Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_004913.3 Length=59866 Score E Sequences producing significant alignments: (Bits) Value seq11269 167 9e-37 >seq11269 Length=54388 Score = 167 bits (184), Expect = 9e-37 Identities = 293/429 (68%), Gaps = 36/429 (8%) Strand=Plus/Plus Query 38639 TTCGACAATGCGCTCGGCTTCATCCTTGTCATAGATACCAGCAAATCCGAAGGCCAGACG 38698 ||| || || |||||||| || |||| ||| || || || || || ||||| || || || Sbjct 43124 TTCAACGATCCGCTCGGCCTCGTCCTGGTCGTATATGCCGGCGAACCCGAACGCGAGGCG 43183 Query 38699 GGCACACTGAATCATGGCTTTATGCCGTAACATCCGTTTGGGATGCGACTGCCACGGGCC 38758 || ||||||||||| || || || || ||||| || || || ||||||||||| || Sbjct 43184 TGCGCACTGAATCATTGCCTTGTGGCGCAACATGCGCTTCGGGTGCGACTGCCATGG--- 43240 Query 38759 GGTGATTTCTCTGCCTTCGCGGGTTTTGAATGGTTCGCGGCGGCATTCATCCATCCACTC 38818 || |||| ||| | || || || ||| |||| Sbjct 43241 --------------CT----GGGTGTTGC--GCTTA-------CACTCCGACATGTACTC 43273 Query 38819 GGTAACGCAGATCGGATGATTACGGTCTTTGCGGTAAATCCGGCA--TGTACAGGATTCA 38876 ||| | | | |||| || ||||||||||| || | || ||||| ||||| | ||| Sbjct 43274 GGTGATGGTGGTCGGGTGCTTACGGTCTTTCCGATGGATTCGGCAGGTGTACTCGCTTCC 43333 Query 38877 TTGTCCTG----CTCAAAGTCCATGCCATCAAACTGCTGGTTTTCATTGATGATGCGGGA 38932 | | | ||| || ||||||||||| |||||| ||| ||| |||||||| || || Sbjct 43334 GTCAGCCGGCATCTCGAAATCCATGCCATCGAACTGCGGGTGTTCGTTGATGATCCGCGA 43393 Query 38933 CCAGCCATCAACGCCCACCACCGGAACGATGCCGTTCTGCTTATCAGGGAAGGCGTAAAT 38992 |||||| || | ||| || ||||| || |||||||| | ||| || ||||||||||| | Sbjct 43394 CCAGCCGTCCAGGCCAACTACCGGCACAATGCCGTTGTTCTTGTCGGGGAAGGCGTACAA 43453 Query 38993 TTCTTTCGTCCACGGATTAAGGCCGTACTGGTTGGCGACGATCAACAATGCGATGAACTG 39052 ||||| || | || || || |||||||| ||| ||||||| || || | | ||| Sbjct 43454 CTCTTTGGTGAAGGGGTTCAGCTTGTACTGGTCGGCTACGATCAGCAGGGCAACCATCTG 43513 Query 39053 CGCATCGCT 39061 ||| || || Sbjct 43514 CGCGTCACT 43522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 191039839942496