Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq4663 250 2e-61 seq18050 221 1e-52 seq38288 215 4e-51 seq77092 107 2e-18 seq76486 107 2e-18 seq5663 96.9 3e-15 seq27548 86.0 5e-12 seq84794 84.2 2e-11 >seq4663 Length=104512 Score = 250 bits (276), Expect = 2e-61 Identities = 639/951 (67%), Gaps = 59/951 (6%) Strand=Plus/Plus Query 12876 CTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAAAG 12935 |||| | ||||| ||||| || || ||| |||| || |||||||||||||||||||||| Sbjct 34247 CTCTCCTATCAAAGAAGTTAGTCTTACCTACTAAAGATATATTTTCCATAAAATCGAAAG 34306 Query 12936 GATTTTTCGAACAATAGTATTTTTTACACCCTAATTCTAGTAA-CAATCTGTCAGCAACA 12994 | || | ||| ||||| | | || || | || ||| |||||||||||| | | Sbjct 34307 GGTTGGCTGTGTTATAATATTTCTCCAATCCCAAAT-TAATAAGCAATCTGTCAGCCATA 34365 Query 12995 AACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATAGCT 13054 || || || |||| |||||| | ||| |||||| |||| | ||||| || | |||| Sbjct 34366 AATTCAATATACTCACACATTAATTTACAATTCATTTCTATAAGATTTACTGGTA-AGCT 34424 Query 13055 T-CTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTCTCTTAT-TACG- 13111 | | ||||||| | || |||||| || | ||| ||||||| || ||| || | Sbjct 34425 TACACTTAAAAATTATTGTTCTATGATGACAGATTCTTTAACTATATCGAGTATGTAAGG 34484 Query 13112 ----TTCTCTAATGGAGGATTTGATA-GATGCTTAAACATCATACATGCAAAATCACAGT 13166 || | |||| | ||||| || | || ||||||||||||||||| Sbjct 34485 AGACTTGT-TAATTAAATATTTGTTAAGGTG------------ACATGCAAAATCACAGT 34531 Query 13167 GCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTC 13226 | | |||||||||||| || || || || || | || ||||| | ||||| || || | Sbjct 34532 GAAGTCCTTCATCTCTGCTAATAAGTTCATTGGCGAAGGTTAGGACAGGCATCAGTCCAC 34591 Query 13227 GTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTG 13286 | || || | ||| || || | |||||| | ||||||||| ||||||||||| || | Sbjct 34592 GATTCTTCAACCAGAAGATTGAAGCAAATGCACCCGAAAAGAATATTCCTTCTACACAAG 34651 Query 13287 CAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTC-------TCTATCCACTTT 13339 |||| |||| | ||| | ||| | || | || | |||||| || Sbjct 34652 CAAATGCTA------CTACACGAGTGGTA--AATTAGATTCCGGGTATTGTATCCATTTC 34703 Query 13340 CTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTT--CTATTGCGTTAAATAAAT 13397 ||||||| ||||| | |||| ||| | |||| | || | |||| |||| Sbjct 34704 AAAGCCCAGTCAGCTTTCTTCTTAATGCA--TGGTATTGTGGTAATAACATTAAGCAAAT 34761 Query 13398 AAtttttttCCTTACTG-TCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAA 13456 | | || | ||| || |||||||| |||||| | || |||||| || | | Sbjct 34762 -GTGTCTTCTGATCCTGATCAGTAATATAAGCATCTATTAGTAGAGAATACATCTCGGTA 34820 Query 13457 TGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACT 13516 || ||||| || || |||| |||||| |||||||| ||| | || | | ||| ||| Sbjct 34821 TGGATATTCTCTATTGCTACTTGGAATCCATAAAAGCATTTTGCTTTTAGTACAATCACT 34880 Query 13517 TCGGAGTA--AAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGC-aaaa 13573 || |||| |||||||||| | | | | | || || || || || | ||| |||| Sbjct 34881 TC--AGTAATAAATCTTTCTACAAGATCTGCATTCACAATTCCATCTGATGAAGCAAAAA 34938 Query 13574 aaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAACTTTAACCAATCTGGA 13633 |||||||| |||| |||||| | | | ||||| || | || | ||||||| | Sbjct 34939 AAAGCAAGGATGTTTGAAATAAAATATCTCTCGTTATCAGTCAGAGTAGACCAATCATGT 34998 Query 13634 AAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATAC 13693 ||| ||||| ||| || || ||||| ||||| || ||| ||||||| |||||| Sbjct 34999 CTATCAGCTGATAGATCAACTTCTTCAACTGTCCAGAATGAACTCTCAGCCTTTTTATAC 35058 Query 13694 ATCATCCATATATCCTTATAAACAATGGGAAACACAACGTATCTTCCAGTTGTCTG--TC 13751 ||| ||||||||| | || || ||||| | |||||||||| | | |||| || Sbjct 35059 ATCTGCCATATATCATGGTACCTGATAGGAAAGAGAACGTATCTTTC-TTCTTCTGGATC 35117 Query 13752 TTAAAATCGGTTCACTGACTACATCCATTTTAA-AGATAAAATAATATTTA 13801 | | ||| ||||| | ||| | ||| ||| |||||||||| ||||| Sbjct 35118 TAATAAT-AGTTCAATAACT---TTCATGCTAAGGGATAAAATAA-ATTTA 35163 >seq18050 Length=32055 Score = 221 bits (244), Expect = 1e-52 Identities = 496/730 (68%), Gaps = 30/730 (4%) Strand=Plus/Plus Query 12859 TTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATT 12918 ||| || ||||| | || | ||||| |||| | || ||||||||||| || |||| Sbjct 11575 TTTCTGGTATTCCCCGACACGTTTTTAAAAACAATTGGTTTTTCCTTCCAAACTAATACA 11634 Query 12919 TTCCATAAAA-TCGAAAGGATTTTTCGAACAATAGTATTTTTT--ACACCCTAATTCTAG 12975 ||||| |||| || ||||| |||| | |||||| | |||| |||||| ||||| Sbjct 11635 TTCCAAAAAAATCAAAAGGGTTTTCC--ACAATATAAATTTTATCACACCCCAATTCCCA 11692 Query 12976 TAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTAT 13035 || |||| ||| || ||||| || || || || || || || ||| ||||| || || Sbjct 11693 CAATAATCGGTCTGCCACAAATTCAATATATTGCTTTATCAATGTACAATTCATGCCAAT 11752 Query 13036 TAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTT-CGATA- 13093 | ||| || | || || |||||||| | || || || || || | ||||| Sbjct 11753 GAGGGATACTGGTAATGCCTCGGTTAAAAATTCTTGCTCAATCGTTACGGCATACGATAT 11812 Query 13094 ACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAG-------ATGCTTAAACAT 13146 | | || | | ||| | || | || |||||| | ||| || |||| Sbjct 11813 AATTTG-CACAATTTAA-TGCT----TAGATGATTTGTTTTTTACGTAATGATTGAACAA 11866 Query 13147 CATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGT 13206 ||| | |||||| ||||| | |||||||||| ||| || | |||||| ||| || Sbjct 11867 GTGACAGGAAAAATCGCAGTGTAGCCCTTCATCTCGACTAATCAACTCGTTGCTAAACGT 11926 Query 13207 TAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaa 13266 || | ||||| | || ||||| || | |||||| || || ||||| ||||| || || Sbjct 11927 TAATCAAGGCATTAATCCCCGTTTCTTTAACCAAAAAATGGCCGCAAAGGAACCTGAGAA 11986 Query 13267 aaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACT 13326 || |||||||| || || ||||| || | || || || | | | || |||| Sbjct 11987 AAGGATTCCTTCCACAGCGGCAAAGGCCACCAGCCGTTTTGGAAAAG-ACGGGTTTTG-- 12043 Query 13327 CTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGC 13386 |||||| ||| | ||| | ||| |||| ||||||||| | |||| || || Sbjct 12044 ---TATCCAATTTAATGACCATTCTGCCTTTTTCTTAACGCAGGAAAGGGTTTCAATGGC 12100 Query 13387 GTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATA 13446 |||||| || ||||||||| | | ||| || || || ||||| ||||| || Sbjct 12101 GTTAAACAATGTATTTTTTTCTTGATGATCTCGAACGAGGGTCTCAATCAACAAGCTGTA 12160 Query 13447 CATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGA 13506 ||||||||||||||||||||| || || || || || ||||||| || | |||||| || Sbjct 12161 CATTTCTGAATGAATATTTTCAATGGCAATCTGAAAGTCATAAAAGCAACGAGCCTC-GA 12219 Query 13507 T-ACCTGAACTTC-GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTA 13564 | || | ||||| ||| ||| | ||| |||| ||||| || || || || ||||| Sbjct 12220 TCACTTTTACTTCACGAG-CAAAGCGTTCCACTAAATTTTCATTTACAATACCTTCACTG 12278 Query 13565 GCAGCaaaaa 13574 || ||||||| Sbjct 12279 GCGGCAAAAA 12288 >seq38288 Length=11396 Score = 215 bits (238), Expect = 4e-51 Identities = 390/565 (69%), Gaps = 18/565 (3%) Strand=Plus/Plus Query 13150 ACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAG 13209 ||| |||||||| ||||| | ||||||||||| ||| || | || ||| ||| |||| Sbjct 7670 ACAGGCAAAATCCCAGTGTAGTCCTTCATCTCGACTCATCAACTTGTTGCTAAACGTTAA 7729 Query 13210 ACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaa 13269 || ||||| | | ||||| || | |||||| ||||| | ||| ||||| || ||||| Sbjct 7730 TCCAGGCATTAATTCCCGTTTCTTTAACCAAAAAATAGCCGAAAAGGAACCTGAGAAAAA 