Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq6372 123 2e-23 >seq6372 Length=86001 Score = 123 bits (136), Expect = 2e-23 Identities = 173/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 20936 GTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCC 20995 ||||||| ||| | |||| |||||| ||| | || || ||||| |||||| Sbjct 39226 GTGGTTGGCGTACAGGTGGCAGTCACCGCCGGTCCAGATGAACTCGCCCGGCTGCAGGCC 39285 Query 20996 CGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCC 21055 ||| || || | || |||||| |||||||||||||||||||| || || || || Sbjct 39286 GCAGACCTGCGCCACCATCAGCGTCAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACGCC 39345 Query 21056 GAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTA 21115 |||| ||||| || || | |||||| |||||||||||||||| || || ||||| Sbjct 39346 GAGGAAGATGTCCGCCGAGCGCTGGTAGAGCTGGCAGGACAGCTTGCCGTCGGCGACGTA 39405 Query 21116 AAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCA 21175 ||||| ||| | ||||| || || || |||||| || ||| ||| |||||||| Sbjct 39406 GAACTGGAACAGCGCATGACAGGGCGGCAGCGCCATCTGCTCGACCAGCGCCGGGTTCCA 39465 Query 21176 CGC 21178 || Sbjct 39466 GGC 39468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426836336009280