Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_004681.1 Length=75931 Score E Sequences producing significant alignments: (Bits) Value seq4 369 2e-97 seq14 208 4e-49 seq22220 113 2e-20 seq43338 86.0 3e-12 >seq4 Length=924746 Score = 369 bits (408), Expect = 2e-97 Identities = 635/917 (69%), Gaps = 15/917 (2%) Strand=Plus/Plus Query 66608 GCCCTGGCCGAGGTCGATAAACGCTTCGGCGCCGGATCGGCTATGAAGCTGGGTGACAAG 66667 || |||||| || |||| |||| |||||| || |||| ||| || || ||| || Sbjct 25877 GCGCTGGCCCAGATCGAGAAACAGTTCGGCAAGGGCTCGGTCATGCGCCTCGGCGACCAG 25936 Query 66668 CCACAGACTGTGGACGTC------ATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTG 66721 || | || | | | || ||| |||| ||||| | | |||||| ||| ||| Sbjct 25937 CCTGACACGGGCGCCATCCCGGCCATTTCCACAGGCTCGCTGGGGCTGGACATCGCCCTG 25996 Query 66722 GGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGG 66781 |||||||| || || | |||||| | || || ||||||||||| || || || || Sbjct 25997 GGCATCGGCGGCCTGCCCAAGGGCCGCATCGTCGAGATCTACGGCCCCGAGTCCTCGGGC 26056 Query 66782 AAGTCAACTCTGTGTCTCCACGCGGTGGCCAA-TGCGCAGAAGGCCGGTGGCAACGCCGC 66840 ||| | || ||| || || | | ||| ||| ||| |||||||||| ||||| Sbjct 26057 AAGACCACGCTGACCCTGCAGGTCATCGCCGCCTGC-CAGCGCGCCGGTGGCACGGCCGC 26115 Query 66841 CTACATCGACGCTGAGCACTCCCTGGACCCCGAGTACGCCAAGGC--GCTCGGTGTGGAC 66898 || | ||||||| ||||| | ||||| || |||||| ||| |||||| || | Sbjct 26116 CTTCGTCGACGCCGAGCATGCGCTGGATCCGCTCTACGCC--GGCAAGCTCGGCGTCAAT 26173 Query 66899 CTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGAC 66958 |||| |||| ||||| ||||||||||| ||||||||||| ||||| ||| ||| Sbjct 26174 GTCGAGGACCTGCTGGTGTCGCAGCCGGACACCGGCGAGCAGGCGCTGGAAATCACCGAC 26233 Query 66959 CTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTG 67018 | || || || |||| | | |||| |||| || ||||| || || || || | Sbjct 26234 ATGCTGGTGCGCTCGGGCGCGGTCGACATCATCGTTGTCGACTCCGTCGCCGCGCTCACG 26293 Query 67019 CCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTC 67078 ||||||||||| |||| || || || || |||| ||||||||||| || || |||||| Sbjct 26294 CCGCGCGCCGAAATCGAGGGTGAAATGGGCGACATGCACGTCGGCCTCCAGGCTCGCCTC 26353 Query 67079 ATGTCGCAGGCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTC 67138 ||||||||||| |||||||| |||| |||| |||| | ||||| ||| || Sbjct 26354 ATGTCGCAGGCGCTGCGCAAGATCACCGGCAACATCAAGCGTTCCAACTGCCTGGTCATC 26413 Query 67139 TGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACC 67198 | |||||||| | ||| |||||||||| | || | | |||| || |||||| Sbjct 26414 TTCATCAACCAGATCCGCATGAAGATCGGCGTCATGTTCGGCAACCCG---GAAACCACC 26470 Query 67199 ACGGGCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCC 67258 || ||||| || || | | |||||||||||| || ||| | || |||| ||||||| | Sbjct 26471 ACCGGCGGCAACGCGCTCAAGTTCTACGCCTCGGTGCGCCTCGACATCCGACGCATCGGC 