Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= NC_003444.1
Length=37074
Score E
Sequences producing significant alignments: (Bits) Value
seq11269 114 3e-21
>seq11269
Length=54388
Score = 114 bits (126), Expect = 3e-21
Identities = 418/645 (65%), Gaps = 41/645 (6%)
Strand=Plus/Plus
Query 844 TTTGGCTGGGTCAATAAAGGCTCCCGGCTGCGCCGCTTCAGGGAGGTGTATACCGAAATC 903
|||||||||||||| || | | || | |||| | ||| | |||| || || ||
Sbjct 12857 TTTGGCTGGGTCAAGAAGGACACCGGCAAGCGCAGGTTCCGCGAGGCCTACGAAGAGATT 12916
Query 904 CCCCGTAAGAACGGCAAATCGGCAATCTCTGCCGGTGTTGCCCTGTATTGTTTTGCCTGT 963
||| | |||||||| |||||||| | ||| | | | || | || |||
Sbjct 12917 CCCAGGAAGAACGGGAAATCGGCCCGCCTTGCTGCACGAGGTATTTACTTGTTCGCCGCA 12976
Query 964 GATAACGAGTTCGGCGCGGAAGTGTATTCCGGTGCCACGACAGAGAAACAGGCGTGGGAA 1023
||| ||||| || || || || |||||||| ||||| || ||||| ||||||| ||
Sbjct 12977 GATGGCGAGTCGGGAGCCGAGGTCTATTCCGGCGCCACCACCGAGAAGCAGGCGTTCGAG 13036
Query 1024 GTCTTTCGCCCGGCGCGACTGATGTGTAA-ACGC---ACACCCATGCTGACGGAAGCG-T 1078
|| ||||||||||| | ||||| | | | || | | || || || || || |
Sbjct 13037 GTATTTCGCCCGGCTTGGATGATGGCTCACAAGCTGGAGAACC----TG-CGCAACCGGT 13091
Query 1079 TCGGGATTGAGGTTAACGCCTCAAACATGAACCGT----CC-----------GGAGGATG 1123
|||| || ||| || | | | ||||| | || ||||||
Sbjct 13092 TCGGCATCGAGCTTTCTGGAAATCAGAAGAACCCTGGCCCCATGTTCGTCATGGAGGACA 13151
Query 1124 GCGCGCGGTTTGAACCGCTGATCGGCAACCCCGGTGATGGTTCATCACCCCACTGTGCCG 1183
|| ||| || || |||||||||||||||| |||||| | ||||| ||||
Sbjct 13152 TGTCGAAGTTCGAGACGGTGATCGGCAACCCCGGGGATGGTGCGAGTCCCCATGCTGCCC 13211
Query 1184 TGGTTGATGAATATCACGAGCATGCCACCGATGC---GCTTTATACCACAATGCTTACCG 1240
|||| || || || ||||| || | ||| || || | | |||||| ||| || |
Sbjct 13212 TGGTGGACGAGTACCACGAACACGACACAGACGCCTTGGTGGATACCA---TGCAGACAG 13268
Query 1241 GGATGGGGGCGCGACGTCAGCCACTGATGTGGGCCATCACCACCGCCGGGTACAACATTG 1300
| |||||||||||| |||||| || ||| | ||| || || | |||| || | |
Sbjct 13269 GCATGGGGGCGCGAGAACAGCCATTGCTGTCGATCATTACGACGTCGGGGTCAAATCTCG 13328
Query 1301 AGGGGCCGTGCTACGACAAGCGGCGGGAAGTCATCGAGATGCTCAACGGCTCGGTGCCTA 1360
|||||| || ||||| ||||| ||||| || ||| || ||| | || | | | |
Sbjct 13329 GGGGGCCATGTTACGAGAAGCGCCGGGACGTGATCCGCATTCTCGAGGG---GCAGACGA 13385
Query 1361 ACGATGA-AC--TGTTCGGGATCATCTATACCGTTGATGAAGGTGACGACTGGACCGACC 1417
|||||| || | |||||||||||||| || | || || | ||| ||| ||||
Sbjct 13386 TCGATGAGACGATCTTCGGGATCATCTACACGATCGACGAGGATGATTCGTGGGATGACC 13445
Query 1418 CG--CAGGTGCTGGAAAAAGCCAATCCAAATATTGGCGTGTCGGT 1460
|| ||| ||| || |||||||| ||| || ||||||||
Sbjct 13446 CGGCCAG--CCTGATCAAGGCCAATCCGAATTACGGAGTGTCGGT 13488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 118261541621152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |