Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq4663 251 7e-62 seq18050 217 1e-51 seq38288 196 5e-45 seq77092 122 8e-23 seq5663 104 2e-17 seq84794 98.7 9e-16 seq27548 98.7 9e-16 >seq4663 Length=104512 Score = 251 bits (278), Expect = 7e-62 Identities = 585/871 (67%), Gaps = 22/871 (3%) Strand=Plus/Plus Query 13385 CTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCGAATG 13444 |||| | ||||| |||||||| |||||| | | ||||||||||||||||||||||| | Sbjct 34247 CTCTCCTATCAAAGAAGTTAGTCTTACCTACTAAAGATATATTTTCCATAAAATCGAAAG 34306 Query 13445 GATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAA-TAATCTATCAGCAATA 13503 | || | || || | ||| || | || | | |||||| ||||| ||||| ||| Sbjct 34307 GGTTGGCTGTGTTATAATATTTCTCCAATCCCAAAT-TAATAAGCAATCTGTCAGCCATA 34365 Query 13504 AACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATA 13563 || |||||||| | | ||||||| | ||||||||| |||| || ||||| || | | Sbjct 34366 AATTCAATATACTCACACATTAATTTACAATTCATTTCTATAAGATTTACTGGTAAGCTT 34425 Query 13564 TTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCTTAATAATGTCA 13623 | ||||||||| || |||||| |||| || | ||| || | | |||| Sbjct 34426 ACACTTAAAAATTATTGTTCTATGATGACAGATTC---TTTAACTATATCGAGTATGT-- 34480 Query 13624 TTAGAAGGAGGATATT---TTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGG 13680 |||||| | | ||| || ||| || ||| ||||||||||| ||||| Sbjct 34481 ----AAGGAGACTTGTTAATTAAATATTTGTTAAGGTGACATGCAAAATCACAGTGAAGT 34536 Query 13681 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13740 || |||||||| ||||||||||| || | || |||| | ||||||| ||| || || Sbjct 34537 CCTTCATCTCTGCTAATAAGTTCATTGGCGAAGGTTAGGACAGGCATCAGTCCACGATTC 34596 Query 13741 tttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 13800 || ||||| || |||| ||| |||| || |||||||||||||| || || |||||| Sbjct 34597 TTCAACCAGAAGATTGAAGCAAATGCACCCGAAAAGAATATTCCTTCTACACAAGCAAAT 34656 Query 13801 GCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCA 13860 |||| || || ||| | | || || | ||||||||| |||||| ||| Sbjct 34657 GCTACTACACGAGTGGTAAATTA-GATTCCGGGTATTGTATCCATTTCAAAGCCCAGTCA 34715 Query 13861 GAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTA 13920 | ||| || ||||| | ||||| || |||| | |||||| ||||| | Sbjct 34716 GCTTTCTTCTTAATGCATGGTATTGTGGTAATAACATTAAGCAAATGTGTCTTCTGATCC 34775 Query 13921 GTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATA 13980 | | ||| || | ||| || |||| |||||| || | || || || ||||| Sbjct 34776 TGATCAGTAATATAAGCATCTATTAGTAGAGAATACATCTCGGTATGGATATTCTCTATT 34835 Query 13981 GCTATCTGAAAACCATAAAAACATCTAGCTTCT-GACCATTGTACCTCCGAGTA--AAAT 14037 |||| || || |||||||| ||| | |||| | | || | || || |||| |||| Sbjct 34836 GCTACTTGGAATCCATAAAAGCATTTTGCTTTTAGTACAAT-CACTTC--AGTAATAAAT 34892 Query 14038 CTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGC-AAAAAATGCCAATATGTT 14096 |||||| | | | | |||| ||||| ||||| | || |||||| || | ||||| Sbjct 34893 CTTTCTACAAGATCTGCATTCACAATTCCATCTGATGAAGCAAAAAAAAGCAAGGATGTT 34952 Query 14097 TTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAG 14156 | |||||| ||| ||| | || | || | |||||| | ||| || || Sbjct 34953 TGAAATAAAATATCTCTCGTTATCAGTCAGAGTAGACCAATCATGTCTATCAGCTGATAG 35012 Query 14157 ATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTC 14216 ||| ||||| ||||||||||| || | |||| ||||||||||| |||||| || Sbjct 35013 ATCAACTTCTTCAACTGTCCAGAATGAACTCTCAGCCTTTTTATACATCTGCCATATATC 35072 Query 