 96.9 7e-16 seq26939 95.1 2e-15 seq520 95.1 2e-15 seq19351 89.7 1e-13 >seq7 Length=747525 Score = 116 bits (128), Expect = 7e-22 Identities = 73/79 (92%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 357 TTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACC 416 |||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 152139 TTGGTGGGTCATGATGGATTCGAACCATCGACCAACGGATTAAAAGTCCGCTGCTCTACC 152198 Query 417 GACTGAGCTAACGACCCAA 435 ||||||||| ||||||| Sbjct 152199 AGCTGAGCTAATGACCCAA 152217 Score = 114 bits (126), Expect = 3e-21 Identities = 75/83 (90%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 ||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 152240 TGGTGGGTCATGATGGATTCGAACCATCGACCAACGGATTAAAAGTCCGCTGCTCTACCA 152299 Query 418 ACTGAGCTAACGACCCAATTAGA 440 ||||||||| |||||| || || Sbjct 152300 GCTGAGCTAATGACCCACTTCGA 152322 Score = 113 bits (124), Expect = 9e-21 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 357 TTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACC 416 |||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 152343 TTGGTGGGTCATGATGGATTCGAACCATCGACCAACGGATTAAAAGTCCGCTGCTCTACC 152402 Query 417 GACTGAGCTAACGACCC 433 ||||||||| ||||| Sbjct 152403 AGCTGAGCTAATGACCC 152419 >seq4 Length=924746 Score = 113 bits (124), Expect = 9e-21 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 357 TTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACC 416 |||||||| |||||||||||||||||||||||||| ||||||| ||||| |||||||||| Sbjct 715793 TTGGTGGGCCGTGAAGGATTCGAACCTTCGACCAATGGATTAAGAGTCCACTGCTCTACC 715734 Query 417 GACTGAGCTAACGACCC 433 |||||||||||| ||| Sbjct 715733 AACTGAGCTAACGGCCC 715717 >seq98207 Length=2386 Score = 96.9 bits (106), Expect = 7e-16 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 ||||||||| ||| ||| | ||||| |||||||| ||||||||||||| |||||||||| Sbjct 112 TGGTGGGTCATGATGGACTTGAACCATCGACCAATGGATTAAAAGTCCACTGCTCTACCA 171 Query 418 ACTGAGCTAACGACCC 433 |||||||||| ||||| Sbjct 172 ACTGAGCTAATGACCC 187 Score = 96.9 bits (106), Expect = 7e-16 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 ||||||||| ||| ||| | ||||| |||||||| ||||||||||||| |||||||||| Sbjct 251 TGGTGGGTCATGATGGACTTGAACCATCGACCAATGGATTAAAAGTCCACTGCTCTACCA 310 Query 418 ACTGAGCTAACGACCC 433 |||||||||| ||||| Sbjct 311 ACTGAGCTAATGACCC 326 >seq26939 Length=17835 Score = 95.1 bits (104), Expect = 2e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 ||||||||||| || |||||| ||||||||||||||||||||||||||||||| Sbjct 174 TGGTGGGTCGTCCGCGACTCGAACGCGGGACCAACGGATTAAAAGTCCGCTGCTCTACCA 115 Query 418 ACTGAGCTAACGACCCA 434 ||||||||||||||||| Sbjct 114 ACTGAGCTAACGACCCA 98 Score = 93.3 bits (102), Expect = 8e-15 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 ||||||||||| || |||||| ||||||||||||||||||||||||||||||| Sbjct 370 TGGTGGGTCGTCCGCGACTCGAACGCGGGACCAACGGATTAAAAGTCCGCTGCTCTACCA 311 Query 418 ACTGAGCTAACGACCC 433 |||||||||||||||| Sbjct 310 ACTGAGCTAACGACCC 295 >seq520 Length=264922 Score = 95.1 bits (104), Expect = 2e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 357 TTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACC 416 |||||||||||| || |||||| ||||||||||||||||||||||||||||||| Sbjct 227902 TTGGTGGGTCGTCCGCGACTCGAACGCGGGACCAACGGATTAAAAGTCCGCTGCTCTACC 227961 Query 417 GACTGAGCTAACGACCC 433 |||||||||||||||| Sbjct 227962 AACTGAGCTAACGACCC 227978 Score = 93.3 bits (102), Expect = 8e-15 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 ||||||||||| || |||||| ||||||||||||||||||||||||||||||| Sbjct 228098 TGGTGGGTCGTCCGCGACTCGAACGCGGGACCAACGGATTAAAAGTCCGCTGCTCTACCA 228157 Query 418 ACTGAGCTAACGACCC 433 |||||||||||||||| Sbjct 228158 ACTGAGCTAACGACCC 228173 >seq19351 Length=22329 Score = 89.7 bits (98), Expect = 1e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 357 TTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACC 416 |||||||| ||| ||||||||||||||| |||| | |||||| |||| |||||||||| Sbjct 184 TTGGTGGGCCGTCAAGGATTCGAACCTTGGACCTATTGATTAAGAGTCAACTGCTCTACC 125 Query 417 GACTGAGCTAACGACCC 433 |||||||||||| ||| Sbjct 124 AACTGAGCTAACGGCCC 108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100488462977040