Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_005178.1 Length=37611 Score E Sequences producing significant alignments: (Bits) Value seq11269 149 2e-31 >seq11269 Length=54388 Score = 149 bits (164), Expect = 2e-31 Identities = 157/202 (78%), Gaps = 6/202 (3%) Strand=Plus/Minus Query 19354 TGAAGCCTGACGCCTCCAACCACAATCCAGACCCGCGCTACCTGCGCGGGCTGCTCAAGA 19413 |||||||||||||||||||||||||||||||||||| |||||||||||||||| || | | Sbjct 10031 TGAAGCCTGACGCCTCCAACCACAATCCAGACCCGCACTACCTGCGCGGGCTGGTCGACA 9972 Query 19414 AAGCCGGCATCAGCCAACGGCGCGCAGCCGAGCTGCTCGGCC--TCGGTGACAGGGTGAT 19471 |||| || ||||||| || | ||||||||| ||||||||| ||| | | || | | Sbjct 9971 AAGCAGGTGTCAGCCAGCGTCAGGCAGCCGAGTTGCTCGGCCTGTCGTGGCCTGGCT--T 9914 Query 19472 GCGCTATTACCTGAGCGAGGACGTCA-AGGAGGGCTACCGTCCCGCGCCGTATACCGTCC 19530 ||| | |||||| |||| || |||| | || ||| || |||| || ||||| || | Sbjct 9913 CCGCAACTACCTGCGCGACGA-GTCACACCAGCTCTATCGAGCCGCACCCTATACAGTTC 9855 Query 19531 AGTTCGCCCTGGAGTGCCTTGC 19552 | ||| | || || ||||| || Sbjct 9854 AATTCTCTCTTGAATGCCTGGC 9833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119976263725336