14217 TTTATATAATATAGGAAAAACTACAAATCTT 14247 | || |||||||| | || ||||| Sbjct 35073 ATGGTACCTGATAGGAAAGAGAACGTATCTT 35103 >seq18050 Length=32055 Score = 217 bits (240), Expect = 1e-51 Identities = 506/749 (68%), Gaps = 22/749 (3%) Strand=Plus/Plus Query 13345 TCTTTGTTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTA 13404 |||||||| || || || ||| || ||||| | || | ||||| |||| | || Sbjct 11552 TCTTTGTTGGACATGACTTGGCATTTCTGGTATTCCCCGACACGTTTTTAAAAACAATTG 11611 Query 13405 GTTTTACCTTCCAGTGATATATTTTCCATAAAA-TCGAATGGATTTGTTGACA-TAAACA 13462 ||||| ||||||| ||| ||||| |||| || || || ||| | ||| || | | Sbjct 11612 GTTTTTCCTTCCAAACTAATACATTCCAAAAAAATCAAAAGGGTTT-TCCACAATATAAA 11670 Query 13463 CTTTATCACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACA 13522 ||||||||| || | ||| | ||||||| || || | ||| ||||||||||| | Sbjct 11671 TTTTATCACACCCCAATTCCCACAATAATCGGTCTGCCACAAATTCAATATATTGCTTTA 11730 Query 13523 TTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTT 13582 | || ||||||||| || || || ||| || | | | ||||||||||||| | Sbjct 11731 TCAATGTACAATTCATGCCAATGAGGGATACTGGTAATGCCTCGGTTAAAAATTCTTGCT 11790 Query 13583 CTATAGACACAGCCTCGTTTATAATAATCTTAA--TAATGTCATTAGAAGGAGGATATTT 13640 | || | || || | |||||| | || ||||| ||||| | | ||| Sbjct 11791 CAATCGTTACGGCATACGATATAATTTGCACAATTTAATG--CTTAGATGATTTGTTTTT 11848 Query 13641 TA---GATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAAT 13697 || ||| || || | ||| | |||||| || || || || ||||||| |||||| Sbjct 11849 TACGTAATGATTGAACAAGTGACAGGAAAAATCGCAGTGTAGCCCTTCATCTCGACTAAT 11908 Query 13698 AAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGC 13757 | ||||| ||| ||||||| ||||| ||||| ||||| ||||||||||| || || Sbjct 11909 CAACTCGTTGCTAAACGTTAATCAAGGCATTAATCCCCGTTTCTTTAACCAAAAAATGGC 11968 Query 13758 AGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCC 13817 || || || || || || | ||||| || || || ||||| || | || |||| | Sbjct 11969 CGCAAAGGAACCTGAGAAAAGGATTCCTTCCACAGCGGCAAAGGCCACCAGCCGTTTTGG 12028 Query 13818 AAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAA 13877 ||| || | |||| |||||| ||| | |||||| | ||||| |||| | Sbjct 12029 AAAAGACG------GGTTTTGTATCCAATTTAATGACCATTCTGCCTTTTTCTTAACGCA 12082 Query 13878 ATCCATTGTTTCGATTGCATTGAATAAATGT-TCCTTCTCTTTAGTACTTGAAATGTATG 13936 | ||||| || || || || ||||| | || |||| | | | || | | Sbjct 12083 GGAAAGGGTTTCAATGGCGTT-AAACAATGTATTTTTTTCTTGATGATCTCGAACGAGGG 12141 Query 13937 TATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCAT 13996 | ||||| | ||||| |||||||| || || || ||||| || || |||||||| ||| Sbjct 12142 TCTCAATCAACAAGCTGTACATTTCTGAATGAATATTTTCAATGGCAATCTGAAAGTCAT 12201 Query 13997 AAAAACATCTAGCTTCTGACCA-TTGTACCTC-CGAGTAAAATCTTTCTGCCAAGTTTTC 14054 |||| || | ||| || || || || ||| || |||| ||| | ||| | || ||||| Sbjct 12202 AAAAGCAACGAGCCTC-GATCACTTTTACTTCACGAG-CAAAGCGTTCCACTAAATTTTC 12259 Query 14055 ATTAACAATACCATCACTAGCTGCAAAAA 14083 ||| |||||||| ||||| || ||||||| Sbjct 12260 ATTTACAATACCTTCACTGGCGGCAAAAA 12288 >seq38288 Length=11396 Score = 196 bits (216), Expect = 5e-45 Identities = 375/549 (68%), Gaps = 14/549 (3%) Strand=Plus/Plus Query 13659 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13718 ||| |||||||| || || || || ||||||| ||| || | | ||| ||| ||||| Sbjct 7670 ACAGGCAAAATCCCAGTGTAGTCCTTCATCTCGACTCATCAACTTGTTGCTAAACGTTAA 7729 Query 13719 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAA 13778 ||| ||||| ||| | ||||| ||||||||||| || || | || || || || || || Sbjct 7730 TCCAGGCATTAATTCCCGTTTCTTTAACCAAAAAATAGCCGAAAAGGAACCTGAGAAAAA 7789 Query 13779 TATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGA 13838 ||||| || || || ||||| || | | |||| | |||| |||| |||| Sbjct 7790 GATTCCTTCCACAGCGGCAAAGGCCACCAACCGTTTTGCAAAAGATGGATTTTG------ 7843 Query 13839 TATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATT 13898 |||||| ||| |||||||| | ||||| |||| | | ||||| || || || Sbjct 7844 TATCCAATTTAATGCCCATTCTGCCTTTTTCTTAAAGCAGGAAAGGGTTTCAATGGCGTT 7903 Query 13899 GAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACAT 13958 || || | | || |||| | | | ||||| | ||||| || ||||| ||||| Sbjct 7904 AAACAATTTATTTTTTTCTTGATGATCTCAAATGAGGATCTCAATCAGCAAGCTGTACAT 7963 Query 13959 TTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCA 14018 ||| || ||||| ||||| || || |||||||| |||||||| || | | |||| | | Sbjct 7964 TTCTGAATGTATATTTTCAATGGCAATCTGAAAGCCATAAAAGCAACGAACTTCGGTCAC 8023 Query 14019 TTGTACCTC-CGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTG 14077 || || || |||| || | ||| | || |||||| | |||||||||||||| || | Sbjct 8024 TTTGACTTCGCGAGCGAAG-CGTTCCACTAAATTTTCAATTACAATACCATCACTGGCGG 8082 Query 14078 CAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCAT---TGTTGAGTTTTTTCC 14134 ||||||| |||| | | || || | ||| || || | | | | ||| || Sbjct 8083 CAAAAAAGGCCAGAACATGGGAAAGAA---AATGCCATTTATCGGGGGTTAATCTTTCCC 8139 Query 14135 AATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTT 14194 |||| | ||| || || | ||| ||||| || | ||||| || ||||||||| | Sbjct 8140 AATCTCCCCCATCTTTGGACAAATCCACTTCTTCTGCCGTCCAGAAGGAAGCGACAGCCT 8199 Query 14195 TTTTATACA 14203 |||| |||| Sbjct 8200 TTTTGTACA 8208 >seq77092 Length=4929 Score = 122 bits (134), Expect = 8e-23 Identities = 172/242 (71%), Gaps = 6/242 (2%) Strand=Plus/Minus Query 13663 GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCT 13722 ||||||||||| || || || ||||||| |||||| | |||||| ||| |||||||| Sbjct 275 GCAAAATCACAGTGTAGTCCTTCATCTCGACTAATCAATTCGTTGCTAAACGTTAATCCA 216 Query 13723 GGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATT 13782 ||||| ||||| ||||| ||||||| ||| || || || || | | || || || ||| Sbjct 215 GGCATTAATCCCCGTTTCTTTAACCGAAAAATGGCCGCAAAGCAACATGAGAAAAAGATT 156 Query 13783 CCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATC 13842 || || || || ||||| || | ||||| | |||| |||| |||| |||| Sbjct 155 CCTTCCACAGCGGCAAAGGCCACCTATCGTTTTGCAAAAGATGGATTTT------GTATC 102 Query 13843 CATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAAT 13902 || ||| |||||||| | ||||| |||| ||| | ||||| || || || || Sbjct 101 CAATTTAATGCCCATTCTGCCTTTTTCTTAACGAAAAAAAGAGTTTCAATGGCGTTAAAC 42 Query 13903 AA 13904 || Sbjct 41 AA 40 >seq5663 Length=92856 Score = 104 bits (114), Expect = 2e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 |||||||||| || || || || || ||||| || || |||||||| |||| || | Sbjct 79466 CCTCATCTCTGCTTATTAGCTCATTGCTGAATGTCAAACCAGGCATCAAACCTCTCTTCT 79407 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 | ||||| || || | ||| || || || || ||||||||||| |||||||||||||| | Sbjct 79406 TCAACCAGAAAATAGAAGCAAAAGAGCCAGAGAAGAATATTCCTTCAACTGCAGCAAATG 79347 Query 13802 CTATTAGTCGTTCTCCAAACGATGC 13826 | | || ||| || ||||| || || Sbjct 79346 CAACTACTCGCTCACCAAAGGAAGC 79322 Score = 98.7 bits (108), Expect = 9e-16 