Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq18050 111 1e-19 seq77092 98.7 7e-16 seq76486 98.7 7e-16 >seq18050 Length=32055 Score = 111 bits (122), Expect = 1e-19 Identities = 124/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 22728 GTCTATCGCAACACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTC 22787 |||| | ||| ||| || |||||||||| ||||| ||||| || | || || || || Sbjct 12035 GTCTTTTCCAAAACGGCTGGTGGCCTTTGCCGCTGTGGAAGGAATCCTTTTCTCAGGTTC 11976 Query 22788 ATTTGCGGCCATATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAA 22847 ||||||||||| || ||| | |||||||| | ||||| | || ||||| ||| Sbjct 11975 CTTTGCGGCCATTTTTTGGTTAAAGAAACGGGGATTAATGCCTTGATTAACGTTTAGCAA 11916 Query 22848 CGAGTTGATTAGCCGTGACGAAGGTCTACACTGTGACTTTGCTTGT 22893 |||||||||||| || || ||||| |||||||| || ||| | ||| Sbjct 11915 CGAGTTGATTAGTCGAGATGAAGGGCTACACTGCGATTTTTCCTGT 11870 >seq77092 Length=4929 Score = 98.7 bits (108), Expect = 7e-16 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 |||||||||| ||||| ||||| || | || || | | ||||||||||| || || Sbjct 134 TGGCCTTTGCCGCTGTGGAAGGAATCTTTTTCTCATGTTGCTTTGCGGCCATTTTTCGGT 193 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 | |||||||| | ||||| || || ||||| |||||| |||||||| || || | Sbjct 194 TAAAGAAACGGGGATTAATGCCTGGATTAACGTTTAGCAACGAATTGATTAGTCGAGATG 253 Query 22868 AAGGTCTACACTGTGACTTTGC 22889 |||| ||||||||||| ||||| Sbjct 254 AAGGACTACACTGTGATTTTGC 275 >seq76486 Length=4962 Score = 98.7 bits (108), Expect = 7e-16 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 |||||||| ||||| ||||| || | || ||||| || ||||||||||| || ||| | Sbjct 98 GCCTTTGCCGCTGTGGAAGGAATCTTTTTCTCTGGTTCCTTTGCGGCCATTTTTTGGTTA 157 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 |||||||| | ||||| || || ||||| ||||||||||||||| || || ||| Sbjct 158 AAGAAACGGGGATTAATGCCTGGATTAACGTTTAGCAACGAGTTGATTAGTCGAGATGAA 217 Query 22870 GGTCTACAC 22878 || ||||| Sbjct 218 GGATTACAC 226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355451087923108