Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_005262.3 Length=63882 Score E Sequences producing significant alignments: (Bits) Value seq1 327 5e-85 seq4461 134 6e-27 seq10932 96.9 1e-15 seq50 89.7 2e-13 >seq1 Length=1655743 Score = 327 bits (362), Expect = 5e-85 Identities = 556/799 (70%), Gaps = 29/799 (4%) Strand=Plus/Plus Query 28551 CCGTACCGCCACAACCGCTACCCGTTCACGCCTATCTGGGGCTTCCGCCGCGCGCGCGAC 28610 || ||||| |||||||| | ||||||||| || ||||||||| ||| || | || Sbjct 414847 CCCTACCGGCACAACCGTTTCCCGTTCACCCCGATCTGGGGCAACCGGAAGGC-CAATAC 414905 Query 28611 GG-CATGCCCTACGGCGTGATCCGCTTCATGCGCGGCATGCAGGACGACGTGAACAAGCG 28669 || | |||||| ||| | ||||| |||| || | ||||| ||| | |||||||| Sbjct 414906 GGGCGAGCCCTATGGCATCGTCCGCAACATGATCGACGCACAGGAGGACATCAACAAGCG 414965 Query 28670 CCTGTCGAAGGCGCTCTACATCCTGTCGACCAACAAGGTCCTGATGGAGGAAGGCGCGGT 28729 || || |||||||| |||||||| | |||||||||| | ||||||| ||||| || Sbjct 414966 CCGCTCCAAGGCGCTGGCGATCCTGTCCAGCAACAAGGTCATCATGGAGGCTGGCGCTGT 415025 Query 28730 CGACGATATCGACGAGTTCCGCCGCGAGGCCGCGCGCCCGGACGCCGTGATGACCGTGAA 28789 || |||| | ||| || | || || || || | | | || | ||| || Sbjct 415026 GCCGGACCTCGATGCCTTCGAGGAAGAAGTTGCCCGTCCCGATGGCATCATCATCGTCAA 415085 Query 28790 GAATGG---CAAGCTCGGCGCAGTGAAGATGGACGTCGACCGTGACCTCGCGCCCGCGCA 28846 ||| ||| | | || |||| ||||| || |||||||| ||| || Sbjct 415086 ---TGGGAACAAACGCCTCGATCTGAAT------GTCGATCGCAACCTCGCGGACGCACA 415136 Query 28847 TCTCGAGCTCGCGTCGCGCTCGATCCAGATGATCCAGCAGGTCGGCGGCGTCACGGACGA 28906 |||| || | | || ||||||||||||||| | | ||| ||||| || || Sbjct 415137 CATCGACATCATGGGTCAGTCCATCCAGATGATCCAGTCGTTGTCCGGTGTCACAGATGA 415196 Query 28907 GATGCTGGGACGCACGACGAACGCAGTGTCCGGCGTCGCGATCCAGGCACGGCAGGAACA 28966 | |||| ||||| |||||||| |||||| |||||| || |||||||| || Sbjct 415197 GGCCATGGGGCGCACCACGAACGCCTCATCCGGCAAGGCGATCATCGCCCGGCAGGATCA 415256 Query 28967 GGGCAGCGTCGCCAC---GAACAAGCTGTTCGATAACCTGCGCCTCGCCTTCCAGCAGCA 29023 || |||| ||| || || | ||||| |||||||| |||| ||| | || Sbjct 415257 GGCGTCCGTCAGCACCTCGACCA---TCTTCGACAACCTGCGTGCCGCCCGCCAATACCA 415313 Query 29024 CGGCGAGAAGGAGCTCAGCCTCATCGAGCAGTACATGACCGAGGAGAAGCAGTTCCGCAT 29083 |||||||||| |||| ||| |||| |||| |||||| || ||||||||||||||||| Sbjct 415314 CGGCGAGAAGATGCTCTCGCTCGTCGAACAGTTCATGACGGACGAGAAGCAGTTCCGCAT 415373 Query 