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 13306 AAAAACTAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGTTAGAAATAACGCCC 13365 || ||||||||||| |||| || | ||| || ||| ||||| || || ||||| || Sbjct 86213 AAGAACTAAAAATCTGCATCCAAGGTAAAGCAATGATCTTCTTTCTTTGACATAACTCCG 86154 Query 13366 ATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATA 13425 ||||||||||||| ||| | ||||| || || || ||||| ||||| || |||| Sbjct 86153 CACTTTTGATATTCACCAACCTTCTTTTCGAAGAAATTTGTTTTTCCTTCAAGACTTATA 86094 Query 13426 TTTTCCATAAAATCGAATGGATTT 13449 | ||||||||||| || |||||| Sbjct 86093 TGCTCCATAAAATCAAAGGGATTT 86070 Score = 89.7 bits (98), Expect = 5e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 14045 CCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14104 ||||||||||||| ||||| |||||||| || |||||||| || || || | |||| Sbjct 71994 CCAAGTTTTCATTCACAATGCCATCACTGGCAGCAAAAAAGGCTAAAATATGGGAGATAA 71935 Query 14105 AGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTT 14164 | | | ||||| || | ||||| |||||| | ||| || || | || |||| Sbjct 71934 AATGCTTTTCTTCCGGTTTTAATTTTTCCCAATCTATCAGATCTTTTGATAAGTCAACTT 71875 Query 14165 CATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATA 14224 | ||| | |||||||| || ||||||| || |||||| ||| || || | ||| Sbjct 71874 CTTCAGCAGTCCAAAATGATGCTTCAGCTTTCTTGTACATTTGCCAGATGTCCTGATACT 71815 Query 14225 ATATAGGAAAAACTACAAATCT 14246 |||||||| | ||||| || Sbjct 71814 CAATAGGAAATATGACAAACCT 71793 >seq84794 Length=3643 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 13313 AAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGTTAGAAATAACGCCCATTTTTT 13372 ||||||| |||| | | |||| | || |||||||| | || || || ||| | Sbjct 3431 AAAAATCTTCATCCAGTTTAAAAGAACGATTTTCTTTGTTGAACATGACTCCACATTTCT 3372 Query 13373 GATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCCA 13432 | ||||| | ||| | |||||||||||| | ||||| ||||||| ||| ||||| Sbjct 3371 GTTATTCTCCAACACGTTTTTCAAAAAAACTGGTTTTTCCTTCCAAACTAATACATTCCA 3312 Query 13433 TAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAATAAT 13491 ||||||| || || ||| | || | | | | ||||||||| || ||||| | |||||| Sbjct 3311 TAAAATCAAAAGGGTTT-TCCACGTTATAAATTTTATCACATCCCAGTTCCCACAATAAT 3253 Query 13492 CTATCAGCAATAAACTCAATATATTG 13517 | || || | ||| ||||||||||| Sbjct 3252 CGGTCTGCCACAAATTCAATATATTG 3227 >seq27548 Length=17515 Score = 98.7 bits (108), Expect = 9e-16 Identities = 165/236 (70%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 13313 AAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGTTAGAAATAACGCCCATTTTTT 13372 ||||||| |||| | || ||| | || || |||||||| || || || || ||| | Sbjct 249 AAAAATCCTCATCCAGTGTAAACATATGATTTTCTTTGTTGGACATGACTCCACATTTCT 190 Query 13373 GATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCCA 13432 | | ||| | || | ||| | |||||| || ||||| ||||||| ||| ||||| Sbjct 189 GGTGTTCTCCGACACGTTTCTTAAAAAAATTGGTTTTTCCTTCCAAACTAATACATTCCA 130 Query 13433 TAAAATCGAATGGATTTGTTGAC-ATAAACACTTTATCACAACCTAGTTCTAATAATAAT 13491 ||||||| || || ||| | || || | | ||||||||| || | ||| | |||||| Sbjct 129 TAAAATCAAAAGGGTTT-TCCACGTTATAAATTTTATCACATCCCAATTCCCACAATAAT 71 Query 13492 CTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13547 | || || | ||| |||||||||| ||| || ||||||||| || || || Sbjct 70 CGGTCTGCCACAAATTCAATATATTTCTTCATCAATGTACAATTCATGCCAATCAG 15 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477510563363040