Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_003444.1 Length=37074 Score E Sequences producing significant alignments: (Bits) Value seq11269 114 3e-21 >seq11269 Length=54388 Score = 114 bits (126), Expect = 3e-21 Identities = 418/645 (65%), Gaps = 41/645 (6%) Strand=Plus/Plus Query 844 TTTGGCTGGGTCAATAAAGGCTCCCGGCTGCGCCGCTTCAGGGAGGTGTATACCGAAATC 903 |||||||||||||| || | | || | |||| | ||| | |||| || || || Sbjct 12857 TTTGGCTGGGTCAAGAAGGACACCGGCAAGCGCAGGTTCCGCGAGGCCTACGAAGAGATT 12916 Query 904 CCCCGTAAGAACGGCAAATCGGCAATCTCTGCCGGTGTTGCCCTGTATTGTTTTGCCTGT 963 ||| | |||||||| |||||||| | ||| | | | || | || ||| Sbjct 12917 CCCAGGAAGAACGGGAAATCGGCCCGCCTTGCTGCACGAGGTATTTACTTGTTCGCCGCA 12976 Query 964 GATAACGAGTTCGGCGCGGAAGTGTATTCCGGTGCCACGACAGAGAAACAGGCGTGGGAA 1023 ||| ||||| || || || || |||||||| ||||| || ||||| ||||||| || Sbjct 12977 GATGGCGAGTCGGGAGCCGAGGTCTATTCCGGCGCCACCACCGAGAAGCAGGCGTTCGAG 13036 Query 1024 GTCTTTCGCCCGGCGCGACTGATGTGTAA-ACGC---ACACCCATGCTGACGGAAGCG-T 1078 || ||||||||||| | ||||| | | | || | | || || || || || | Sbjct 13037 GTATTTCGCCCGGCTTGGATGATGGCTCACAAGCTGGAGAACC----TG-CGCAACCGGT 13091 Query 1079 TCGGGATTGAGGTTAACGCCTCAAACATGAACCGT----CC-----------GGAGGATG 1123 |||| || ||| || | | | ||||| | || |||||| Sbjct 13092 TCGGCATCGAGCTTTCTGGAAATCAGAAGAACCCTGGCCCCATGTTCGTCATGGAGGACA 13151 Query 1124 GCGCGCGGTTTGAACCGCTGATCGGCAACCCCGGTGATGGTTCATCACCCCACTGTGCCG 1183 || ||| || || |||||||||||||||| |||||| | ||||| |||| Sbjct 13152 TGTCGAAGTTCGAGACGGTGATCGGCAACCCCGGGGATGGTGCGAGTCCCCATGCTGCCC 13211 Query 1184 TGGTTGATGAATATCACGAGCATGCCACCGATGC---GCTTTATACCACAATGCTTACCG 1240 |||| || || || ||||| || | ||| || || | | |||||| ||| || | Sbjct 13212 TGGTGGACGAGTACCACGAACACGACACAGACGCCTTGGTGGATACCA---TGCAGACAG 13268 Query 1241 GGATGGGGGCGCGACGTCAGCCACTGATGTGGGCCATCACCACCGCCGGGTACAACATTG 1300 | |||||||||||| |||||| || ||| | ||| || || | |||| || | | Sbjct 13269 GCATGGGGGCGCGAGAACAGCCATTGCTGTCGATCATTACGACGTCGGGGTCAAATCTCG 13328 Query 1301 AGGGGCCGTGCTACGACAAGCGGCGGGAAGTCATCGAGATGCTCAACGGCTCGGTGCCTA 1360 |||||| || ||||| ||||| ||||| || ||| || ||| | || | | | | Sbjct 13329 GGGGGCCATGTTACGAGAAGCGCCGGGACGTGATCCGCATTCTCGAGGG---GCAGACGA 13385 Query 1361 ACGATGA-AC--TGTTCGGGATCATCTATACCGTTGATGAAGGTGACGACTGGACCGACC 1417 |||||| || | |||||||||||||| || | || || | ||| ||| |||| Sbjct 13386 TCGATGAGACGATCTTCGGGATCATCTACACGATCGACGAGGATGATTCGTGGGATGACC 13445 Query 1418 CG--CAGGTGCTGGAAAAAGCCAATCCAAATATTGGCGTGTCGGT 1460 || ||| ||| || |||||||| ||| || |||||||| Sbjct 13446 CGGCCAG--CCTGATCAAGGCCAATCCGAATTACGGAGTGTCGGT 13488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118261541621152