29084 CACGAACAGCCGCGGCAACCCGGAATATGTGACGGTCAACGACGGCCTGCCCGAGAACGA 29143 |||||||||||| ||| | || || |||||||| |||||||| ||||| |||||||| || Sbjct 415374 CACGAACAGCCGGGGCCAGCCCGACTATGTGACAGTCAACGATGGCCTTCCCGAGAATGA 415433 Query 29144 CATCACGCGCACGAAGGCCGACTTCATCATCGACGAGGCCGAGTGGCGCGCGACCATGCG 29203 |||| ||| | |||||||| ||||||||| ||| | ||| ||||||||||| Sbjct 415434 CATCGTGCGGTCCAAGGCCGATTTCATCATCTCCGAAGATTCATGGTCAGCGACCATGCG 415493 Query 29204 TCAGGCGGCCGTCGCCGAGCTGATGG---AGGTCATCG-GCAAG-----ATGCCGCCGGA 29254 ||||| |||| || |||||| ||| | || || | || | ||| | Sbjct 415494 GCAGGCCCAGGTCGAACAGATGATGGCGCTGGTGACCGAGCTTGCGCCTGTGGCCCCGCA 415553 Query 29255 GATCGCGCTGACGATGCTCGACCTGCTCGTCGAGAACATGGACATCCCGAACCGCGACGA 29314 | | | |||| | || |||||||||| ||||| | ||||| |||| | ||||||||| Sbjct 415554 GCTGGTGCTGGTGCTGATCGACCTGCTTGTCGAAATGATGGATGTCCCCAGCCGCGACGA 415613 Query 29315 GCTCGTGAAGCGCATCCGC 29333 | ||||||||||||||||| Sbjct 415614 GATCGTGAAGCGCATCCGC 415632 Score = 302 bits (334), Expect = 2e-77 Identities = 634/957 (66%), Gaps = 2/957 (0%) Strand=Plus/Plus Query 31576 CGAAAACGCCGTCATCCAGCGCAAGACCGAGCTCGAATCCGACGCCGGCGATCGCATCAC 31635 ||| ||| ||||||| | |||| || ||| ||||| ||||| || || | | Sbjct 417419 CGAGAACTTCGTCATCGAAGAGAAGATGGACATCGCCTCCGATGCCGGTGACCGGGTTTC 417478 Query 31636 CTTCGACCTCTCCGTGCACCTGCGCGGCAAGCCGACCTACGGCGATGCCCGCGTGGAAGG 31695 ||||||||||| || | ||||||| |||||||||| ||||||||||||||| | || Sbjct 417479 TTTCGACCTCTCGGTTCGCCTGCGCCAGAAGCCGACCTTCGGCGATGCCCGCGTCAAGGG 417538 Query 31696 TAAGGAAGAAAGCCTTCGCTTCTACCAGGACGAAGTGCGCATCGACCAAGTGCGTCACTC 31755 |||||||| || ||||||||| || ||||| ||||||||| |||| ||| | Sbjct 417539 CAAGGAAGAGCATCTGCGCTTCTACACCGATGAAGTCGTCATCGACCAGATGCGCCACCC 417598 Query 31756 GGTTTCGGCCGGCGGTCGCATGTCGCGCAAGCGCACGGTCCACAACATCCGCCGCATCGC 31815 || ||||| ||||| |||||||||||||| ||||| |||||| | | ||| |||| Sbjct 417599 TGTCTCGGCGGGCGGCCGCATGTCGCGCAAACGCACCGTCCACGATCTGCGCAAGGTCGC 417658 Query 31816 GCGCGATCGTCTCGGTGACTACTTCTACAAGTTCACCGACGAGCTGCTGTTCATCTACCT 31875 | | || || ||||||| | ||| |||||| ||| |||||||| || Sbjct 417659 GAAACAGCGCCTGAAAGACTACTGGAAACAGTATCTGGACGAGATGCACTTCATCTATCT 417718 Query 31876 GTCGGGTGCACGCGGCATCAACCTCGACTTCATCGAAACGCCCGACTTCACGGGCTANNN 31935 |||||| || || ||||||||| || |||||||| ||| || | |||| Sbjct 