Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_004665.1 Length=37359 Score E Sequences producing significant alignments: (Bits) Value seq34826 152 1e-32 >seq34826 Length=13225 Score = 152 bits (168), Expect = 1e-32 Identities = 238/333 (71%), Gaps = 13/333 (4%) Strand=Plus/Minus Query 7553 AGCC-TATCAGGGCGAGCTGCCTTTCTTCGAGAACGAGGATGGCACCGTCACCTTCAAGT 7611 |||| ||||| ||||| ||||| ||| |||| |||| || ||||| || |||||||||| Sbjct 8649 AGCCGTATCAAGGCGACCTGCCCTTCATCGACAACGGTGACGGCACGGTGACCTTCAAGT 8590 Query 7612 TCAGCGGCTATGCCTCGTACAAGGACCAGAAGACTGGCGAGA--ACCGCGACATCGTTCT 7669 || ||||| ||| ||| || | ||| ||||||| | | ||| || || Sbjct 8589 TCGTCGGCTGGGCCAGCTACGAGAAG-----GAC-GGCGAGATGATCCCGA--TCCCCCT 8538 Query 7670 GCGTGTCGTTGACGCCAAGGGCAAGCGCATCGAAGCCGTTCCTGCCATCGCTGGCGGTTC 7729 ||||||||||||||||||||||||| ||||| | || || |||| | || || || Sbjct 8537 GCGTGTCGTTGACGCCAAGGGCAAGGCCATCGCTGATGTCCCGAACATCTCGGGTGGCTC 8478 Query 7730 CAAGCTGAAGGTCCGCTTCTCGATCTTCCCGTACACCTTCGGTGCCG-TTGTTGGTGCCA 7788 | || |||||||||||||| ||| |||| ||| | | | ||| || || ||| Sbjct 8477 CGAGGGCAAGGTCCGCTTCTCCATCGTCCCCTACGGC-TGGAACCCGACCGTGGGCGCCT 8419 Query 7789 GCGTGAAACTGCAACTGGACAGCGTGATGCTGATCGAGCTGCGTGAGTTCGCTGCTGGTG 7848 |||||| || |||||||| || | ||||||| | | ||| |||| | || |||| Sbjct 8418 CCGTGAAGCTCCAACTGGAAGGCTTCATGCTGACCAAACTGGTCGAGTCAGATGATGGTC 8359 Query 7849 GTGACGACTGGGCTGGTCAGGAAGAAGAAGGCT 7881 |||||||||| || |||||||| || |||| Sbjct 8358 AAGACGACTGGGGCGGCCAGGAAGAGGACGGCT 8326 Score = 125 bits (138), Expect = 2e-24 Identities = 183/255 (72%), Gaps = 8/255 (3%) Strand=Plus/Minus Query 27523 ggggTCCCCTATGAGTACCTGCACAAGAAGATTTTCATCGAGTCCAGCTTCAACCCTGAC 27582 |||||||| || || |||||||||| | | |||| || ||| ||||||||| | Sbjct 8080 GGGGTCCCTTACGACCTCCTGCACAAGCAACTCTTCAAGGAATCCTCGTTCAACCCTAAA 8021 Query 27583 GCCAAGTCGCCAACCGGGCCTCTGGGTCTGGGCCAGTTCACCAAGGCGACCGGCAAGGCT 27642 ||| | || || ||||||| ||| | || |||||||||||||| || || || || Sbjct 8020 GCCGTGAGCCCTACGGGGCCTCGCGGTATCGGGCAGTTCACCAAGGCCACTGGGAAAGCC 7961 Query 27643 TACGGGCTGATGACCGATGAGGATCGTCTG-GACCCAATCAAGTCCATCAACGCTTCCGC 27701 ||||| ||||| ||||| ||||| | ||| ||||| |||||||||| |||| |||| Sbjct 7960 TACGGCCTGATCACCGAGGAGGA-CTTCTTCGACCCCGCCAAGTCCATCGACGCAGCCGC 7902 Query 27702 TCAGTACACCCGTGAC---CTCATGGGCACCTACAAGGGCGACATGCTGAAGGTGGCATT 27758 || | ||| || ||| |||| || | | ||| |||||| |||||||| | | Sbjct 7901 TCGGCACATGCGCGACAACCTCAAGG---CGTCCAACGGCGACGAGCTGAAGGCGCTCCT 7845 Query 27759 GGCCTACAACCAAGG 27773 | ||||||||||| Sbjct 7844 GATGTACAACCAAGG 7830 Score = 111 bits (122), Expect = 4e-20 Identities = 487/758 (64%), Gaps = 46/758 (6%) Strand=Plus/Minus Query 29959 GAGAACAACAACTTCCTCGAAGCCCGTAACCTGTTCGACTCGGACGTGTCGGTGCCTCTG 