Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq4663 232 6e-56 seq18050 226 3e-54 seq38288 214 2e-50 seq5663 134 1e-26 seq8748 125 7e-24 seq77092 114 1e-20 seq929 102 8e-17 >seq4663 Length=104512 Score = 232 bits (256), Expect = 6e-56 Identities = 579/860 (67%), Gaps = 31/860 (4%) Strand=Plus/Plus Query 11363 TCGAAAAAATTAGTCTTACCTTCTAGTGATATATACTCCATAAAGCTAAAAGGATTATAT 11422 || || || |||||||||||| ||| ||||||| |||||||| ||||| || | Sbjct 34255 TCAAAGAAGTTAGTCTTACCTACTAAAGATATATTTTCCATAAAATCGAAAGGGTTGGCT 34314 Query 11423 ACATTGAAGACTTTTTCACAACCTAACTCTGTTAATAATCTATCTGCGACGAATTCTATA 11482 || | ||| || | || || | | | ||||| || || | ||||| ||| Sbjct 34315 GTGTTATAATATTTCTCCAATCCCAAATTAATAAGCAATCTGTCAGCCATAAATTCAATA 34374 Query 11483 TACTGAGACATTAAACAACAATTCATACCTATAAGATCCACCGGAATAGCA-ACTGTCAA 11541 |||| | ||||||| ||||||||| ||||||||| || || | ||| || | || Sbjct 34375 TACTCACACATTAATTTACAATTCATTTCTATAAGATTTACTGGTA-AGCTTACACTTAA 34433 Query 11542 AAACTCCTTTTCTATATTAACCGCATCAATGATTAT--CGACGTTATAACTTCCTTAGA- 11598 ||| | | |||||| | || | || | | ||| ||| | ||| ||| Sbjct 34434 AAATTATTGTTCTATGATGACAGATTCTTTAACTATATCGAGTATGTAAGG-----AGAC 34488 Query 11599 TGGTGGATGTAATAAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTC 11658 | || || |||| |||| || | | || ||||||||||| || | ||||| || Sbjct 34489 TTGTTAATTAAATATTTGTT--AAGGTGA--CATGCAAAATCACAGTGAAGTCCTTCATC 34544 Query 11659 TCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCA 11718 ||| || || |||||||| | || |||| | ||||||| ||| || || || | ||| Sbjct 34545 TCTGCTAATAAGTTCATTGGCGAAGGTTAGGACAGGCATCAGTCCACGATTCTTCAACCA 34604 Query 11719 AAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTAC 11778 || || | |||||||| ||| |||||||||||||| || ||| |||||||||||||| Sbjct 34605 GAAGATTGAAGCAAATGCACCCGAAAAGAATATTCCTTCTACACAAGCAAATGCTACTAC 34664 Query 11779 TCT--TTCTCCATATACCTTGTTGCTAGA-TATCCATTTTCTGGCCCAATCAGCTTTCTT 11835 | | | || || || | || ||||||||| ||||| ||||||||||| Sbjct 34665 ACGAGTGGTAAAT-TAGATTCCGGGTATTGTATCCATTTCAAAGCCCAGTCAGCTTTCTT 34723 Query 11836 TTTTACGCATTCCATTGTTTCTATAGCGTTAAATAAATGCATTTTTTCT-AT-ATTATCT 11893 || | |||| ||||| ||| | |||| ||||| | | |||| || | ||| Sbjct 34724 CTTAATGCATGGTATTGTGGTAATAACATTAAGCAAATG--TGTCTTCTGATCCTGATCA 34781 Query 11894 CTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATT 11953 | | ||| | |||||||| || | |||||| || | ||| ||||| || || |||| | Sbjct 34782 GTAATATAAGCATCTATTAGTAGAGAATACATCTCGGTATGGATATTCTCTATTGCTACT 34841 Query 11954 TGAAATCCATAGAAACATCGTGCCTCT-GAACACTGTACATCCACATAAAATCTTTCCGC 12012 || |||||||| || ||| ||| | | | ||| | || || | ||||||||| | Sbjct 34842 TGGAATCCATAAAAGCATTTTGCTTTTAGTACAAT-CACTTCAGTAATAAATCTTTCTAC 34900 Query 12013 TAAATTCTCATTTACAATACCATCACTAGATGC-AAAAAATGCTAGTATATGTTTTATAA 12071 | || |||| ||||| ||||| || || |||||| || || || | | |||| Sbjct 