417719 GTCGGGCGCCCGTGGCATCAACGAGGAATTCATCGAGGATACCGCCTATTCCGGCTTTGC 417778 Query 31936 NNNNNNNNNNNNNNNNNNNNNNNACGTCGACCACCTGCTGTACGGCGGTGTGGCGACGAG 31995 | || ||| | |||| || ||| || || Sbjct 417779 AAGCAACGCCCTGACCGCACCGGATTCCGCGCACATCCTGTTCGCTGGTTCCGCTACCTC 417838 Query 31996 CAAGGCATCGCTCGCAGCGACCGACATCATGGCCCCGCTCGTCATCGAGAAGGCCGTGGA 32055 |||| | || | || ||||||||||| | | | | |||||| ||| | | Sbjct 417839 GGTGGCAACCATCACCTCGTCCGACATCATGTCGCGCACCCTGATCGAGCGGGCGGCGAC 417898 Query 32056 AAAGGCCGCGATGATGCAGGCCGAAAACCCGGACGTCGCGAACATGGTCCCGGTCAGCAT 32115 ||| |||||||| || |||| || | | | ||||||| |||||| | Sbjct 417899 GCGGGCGAAGATGATGCGTTCCATCGACCCCGATGCCACCGACATGGTGCCGGTCTCGGT 417958 Query 32116 CGACGGCGACGACCACTACGTCTGTGTCATGTCCGAGTATCAGGCGACGGACATGCGCAC 32175 ||| ||||| || | || | || || ||||| ||||||| ||||||| Sbjct 417959 CGAAGGCGAGGATCGCTTCATCACCGTGATGTCGCCCTATCAGGAATTCTCGCTGCGCAC 418018 Query 32176 CGCAGCGGGCGGCACG-TGGATCGACTTCCAGAAGGNNNNNNNNNNNNNNNNNGGTCGGA 32234 ||| | | | || | ||||||||| ||||||||| || |||| Sbjct 418019 CGCCGACG-CTGCGGGCTGGATCGACATCCAGAAGGCCGCTGCCGCCGCCGAAGGCCGGA 418077 Query 32235 ACAACCCGATCTTCAAGGGCGGCCTCGGCATGATCAACAACGTCGTGCTGCACAAGCATC 32294 | ||||| |||||| | ||| || ||||||||||||||||| ||||||||| || Sbjct 418078 AGAACCCCATCTTCCAAGGCTCGCTGGGCATGATCAACAACGTGGTGCTGCACTGCCACG 418137 Query 32295 GCAACGTGATCCGCTTCAACGATTACGGCGCGGGCGCGAACGTCGAGGCAGCGCGTGCGC 32354 |||||||||||||||| | | |||||||| || | ||| | ||| ||||| |||| Sbjct 418138 AGAACGTGATCCGCTTCAGCAACTACGGCGCTGGTTCCAACCTTCCGGCGGCGCGGGCGC 418197 Query 32355 TGTTCATGGGCCGTCAGGCAGGCGTGATCGCCTACGGCACGGCCAACGGCCTCCGCTTCG 32414 ||||| | | || ||||| ||||||||||| |||||||| || |||| | |||||| Sbjct 418198 TGTTCCTCGCGCGCCAGGCGGGCGTGATCGCTTACGGCACCCCCGGCGGCATGCGCTTCA 418257 Query 32415 ATTGGGAGGAAACGGTGAAGGACTACGGGAACGAGCCCGCCATCGCTGCCGGTTTCATCG 32474 ||| |||| | || |||| |||| ||||| ||| || | | ||||||| |||| Sbjct 418258 TGTGGAAGGAGGAGCTGGAGGATTACGACAACGAACCCACCGTGGTCGCCGGTTGCATCC 418317 Query 32475 CCGGCATGAAGAAGGCTCGCTTCAACAACAAGGACTTCGGCGTCATCTCGATCGACA 32531 |||| | |||||| | |||| ||||| | |||||||| || ||| || | |||| Sbjct 418318 TCGGCTTCAAGAAGACCCGCTACAACAGCCGCGACTTCGGTGTGATCGCGCTGGACA 418374 Score = 84.2 bits (92), Expect = 9e-12 Identities = 145/207 (70%), Gaps = 9/207 (4%) Strand=Plus/Plus Query 53275 CAGGGGTTCATGCTGCACGACTACTTCTTCGCCAAGACCATCGACCGCGTGAAACCGGGC 53334 || || |||||| | |||||||||||||||||||| | | || ||| |||||| Sbjct 432750 CAAGGCTTCATGATCCACGACTACTTCTTCGCCAAATCGCTTGATGCGGTGCGGCCGGGC 432809 Query 53335 GGCATGCTCGTGTTCGTCACCAGCAAGGGCACGATGGACAA---GGCGAGCGACCGCGCG 53391 ||| ||||| ||||| ||||| || |||||| |||| || ||| ||||| || Sbjct 432810 GGCCTGCTCATGTTCATCACCTCTGCCGGGACGATGAACAAGCTGGACAGC-ACCGCTCG 432868 Query 53392 CGCCGTTACCTCGCCGACCGCGCGAACCTGATCGGCGCCATGCGCCTGCCGCAGACCGCG 53451 ||| || || || || || || | ||| |||| ||| | | ||||| | || || Sbjct 432869 GGCC--TATCTGGCGGATCGTGCCGATCTGGTCGGTGCCGTCAGGCTGCCAAACACGGCT 432926 Query 53452 TTCAAGGACAACGCCGGCACGGAAGTC 53478 |||||||| || |||||| || ||| Sbjct 432927 TTCAAGGAAAA---CGGCACCGAGGTC 432950 >seq4461 Length=107335 Score = 134 bits (148), Expect = 6e-27 Identities = 234/337 (69%), Gaps = 5/337 (1%) Strand=Plus/Minus Query 10130 GGAGGGAATAATGGCAAGCGTAAACAAGGTAATTTTGGTTGGAAACTTAGGGGCCGATCC 10189 |||| |||| ||| | ||||||||||| ||| |||| || || | ||| ||||| Sbjct 84289 GGAGAGAATCATGCGTGGTGTAAACAAGGTCATTCTGGTCGGCAATCTGGGGCGTGATCC 84230 Query 10190 TGAAGTCCGTTACCTGCCGAGCGGCGACGCGGTTGCGAACATCCGTCTCGCGACGACCGA 10249 ||||||||||| |||||| ||||| |||||| || || || | || || | ||| Sbjct 84229 CGAAGTCCGTTATCTGCCGTCCGGCGGCGCGGTCGCCAATGTCACCGTGGCTACCAGCGA 84170 Query 10250 TCGATACAAGGACAAGGCGAGCGGCGACATCAAGGAGGCGACTGAATGGCACCGCGTCTC 10309 | | ||||||| | ||| | ||| ||||| ||| |||||||| ||||| Sbjct 84169 GAGCTGGCGGGACAAGAATACCGGAGCCATGCAGGAGCAGACGGAATGGCATCGCGTGGT 84110 Query 10310 GTTCTTCGGTCGGCTGGCTGAGATCGTCGACGAGCACCTGCGCAAGGGCGCATCTGTCTA 10369 |||| |||||| ||||| || |||| || || |||||||||||||| | | || Sbjct 84109 TTTCTACGGTCGCCTGGCGGAAATCGCCGGTGAATACCTGCGCAAGGGCTCCAAGATTTA 84050 Query 10370 CATCGAGGG-GCGCATCAAGACGCGGAAGTGGCAGG---ATCAATCCGGCCAGGATCGTT 10425 ||||||| ||| | | || || |||||||||| | || |||| ||||| || | Sbjct 84049 TCTCGAGGGCTCGC-TGCATACCCGCAAGTGGCAGGACAAGCAGACCGGGCAGGACCGCT 83991 Query 10426 ACACGACCGAGATCGTCGCTGACCGCATGCAGATGCT 10462 ||| ||||||||| | | |||||||||||| Sbjct 83990 ACAGCACCGAGATCAAGGGCAGCACCATGCAGATGCT 83954 >seq10932 Length=55943 Score = 96.9 bits (106), Expect = 1e-15 Identities = 191/279 (68%), Gaps = 8/279 (3%) Strand=Plus/Plus Query 25575 