26530 Query 67259 ACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAAC 67318 | | ||||||||||| || | ||||| ||||| || || || ||||||||| Sbjct 26531 GCGGTCAAGGAAGGCGAAGAAGTGGTCGGTTCGGAAACCCGCGTCAAGGTGGTCAAGAAC 26590 Query 67319 AAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCG 67378 ||| || | |||||| | | | ||||||||| || | ||||| |||||||| Sbjct 26591 AAGGTGTCGCCGCCGTTCAGGGAGGCCGAGTTCCAGATCCTCTACGGCCAGGGCATCAAC 26650 Query 67379 CGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCC 67438 || ||| ||| || ||||||||| |||| || || ||||| | ||||| |||||| Sbjct 26651 CGCCAGGGCGAGATCGTCGACCTGGGCGTGAAGCTCGGTCTGGTCGACAAGTCCGGCGCC 26710 Query 67439 TGGTTCAAGTACGGGGACAAGAACGTCGCTCAGGGCAAGCCCAAGGCCGTCCAGTGGCTC 67498 |||| | ||| || ||| || ||| ||||||||| ||| ||| | ||| || Sbjct 26711 TGGTACGCCTACCAGGGCAACAAGATCGGGCAGGGCAAGGGCAATGCCTGCAAGTTCCTG 26770 Query 67499 AAGGCCAACCCGGACAT 67515 || |||||||| || Sbjct 26771 CTGGAGAACCCGGATAT 26787 >seq14 Length=669857 Score = 208 bits (230), Expect = 4e-49 Identities = 455/678 (67%), Gaps = 15/678 (2%) Strand=Plus/Plus Query 66707 CTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGC 66766 || ||| ||| ||||| ||||| || | |||| |||||| | || ||||||||||| Sbjct 599864 CTCGACATCGCGCTGGGGATCGGCGGATTGCCGAAGGGCCGCATCGTCGAAATCTACGGG 599923 Query 66767 CCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCC 66826 || ||| || || ||| | || ||| || || | ||||||| | | |||||| Sbjct 599924 CCGGAAAGCTCCGGTAAGACCACGCTGACGCTGCATGTGGTGGCCGAAGAGCAGAAAAAG 599983 Query 66827 GGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCCGAGTACGCCAAGGCG 66886 ||||| | ||||| | | || || || || | |||||||| || || | Sbjct 599984 GGTGGTGTCTGCGCCTTCGTAGATGCCGAACATGCGCTGGACCCGATCTATGCGCGTAAG 600043 Query 66887 CTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTG 66946 || ||||| |||| || | || || | ||||| ||||||||||| ||||| || Sbjct 600044 CTGGGTGTCAACCTTGATGAACTGCTGATCAGCCAGCCCGACACTGGCGAACAGGCGCTT 600103 Query 66947 GAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTG 67006 || |||||||| || || || || | || | |||| || || ||||| || Sbjct 600104 GAAATCGTTGATACGCTGGTGCGTTCGGGTGCCGTGAGCCTCGTGGTGGTCGACTCGGTC 600163 Query 67007 GCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTG 67066 || || ||| ||| ||||| ||||||||||||| || ||| | |||||| Sbjct 600164 GCTGCGCTGACCCCGAAATCCGAGATCGAAGGCGACATGGGCGACGCTACTGTCGGCGCC 600223 Query 67067 CACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCAA- 67125 || || || || ||| ||||||||||||||||| || | | | ||| | || | || Sbjct 600224 CAGGCCCGACTGATGAGCCAGGCCATGCGCAAGCTGACGGCCTCGATCGGCCGCTCGAAT 600283 Query 67126 --CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTG---GGCTAC 67180 || | | | ||| |||||||| | || |||||||||| || ||| || Sbjct 