Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_005056.1 Length=32684 Score E Sequences producing significant alignments: (Bits) Value seq5373 105 1e-18 >seq5373 Length=95907 Score = 105 bits (116), Expect = 1e-18 Identities = 142/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 16637 CGTGACGGTTTCCGCTTCTGGGGTAACCGTACCTGCTCTGATGATCCGCTGTTCCTCTTT 16696 ||||| || ||||| || |||||| ||||| || |||| |||||| | || ||| Sbjct 44906 CGTGATGGCTTCCGTTTTTGGGGTTCACGTACTTGTTCTGCTGATCCTTTATTTGCATTT 44847 Query 16697 GAAAACTACACCCGCACCGCGCAGGTGCTGGCCGACACGATGGCTGAGGCGCACATGTGG 16756 ||||||| || || || || || || || | |||||||||||||| | || |||||| Sbjct 44846 GAAAACTCAACTCGTACAGCTCAAGTTTTGTCGGACACGATGGCTGAAGGTCATATGTGG 44787 Query 16757 GCGGTGGACAAGCCCAT-CACCGCAACGCTGATTCGCGACATCGTTGACGGCATCAATGC 16815 || || || || || | |||| || | || |||||||| || ||||| ||||| Sbjct 44786 GCAGTTGATAAACCTTTGCACC-CATCTTTGGCGAAAGACATCGTAGAGGGCATTAATGC 44728 Query 16816 CAAATTCCGTGAGCT 16830 |||||||||||| || Sbjct 44727 CAAATTCCGTGATCT 44713 Score = 82.4 bits (90), Expect = 2e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 17297 CGTTTTGCAGGCTCTTACCAGCGTGACGATACCGGCGAAACGGTGGCCGTCGAAGTGGTC 17356 || ||||| ||||| ||||| ||||||||||| || ||||| || |||||||| ||| Sbjct 44248 CGCTTTGCTGGCTCATACCAACGTGACGATACAGGTGAAACATCTGCAGTCGAAGTCGTC 44189 Query 17357 ATGCGTGGACGTCAGAAAGAAATCGACACCGGCGAGGGCAAACAGGGAGAAGACACCGAG 17416 || ||||| ||||| ||||||| || ||| | | |||| ||| || || || ||| Sbjct 44188 ATCCGTGGCCGTCATGAAGAAATTGATTTTGGCAATGCCAAAGCGGGTGACGATACTGAG 44129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104243608590672