Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_005083.2 Length=244834 Score E Sequences producing significant alignments: (Bits) Value seq5 127 3e-24 >seq5 Length=869209 Score = 127 bits (140), Expect = 3e-24 Identities = 307/463 (66%), Gaps = 4/463 (1%) Strand=Plus/Plus Query 147148 TTTCGCTACCTACACCGATTATGGCAGGCGTTCGTACCCCGACACGTCAATTTAGCTCGT 147207 |||| || || ||||| |||||| | ||||| |||||||| || ||||| || ||||| | Sbjct 710757 TTTCACTGCCGACACCTATTATGTCGGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCT 710816 Query 147208 GTGTGAAAATCGAATCTGGCGACTCGCTGCGTTCGATCAACAAGGTATCTGAAG--CTAT 147265 | || || || | ||| ||| ||| ||||||||| | | || || | || Sbjct 710817 GCGTACTGATTGAGTGTGGTGACAGCCTGGATTCGATCAAT--GCCACCTCCAGTGCCAT 710874 Query 147266 CGTTGATTACATTAGTAAACGTGCGGGTATTGGCGTAAACGGTGGTGCAATTCGAGCAGA 147325 || | ||| | | || || |||||||| | |||| || ||||| || Sbjct 710875 TGTAAAATACGTGTCGCAGCGCGCAGGTATTGGTATTAACGCAGGCCGTATTCGCGCTTT 710934 Query 147326 GGGTTCGGTTGTACGTGCGGGTGAAATTCGTCACACTGGCGTAATTCCTTTCTGGAAACA 147385 ||| | ||| || ||| ||| |||||| || || || | || || Sbjct 710935 AGGTAGCCCAATCCGTAATGGCGAAGCCTTTCATACTGGCTGTATCCCGTTTTATAAGCA 710994 Query 147386 CTTTCAGACTGCGGTTAAATCGTGTTCTCAAGGTGGTGTACGTGGCGGTGCTGCGACTCT 147445 || ||||| || || ||| || || ||||| ||||| ||||| ||||| || || || Sbjct 710995 TTTCCAGACCGCAGTAAAAAGCTGCTCGCAAGGCGGTGTGCGTGGTGGTGCCGCCACCCT 711054 Query 147446 GACTTACCCGATCTGGCACTTAGAAGTAGAAAAGCTTCTTGTTCTGAAGAACAACAAAGG 147505 | ||||| | ||||| | ||||| ||| ||| || || ||||| || ||| || Sbjct 711055 GTTCTACCCCTTGTGGCATCTGGAAGTGGAATCGCTGCTGGTACTGAAAAATAACCGCGG 711114 Query 147506 TGTTGAAGAGAACCGTATTCGTCATCTTGACTACAGCGTATCAATTAACCGATTGATGAT 147565 ||| ||||||||||| | | ||||| ||||| |||| ||||||| ||||| Sbjct 711115 TGTAGAAGAGAACCGGGTAAGGCATCTGGACTATGGCGTGCAGTTTAACCGCCTGATGTA 711174 Query 147566 GCAACGCCTGGTTAATAACGAGTACATCACGCTATTCAGCCCC 147608 || |||||| |||| | || || ||||| | ||||||||| Sbjct 711175 TCAGCGCCTGATTAAAGATGACTATATCACCTTGTTCAGCCCC 711217 Score = 84.2 bits (92), Expect = 3e-11 Identities = 116/162 (72%), Gaps = 8/162 (5%) Strand=Plus/Plus Query 149016 AATCTGAAGTATCAATCACTGCTAGACTCAGTGCAGGGTCGTGCGCCTAATATCGCGTTC 149075 |||||||| || || | ||||| ||||||||||||||||| |||| || |||| | Sbjct 712727 AATCTGAAATACCAGACGCTGCTGGACTCAGTGCAGGGTCGCTCGCCGAACGTCGCCCTG 712786 Query 149076 TTGCCTATCTGTAGTGACAACTC----GCTTGAAAACTGGATCACTACGTGGGACTTCAG 149131 ||||| | | ||| | | || ||| |||| |||||| || |||| ||| || Sbjct 712787 TTGCCGA----TTGTGTCTATTCCGGAGCTGGAAACCTGGATTGAAACCTGGGCCTTTAG 712842 Query 149132 TGAAACTATTCACAGTCGCTCTTACACGCACATCATGCGCAA 149173 |||||| |||||||| ||| ||||| || || || || || Sbjct 712843 TGAAACCATTCACAGCCGCAGCTACACCCATATTATCCGTAA 712884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 781575972344640