7789 Query 13270 TATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTC 13329 |||||||| || || ||||| || | ||||| || || | | ||||| Sbjct 7790 GATTCCTTCCACAGCGGCAAAGGCCACCAACCGTTTTGCAAAAGATGGATTTTG------ 7843 Query 13330 TATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTT 13389 |||||| ||| ||||| | ||| |||| |||| |||| | |||| || ||||| Sbjct 7844 TATCCAATTTAATGCCCATTCTGCCTTTTTCTTAAAGCAGGAAAGGGTTTCAATGGCGTT 7903 Query 13390 AAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCT--ATCAATAAGCTATAC 13447 ||| || | ||||||||| | | ||| |||| || |||| |||| ||||| ||| Sbjct 7904 AAACAATTTATTTTTTTCTTGATGATCTCAAATG--AGGATCTCAATCAGCAAGCTGTAC 7961 Query 13448 ATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGAT 13507 ||||||||||| |||||||| || || || || || |||||||| || | | | || | Sbjct 7962 ATTTCTGAATGTATATTTTCAATGGCAATCTGAAAGCCATAAAAGCAACGAACTTCGGTC 8021 Query 13508 ACCTGAACTTCG-GAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGC 13566 || | |||||| ||| || | ||| |||| ||||| | || || || ||||| || Sbjct 8022 ACTTTGACTTCGCGAG-CGAAGCGTTCCACTAAATTTTCAATTACAATACCATCACTGGC 8080 Query 13567 AGCaaaaaaaGCAAGTATGTGCTTAATAAAtt---ttttttCGTTTTCTGACAACTTTAA 13623 |||||||| || || | || || ||| | ||| ||| | || || Sbjct 8081 GGCAAAAAAGGCCAGAACATGGGAAAGAAAATGCCATTTATCG---GGGGTTAATCTTTC 8137 Query 13624 CCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGC 13683 ||||||| |||||| || ||||| || || || | ||||| || ||||| ||||| Sbjct 8138 CCAATCTCCCCCATCTTTGGACAAATCCACTTCTTCTGCCGTCCAGAAGGAAGCGACAGC 8197 Query 13684 CTTCTTATACATCATCCATATATCC 13708 ||| || |||| | ||| | |||| Sbjct 8198 CTTTTTGTACAAGAGCCACAAATCC 8222 >seq77092 Length=4929 Score = 107 bits (118), Expect = 2e-18 Identities = 176/254 (69%), Gaps = 6/254 (2%) Strand=Plus/Minus Query 13154 GCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCC 13213 |||||||||||||| | ||||||||||| ||| || | ||||| ||| |||| || Sbjct 275 GCAAAATCACAGTGTAGTCCTTCATCTCGACTAATCAATTCGTTGCTAAACGTTAATCCA 216 Query 13214 GGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATT 13273 ||||| | || ||||| || | || ||| || || ||||| ||| || ||||| ||| Sbjct 215 GGCATTAATCCCCGTTTCTTTAACCGAAAAATGGCCGCAAAGCAACATGAGAAAAAGATT 156 Query 13274 CCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATC 13333 ||||| || || ||||| || | | | | || || | | |||| | |||| Sbjct 155 CCTTCCACAGCGGCAAAGGCCACCTATCGTTTTGCAAAAGATGGATTT------TGTATC 102 Query 13334 CACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAAT 13393 || ||| ||||| | ||| |||| |||||| | | | |||| || |||||||| Sbjct 101 CAATTTAATGCCCATTCTGCCTTTTTCTTAACGAAAAAAAGAGTTTCAATGGCGTTAAAC 42 Query 13394 AAATAAtttttttC 13407 || ||||||||| Sbjct 41 AATATATTTTTTTC 28 >seq76486 Length=4962 Score = 107 bits (118), Expect = 2e-18 Identities = 163/231 (71%), Gaps = 7/231 (3%) Strand=Plus/Minus Query 13165 GTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCC 13224 ||| ||||||||||||| ||| || | |||||| ||| |||| || ||||| | || Sbjct 226 GTGTAATCCTTCATCTCGACTAATCAACTCGTTGCTAAACGTTAATCCAGGCATTAATCC 167 Query 13225 TCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGC 13284 ||||| || | |||||| || || ||||| ||||| || ||||| |||||||| || || Sbjct 166 CCGTTTCTTTAACCAAAAAATGGCCGCAAAGGAACCAGAGAAAAAGATTCCTTCCACAGC 107 Query 13285 TGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATCCACTTTCTGGC 13344 ||||| |||| ||| || || | | |||| | |||||| || || Sbjct 106 GGCAAAGGCTACCAATTGTTATGCAAAAGATAGATTT------TGTATCCAATTAAATGC 53 Query 13345 CCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAA 13395 ||| | ||| |||| |||||||||| | |||| || |||||||| || Sbjct 52 