CGCGGCGGCACGATCCACCGCCTGCACATCTCCGAGTTCGGGAAAATCTGCGCCAAGTAC 25634 || ||||||||| | || |||||||| |||| |||||||| || || ||| ||||||| Sbjct 29218 CGTGGCGGCACGCTACAGCGCCTGCATGTCTCGGAGTTCGGCAAGATTTGCCGCAAGTAC 29277 Query 25635 CCGGACAAGGCGGCCGAAGTGGTGACGGGCTCCATCCCGGCCGTGCCGAAGTCGGGCATT 25694 |||||||| || || | ||||| ||| || || ||| || | || ||||| | Sbjct 29278 CCGGACAAAGCCAAGGAGATCGTGACTGGCGCCTTCGAGGCGGT---GGGGTTGGGCAAT 29334 Query 25695 CTGGTCA---TCGAGTCGACGGCCGAGGGCCGCGAGGGCGAGTTCTACAAC-ATCACGAT 25750 | | | | | || ||||| || || || ||||||||| | |||| | || | |||| Sbjct 29335 CAGTTGACGCTGGAATCGACAGCAGAAGGGCGCGAGGGCTACTTCTTCGACTACTGCGAT 29394 Query 25751 GCAGGCCGAGGCGATCGCGCAGGCCGGCAAGCCGCTCACGGCCCGCGACTACCGATTCCA 25810 | | || || | | | |||||||||| | || || |||| || ||||| Sbjct 29395 G-ACGCACAGAAGCTGCTGGCGGCCGGCAAGGTACCGACAGCGATGGACTTCCAGTTCCA 29453 Query 25811 CTTCTTCCCGTGGTGGCAGGCGCCCGAGTACCGGATGGA 25849 || ||||||||| |||| ||||| |||| | |||| Sbjct 29454 TTTTTTCCCGTGGCACCAGGAGCCCGCCTACCAGTTGGA 29492 >seq50 Length=481860 Score = 89.7 bits (98), Expect = 2e-13 Identities = 198/295 (67%), Gaps = 4/295 (1%) Strand=Plus/Plus Query 10152 AACAAGGTAATTTTGGTTGGAAACTTAGGGGCC--GATCCTGAAGTCCGTTACCTGCCGA 10209 ||||| || ||||| | || || | ||||| ||||| ||||||||||| ||||| Sbjct 154665 AACAAAGTCATTTTAATCGGTAATCT--GGGCCAGGATCCGGAAGTCCGTTATATGCCGC 154722 Query 10210 GCGGCGACGCGGTTGCGAACATCCGTCTCGCGACGACCGATCGATACAAGGACAAGGCGA 10269 |||| ||| || || ||| | | | ||||| | || | | || || || || | Sbjct 154723 AGGGCGGCGCCGTCGCTAACCTGAGCATTGCGACCTCTGAAAGCTGGAAAGATAAAGCTA 154782 Query 10270 GCGGCGACATCAAGGAGGCGACTGAATGGCACCGCGTCTCGTTCTTCGGTCGGCTGGCTG 10329 |||||| || || ||| || ||||||||||| ||| | | | || ||||| | Sbjct 154783 CCGGCGAAATGAAAGAGCAAACCGAATGGCACCGGGTCGTAATTTACCAGCGTCTGGCAG 154842 Query 10330 AGATCGTCGACGAGCACCTGCGCAAGGGCGCATCTGTCTACATCGAGGGGCGCATCAAGA 10389 | || | || ||| | ||||| || ||| | || || ||||| || | || | Sbjct 154843 AAATTGCCGGCGAATATCTGCGTAAAGGCTCTAAGGTGTATATCGAAGGCAAGCTGAAAA 154902 Query 10390 CGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGTTACACGACCGAGATCGTCGC 10444 | || |||||||||||||| ||| || |||||||| ||||| ||||| || Sbjct 154903 CCCGTAAGTGGCAGGATCAGCAAGGCGTAGAGCGTTACACCACCGAAATCGTTGC 154957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 203848834529028