34901 AAGATCTGCATTCACAATTCCATCTGATGAAGCAAAAAAAAGCAAGGATGTTTGAAATAA 34960 Query 12072 AGTATTTTTCGTCTTTAGTTAATTTATCCCAATCATCTAAATCTTTTGATAAATCTACTT 12131 | ||| | |||| | ||| | || |||||||| | ||| ||||| ||| |||| Sbjct 34961 AATATCTCTCGTTATCAGTCAGAGTAGACCAATCATGTCTATCAGCTGATAGATCAACTT 35020 Query 12132 CTTCAACGGTCCAAA---AACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGAT 12188 ||||||| ||||| | |||| | | | | ||||||||| | ||| |||||||| | Sbjct 35021 CTTCAACTGTCCAGAATGAACT---CTCAGCCTTTTTATACATCTGCCATATATCATGGT 35077 Query 12189 ACTTAATAGGGAAAATAACG 12208 || | ||||| || | |||| Sbjct 35078 ACCTGATAGGAAAGAGAACG 35097 >seq18050 Length=32055 Score = 226 bits (250), Expect = 3e-54 Identities = 490/720 (68%), Gaps = 15/720 (2%) Strand=Plus/Plus Query 11339 TTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATAC 11398 || || ||||| | || ||| || ||| |||| || || ||||| | ||| | Sbjct 11576 TTCTGGTATTCCCCGACACGTTTTTAAAAACAATTGGTTTTTCCTTCCAAACTAATACAT 11635 Query 11399 TCCATAAAGCT-AAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAA 11457 |||| ||| | |||||| || | ||| | | | ||| ||||| || || || || Sbjct 11636 TCCAAAAAAATCAAAAGGGTTTTCCACAATATAAATTTTATCACACCCCAATTCCCACAA 11695 Query 11458 TAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAG 11517 ||||| ||||| || ||||| ||||| || || || ||||||||| || || || Sbjct 11696 TAATCGGTCTGCCACAAATTCAATATATTGCTTTATCAATGTACAATTCATGCCAATGAG 11755 Query 11518 ATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCAT-CAATG-ATT 11575 || || | || | || ||||| || | || || | || |||| | || | | Sbjct 11756 GGATACTGGTAATGCCTCGGTTAAAAATTCTTGCTCAATCGTTACGGCATACGATATAAT 11815 Query 11576 ATCGACGTTATAACTTCCTTAGATGGTGGATGTAATA---AATGTTTAAACATTAAACAC 11632 | || | ||| | |||||||| | | | || |||| || |||| ||| Sbjct 11816 TTGCACAATTTAA--TGCTTAGATGATTTGTTTTTTACGTAATGATTGAACAAGTGACAG 11873 Query 11633 GCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCG 11692 | |||||| || |||| ||||| |||| ||| || | || || ||| ||||||| Sbjct 11874 GAAAAATCGCAGTGTAGCCCTTCATCTCGACTAATCAACTCGTTGCTAAACGTTAATCAA 11933 Query 11693 GGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATT 11752 ||||| ||||| ||||| |||| |||||| || || ||||| ||||| || || | ||| Sbjct 11934 GGCATTAATCCCCGTTTCTTTAACCAAAAAATGGCCGCAAAGGAACCTGAGAAAAGGATT 11993 Query 11753 CCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATACCTTGTTGCTAGATATCCAT 11812 || |||||||| ||||| || || | | || | | | | ||| | | |||||| Sbjct 11994 CCTTCCACAGCGGCAAAGGCCACCAGCCGTTTTGGAAAAGACGGGTT--TTG-TATCCAA 12050 Query 11813 TTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAATAAA 11872 ||| | ||| || || || || || ||||| | ||||| || |||||||| || Sbjct 12051 TTTAATGACCATTCTGCCTTTTTCTTAACGCAGGAAAGGGTTTCAATGGCGTTAAACAA- 12109 Query 11873 TGCATTTTTT-CTATATTATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGA 11931 || ||||||| || || ||||| || || || || || || || ||||||||||| Sbjct 12110 TGTATTTTTTTCTTGATGATCTCGAACGAGGGTCTCAATCAACAAGCTGTACATTTCTGA 12169 Query 11932 ATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACAC-TGTA 11990 |||||||||||| || || || ||||| |||| || || || ||||| || ||| | || Sbjct 12170 ATGAATATTTTCAATGGCAATCTGAAAGTCATAAAAGCAACGAGCCTC-GATCACTTTTA 12228 Query 11991 CATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAA 12050 | || | ||| | |||| ||||||| |||||||||||||| ||||| | ||||||| Sbjct 12229 CTTCACGAGCAAAGCGTTCCACTAAATTTTCATTTACAATACCTTCACTGGCGGCAAAAA 12288 >seq38288 Length=11396 Score = 214 bits (236), Expect = 2e-50 Identities = 377/541 (70%), Gaps = 15/541 (3%) Strand=Plus/Plus Query 11613 AATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTT 11672 |||| || |||| ||| |||||||| || |||| ||||| |||| ||| || | | Sbjct 7654 AATGATTGAACAAGTGACAGGCAAAATCCCAGTGTAGTCCTTCATCTCGACTCATCAACT 7713 Query 11673 CATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAA 11732 || ||| |||||||| ||||| ||| | ||||| |||| |||||| ||||| | || Sbjct 7714 TGTTGCTAAACGTTAATCCAGGCATTAATTCCCGTTTCTTTAACCAAAAAATAGCCGAAA 7773 Query 11733 ATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA 11792 | ||||| || || || ||||| |||||||| ||||| || || | | || | || | | Sbjct 7774 AGGAACCTGAGAAAAAGATTCCTTCCACAGCGGCAAAGGCCACCAACCGTTTTGCAAA-A 7832 Query 11793 CCTTGTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTG 11852 | | | | |||||| ||| ||||| || || || || || | ||| | | Sbjct 7833 GATGGATTTTG--TATCCAATTTAATGCCCATTCTGCCTTTTTCTTAAAGCAGGAAAGGG 7890 Query 11853 TTTCTATAGCGTTAAATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCT--AT 11910 |||| || |||||||| || | |||||||| || ||||| | || | |||| || Sbjct 7891 TTTCAATGGCGTTAAACAATTTATTTTTTTCTTGATGATCTC--AAATGAGGATCTCAAT 7948 Query 11911 TAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACA 11970 | || || |||||||||||||| |||||||| || || || ||||| ||||| || || Sbjct 7949 CAGCAAGCTGTACATTTCTGAATGTATATTTTCAATGGCAATCTGAAAGCCATAAAAGCA 8008 Query 11971 TCGTGCCTCTGAACACTGT-ACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAA 12029 || | || | |||| | || || | || | |||| ||||||| ||| |||||| Sbjct 8009 ACGAACTTCGGT-CACTTTGACTTCGCGAGCGAAGCGTTCCACTAAATTTTCAATTACAA 8067 Query 12030 TACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGT---ATTTTTCGTCTT 12086 |||||||||| | |||||||| || || | ||| | ||| | |||| ||| Sbjct 8068 TACCATCACTGGCGGCAAAAAAGGCCAGAACATGGGAAAGAAAATGCCATTTATCG---G 8124 Query 12087 TAGTTAATTTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAA 12146 |||||| | |||||||| | |||||| || ||||| |||||||| | ||||| | Sbjct 8125 GGGTTAATCTTTCCCAATCTCCCCCATCTTTGGACAAATCCACTTCTTCTGCCGTCCAGA 8184 Query 12147 A 12147 | Sbjct 8185 A 8185 >seq5663 Length=92856 Score = 134 bits (148), Expect = 1e-26 Identities = 152/201 (76%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 12014 AAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAG 12073 || || ||||| ||||| |||||||| | |||||||| |||| ||||| ||||| Sbjct 71992 AAGTTTTCATTCACAATGCCATCACTGGCAGCAAAAAAGGCTAAAATATGGGAGATAAAA 71933 Query 12074 TATTTTTCGTCTTTAGTTAATTTATCCCAATC-ATCTAAATCTTTTGATAAATCTACTTC 12132 | ||||| || ||||||| |||||||| ||| | |||||||||||| || ||||| Sbjct 71932 TGCTTTTCTTCCGGTTTTAATTTTTCCCAATCTATC-AGATCTTTTGATAAGTCAACTTC 71874 Query 12133 TTCAACGGTCCAAAAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTT 12192 |||| | |||||||| ||| | | || || ||||||| |||||| || ||||||| Sbjct 71873 TTCAGCAGTCCAAAATGATGCTTCAGCTTTCTTGTACATTTGCCAGATGTCCTGATACTC 71814 Query 12193 AATAGGGAAAATAACGAACCT 12213 |||||| || || || ||||| Sbjct 71813 AATAGGAAATATGACAAACCT 71793 Score = 118 bits (130), Expect = 1e-21 Identities = 161/221 (73%), Gaps = 3/221 (1%) Strand=Plus/Minus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || ||||| |||||||| ||||| ||||| || || |||||||| |||| || || Sbjct 79464 TCATCTCTGCTTATTAGCTCATTGCTGAATGTCAAACCAGGCATCAAACCTCTCTTCTTC 79405 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | ||| || |||| |||||| || ||||| ||||||||||| || || || |||||||| Sbjct 79404 AACCAGAAAATAGAAGCAAAAGAGCCAGAGAAGAATATTCCTTCAACTGCAGCAAATGCA 79345 Query 11774 ACTACTCTTTCTCCATA-TACCTTGTTGCT-AGAT-ATCCATTTTCTGGCCCAATCAGCT 11830 ||||||| || ||| | | | ||| || | ||||| || ||||||||||| Sbjct 79344 ACTACTCGCTCACCAAAGGAAGCACTCGCTGAGCTGATCCAGTTAAGAGCCCAATCAGCC 79285 Query 11831 TTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAATAA 11871 ||||| || || || | ||||| ||||| || ||||| Sbjct 79284 TTCTTCTTGACACACGGTAGAGTTTCAATAGCATTGAATAA 79244 >seq8748 Length=68017 Score = 125 bits (138), Expect = 7e-24 Identities = 110/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 37138 ACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATG 37197 || ||||| ||||| ||||| || ||||| ||||| ||||| |||||||| || || || Sbjct 28658 ACTTGAAATTCTCCTGATAACACCCTTCTGGTATAAATATTACTAGTATAAGGCTCTATA 28717 Query 37198 GACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGG 37257 || ||||| || | ||| || |||| |||||| ||||| ||||||||||| | || || Sbjct 28718 GATTCATTGTTTCCTAAAATCTGAGCTGTAGAAGCAGTTGGCATTGGTGCCACAAGCAGA 28777 Query 37258 CTATTTCTCAATCCATG 37274 || |||||||||||||| Sbjct 28778 CTGTTTCTCAATCCATG 28794 Score = 114 bits (126), Expect = 1e-20 Identities = 126/168 (75%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 36864 CCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGT 36923 ||||||||| ||||||||||| || | |||| | || |||| | | |||| | | | Sbjct 27353 CCATCCGTAGAAATGCATACTTGTTATTTTTCCATAATTAGGTTCAGCTATGTGGACATT 27412 Query 36924 CATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTT 36983 | || ||||||||||| ||| | || |||||||| |||||||| | ||| |||| ||| Sbjct 27413 TAAAGACTGACTTTGATCAATATAAGCTCCTCTGTCAGCTGCCATCTTTAAGATACTTTT 27472 Query 36984 TTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGG 37031 |||||| || ||||| || ||| ||||| || || | |||||| || Sbjct 27473 TTGAGAAATTTCCCACACTGTTCGATATAGTTTCTTAAGATTATCAGG 27520 Score = 105 bits (116), Expect = 6e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 38392 CTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAAC 38451 || || | ||||||| |||||||| | ||||||||||| ||||| ||||| | ||| Sbjct 40610 CTTGAAAGTTGAGGCTTAGGAGTTCCAGAATTAAATAATGTGGGAGAAGCATGAGTAAAC 40669 Query 38452 CATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATA 38511 ||||| || |||| | | || ||||| ||| || |||| || || | ||||| || Sbjct 40670 CATTTATCGGACATTAAGTGGTAGGTTTCGATTGCAGCATCAATGTCCTCACCGTGGATT 40729 Query 38512 CCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 || | |||||| ||||| | ||||||||| || ||||| Sbjct 40730 CCAACAGATACTCTCATCAACATATGTTGAGGCCTTTC 40767 >seq77092 Length=4929 Score = 114 bits (126), Expect = 1e-20 Identities = 184/262 (70%), Gaps = 3/262 (1%) Strand=Plus/Minus Query 11633 GCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCG 11692 ||||||||||| |||| ||||| |||| ||| || | ||| || ||| |||||||| Sbjct 275 GCAAAATCACAGTGTAGTCCTTCATCTCGACTAATCAATTCGTTGCTAAACGTTAATCCA 216 Query 11693 GGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATT 11752 ||||| ||||| ||||| |||| || ||| || || ||||| ||| || || || ||| Sbjct 215 GGCATTAATCCCCGTTTCTTTAACCGAAAAATGGCCGCAAAGCAACATGAGAAAAAGATT 156 Query 11753 CCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATACCTTGTTGCTAGATATCCAT 11812 || |||||||| ||||| || || || || | || | | | | | | |||||| Sbjct 155 CCTTCCACAGCGGCAAAGGCCACCTATCGTTTTGCA-AAAGATGGAT--TTTGTATCCAA 99 Query 11813 TTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAATAAA 11872 ||| ||||| || || || || || ||| | | ||||| || |||||||| || Sbjct 98 TTTAATGCCCATTCTGCCTTTTTCTTAACGAAAAAAAGAGTTTCAATGGCGTTAAACAAT 39 Query 11873 TGCATTTTTTCTATATTATCTC 11894 |||||||| || ||||| Sbjct 38 ATATTTTTTTCTTGATGATCTC 17 >seq929 Length=218852 Score = 102 bits (112), Expect = 8e-17 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 37138 ACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATG 37197 ||||||||||||||| | | | ||| | ||| || ||||| || |||||||| ||| Sbjct 96189 ACCTGAAAATCTCCACAAATAATTCTGCGAACATAAATGTTGCTTGTGTATGGTTCTATG 96130 Query 37198 GACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGG 37257 || |||||||||| | | ||||||||| |||||||| ||||| || || | || | | Sbjct 96129 GATTCATTATTACCCAGAAGTTGAGATGTGGATGCAGTGGGCATAGGAGCAACTAACAAG 96070 Query 37258 CTATTTCTCAATCCAT 37273 || |||||||| |||| Sbjct 96069 CTGTTTCTCAACCCAT 96054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 467469237051840