600284 TGCATGGTCA---TCTTCATCAACCAGATCCGGATGAAGATCGGCGTGATGTTTGGCAAC 600340 Query 67181 GGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATG 67240 |||||| |||||||| || || | || ||| ||||| ||| ||||| || Sbjct 600341 --CCCGAA----ACCACCACCGGTGGCCATGCGCTGAAATTCTATGCCAGCGTCCGTCTG 600394 Query 67241 GATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGG 67300 || | |||||||||| | || ||||| |||| |||| || |||||| ||||| Sbjct 600395 GACATTCGTCGCATCGGCTCCATCAAGGATCGCGACGAGGTGGTTGGCAACTCGACCCGC 600454 Query 67301 GTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTG 67360 ||||| ||||| ||||||||| ||||||||||| | | | ||| ||| || || Sbjct 600455 GTGAAGGTCGTGAAGAACAAGGTGGCCCCGCCGTTCAAACAGGTCGAATTCGATATCATG 600514 Query 67361 TACGGGGAGGGCATCTCG 67378 || || |||||||||||| Sbjct 600515 TATGGCGAGGGCATCTCG 600532 >seq22220 Length=23789 Score = 113 bits (124), Expect = 2e-20 Identities = 200/287 (70%), Gaps = 6/287 (2%) Strand=Plus/Plus Query 65072 TGACTGAACTCAAAGACACCAACCCCAAGGACGCCGTAGGCACTGCCA-AGGTCCCGTAC 65130 || ||||||| |||||||||||||| || |||||| | |||| |||| | || | | | Sbjct 17756 TGGCTGAACTGAAAGACACCAACCCGAAAGACGCCATCGGCA--GCCAGAAGTTGCCT-C 17812 Query 65131 TCCAC--GATCCCCGCTCGGGTGGTCGCCGAGGTCGGCCTGGCAATGATGGAAGGCGCCC 65188 | ||| | || | | | ||| || | |||||| ||||||| || || | Sbjct 17813 TGCACCTGTGGCCAACGACCGCGACCGCGATGGGCTGCCTGGGGCTGATGGATGGTGCTC 17872 Query 65189 TGAAGTACGGCCGCCACAACTACCGCGTCTCCGGTGTCCGCGCTTCGGTCTACTACGACG 65248 ||||||| ||||| ||| | ||| | || || || || ||| |||||| ||| | Sbjct 17873 TGAAGTATGGCCGGGCCAATTGGCGCAAGGCTGGGGTGCGGGCCTCGATCTACTTCGATG 17932 Query 65249 CCGCCAAGCGCCACCTGGACGCCTGGTGGGAGGGTCAGGATATCGACCCCGACAGCGGCC 65308 ||||||| || ||||| | || |||| |||||| |||| |||||| |||||||| | Sbjct 17933 CCGCCAACCGGCACCTTGCTGCGTGGTTCGAGGGTGAGGAGGCCGACCCGGACAGCGGGC 17992 Query 65309 TGCCGCACCTCGTGAAAGCCATCGCCTGCCTTGTGGTCGTCCGCGAC 65355 |||||||||| | | | || | || ||||| | | || || |||| Sbjct 17993 TGCCGCACCTGGCGCATGCGCTGGCGTGCCTGGCGATCATCGTCGAC 18039 >seq43338 Length=9689 Score = 86.0 bits (94), Expect = 3e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 67189 TGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCG 67248 ||| || || || ||||| || || | | |||||||| ||||| || || ||| | || Sbjct 5571 TGAAACAACAACAGGCGGTAACGCACTTAAATTCTACGCTTCAGTACGTATCGATATTCG 5630 Query 67249 TCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAAGT 67308 ||| || | | | ||| ||||||||||||| ||| || ||| ||||| || ||||| Sbjct 5631 TCGTATTGGTTCAGTGAAAGAAGGCGATGAGGTTGTTGGTAACGAAACCCGCGTTAAAGT 5690 Query 67309 CGTCAAGAACAAGCTGGCCCCGCCG 67333 || || |||||| | || |||||| Sbjct 5691 TGTTAAAAACAAGGTTGCTCCGCCG 5715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242320939650032