30018 ||||||||| ||| ||||||||| |||||||| |||||||| || ||||| | | | | Sbjct 5818 GAGAACAACGACTACCTCGAAGCTCGTAACCTCTTCGACTCCGATATGTCGAT--CACCG 5761 Query 30019 AGC--GATGGCTCGTCGTTCTCGGTCAATGACCTGCGCATGTATGACTTCACCAAGCT-- 30074 || || ||| | ||||| | || |||||||| || ||||||| | ||| Sbjct 5760 CGCCTGACGGCCAGCCGTTCGCTGTGAATGACCTCCGA------GACTTCAACCTGCTTC 5707 Query 30075 ----GATGCCATCCTATGACCGCCGTATCAACGGTGACGTGGGGATCATGGCTGCGACTG 30130 | | || || |||||| | ||||||||||| | | |||||| || || | Sbjct 5706 GGGTGGTCCCGCAGTACGACCGCAGGGTCAACGGTGACATCGCCCTCATGGGTGGCACCG 5647 Query 30131 GTGAAGG-CACCGATGCGCTCAAGGC--TCGTATCCTGAA---GCTCAAGA-CCACCAAG 30183 | ||||| |||| | || ||| | || | ||| || ||| || || | Sbjct 5646 G-GAAGGACACCCGGACCCTGAAGAACATGGTCAACGGAATGCGCCAAAGGTCCGCCCAC 5588 Query 30184 GGCAACAGCTCTGACGTGGAGGC------CCTTGAGTCTGCCGTTAAGCTGCTCACTGGT 30237 ||| | | || || |||||| ||| | ||| | ||| ||||||| || Sbjct 5587 GGCGAGGACGCT--CG-GGAGGCTGAATACCTCATGGACGCCCTGAAGATGCTCACCGGA 5531 Query 30238 CGCGCTCGTCGTAACCCAGATGACGCCTTTGGGACTGCTCTGCGATCCCTCAACGACCTG 30297 |||||||| || | || || | | ||| | ||| | ||||||| | |||||| | Sbjct 5530 CGCGCTCGGCGCGATCCTGACGGCACCTGGGCGACCGTAGCGCGATCCTTGAACGACATC 5471 Query 30298 TCCTTCTTCACCAAGAACGCCTACATGGGCGTGCAGAACTTCACCGAGATCG---CCGGG 30354 || ||| |||||||||||||||||||| |||||| |||||||| || || | Sbjct 5470 GGGTTTGCCACGAAGAACGCCTACATGGGCGTACAGAACATCACCGAGGCCGCGTCCCTG 5411 Query 30355 ATGGTGACCAATGGGCATCTTCGGATGCTGATGCACGGTGTGCCTTACCTGCGTGAGATG 30414 || || ||| || || | |||||| || | || | || || || | Sbjct 5410 ATCGT---CAAGGGCCACCAGAAGATGCTCCTGAAGGGCATCCCGATGCTCAAGAAGTGG 5354 Query 30415 ACCACTTGGGGAACCAAGATCAAACCAGAGCAGCTCAAGGAGATGCACAACCTGATCTTC 30474 |||| || || ||| | | | || | |||||||||||||| |||||||||| Sbjct 5353 TCCACGGCAGGGACAAAGCTGGAGCTGGACGACATCAAGGAGATGCACGGCCTGATCTTC 5294 Query 30475 GGGCGTGAACTGGATGACACCATCCGGCCTCGTCGAGCTGACATCGTGGACCGCTTGCG- 30533 || || ||||| |||| ||| ||||| || |||||||||||| | | || Sbjct 5293 GGCAAGGAGCTGGACGACATCATTCGGCCCACCCGGCAGGACATCGTGGACAACCTCCGT 5234 Query 30534 GACTC-AAGGATCGAACAACTTCGTTGCCCAGACCGTAGGCTCTGCAAAGTTCGCCACTC 30592 ||| || || | | | ||| |||| || ||| || |||||||||||| Sbjct 5233 CGCTCGGAGAATGGGGCCGCCTCG-----CAGATCGCAGGGTCCCTCAAGTTCGCCACTG 5179 Query 30593 AGGAACTGGCCGCTCGCAGTCCGTTCACCAAGCTGCTTACTGAGACTTCCAACTACATCG 30652 || | |||||||| |||||||| ||| || |||| | |||||||||| Sbjct 5178 GTGAGATCGCCGCTCGGTCCCCGTTCACTTGGCTCCTCCGTGAGTCAGGCAACTACATCA 5119 Query 30653 CTGACGCTGGTCGTCAAGGTGCTCTGATGGACATGATC 30690 ||||| || || ||||| || ||| | ||| | ||| Sbjct 5118 TGGACGCGGGCCGCCAAGGGGCGCTGGTTGACCTCATC 5081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119171589665272