CCATTCTGCCTTTT-TTTAACGCAGGAAAGGGTTTCAATGGCGTTAAACAA 3 >seq5663 Length=92856 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/192 (71%), Gaps = 8/192 (4%) Strand=Plus/Minus Query 13538 AAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAA- 13596 |||||||| || || || || ||||| ||||||||||| || | || || ||||| Sbjct 71992 AAGTTTTCATTCACAATGCCATCACTGGCAGCAAAAAAGGCTAAAATATGGGAGATAAAA 71933 Query 13597 ---ttttttttCGTTTTCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTAC 13653 |||| || || ||| || ||| ||||||| | |||||||||||| || || Sbjct 71932 TGCTTTTCTTCCGGTTTT----AATTTTTCCCAATCTATCAGATCTTTTGATAAGTCAAC 71877 Query 13654 CTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATA 13713 || ||| | |||||||| || || |||| ||||| ||||| ||| || |||| ||| Sbjct 71876 TTCTTCAGCAGTCCAAAATGATGCTTCAGCTTTCTTGTACATTTGCCAGATGTCCTGATA 71817 Query 13714 AACAATGGGAAA 13725 |||| ||||| Sbjct 71816 CTCAATAGGAAA 71805 Score = 93.3 bits (102), Expect = 4e-14 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 13420 AATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTG 13479 ||||||||||||||| | | ||| |||||||| ||||| | |||||| || || ||||| Sbjct 73652 AATATAAGTATCTATAAGAAGGCTGTACATTTCAGAATGTACATTTTCAATGGCGATTTG 73593 Query 13480 GAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTC 13518 ||| ||||||||||| || || || | || |||||||| Sbjct 73592 GAACCCATAAAAACACCTTGCTTCAGTCACTTGAACTTC 73554 Score = 93.3 bits (102), Expect = 4e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 13175 TCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTA 13234 |||||||| ||||||||||| || ||||| | ||| ||||| | |||| || || Sbjct 79464 TCATCTCTGCTTATTAGCTCATTGCTGAATGTCAAACCAGGCATCAAACCTCTCTTCTTC 79405 Query 13235 ATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGC 13293 | ||| || |||| |||||| || || || || ||||||||||||||||| ||||| || Sbjct 79404 AACCAGAAAATAGAAGCAAAAGAGCCAGAGAAGAATATTCCTTCAACTGCAGCAAATGC 79346 >seq27548 Length=17515 Score = 86.0 bits (94), Expect = 5e-12 Identities = 162/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 12801 TTTAAAAATCAATATCTAGAGAAAATACATCATCGTCCTTATTTGACATAACAG-ACATT 12859 || ||||||| ||| || | ||| | || || || || || ||||| || ||||| Sbjct 252 TTCAAAAATCCTCATCCAGTGTAAACATATGATTTTCTTTGTTGGACATGACTCCACATT 193 Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919 | | | | ||| | || | ||| | |||||| || ||||||||||| || |||| | Sbjct 192 TCTGG-TGTTCTCCGACACGTTTCTTAAAAAAATTGGTTTTTCCTTCCAAACTAATACAT 134 Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTACACCCTAATTCTAGTAAC 12979 ||||||||||| ||||| |||| | ||| ||| | ||| || ||||| || Sbjct 133 TCCATAAAATCAAAAGGGTTTTCCACGTTATAAATTTTATCACATCCCAATTCCCACAAT 74 Query 12980 AATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTAT 13035 |||| ||| || ||||| || || || | ||||| || ||| ||||| || || Sbjct 73 AATCGGTCTGCCACAAATTCAATATATTTCTTCATCAATGTACAATTCATGCCAAT 18 >seq84794 Length=3643 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 12859 TTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATT 12918 ||| || ||||| | ||| | |||||||||||| | ||||||||||| || |||| Sbjct 3376 TTTCTGTTATTCTCCAACACGTTTTTCAAAAAAACTGGTTTTTCCTTCCAAACTAATACA 3317 Query 12919 TTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTACACCCTAATTCTAGTAA 12978 |||||||||||| ||||| |||| | ||| ||| | ||| || | ||| || Sbjct 3316 TTCCATAAAATCAAAAGGGTTTTCCACGTTATAAATTTTATCACATCCCAGTTCCCACAA 3257 Query 12979 CAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAA 13017 |||| ||| || ||||| || || || || ||||| || Sbjct 3256 TAATCGGTCTGCCACAAATTCAATATATTGCTTCATCAA 3218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430035692746872